RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 GATD1Q8NB37 220 aa12.14□□□□□ -0.47
LINC00887-203ENST00000429578 C18orf15Q96N68 181 aa12.14□□□□□ -0.47
LINC00887-203ENST00000429578 TMEM191AQ9H0A3 160 aa12.14□□□□□ -0.47
LINC00887-203ENST00000429578 U3KQK5 164 aa12.14□□□□□ -0.47
LINC00887-203ENST00000429578 TRGV2A0A075B6R0 118 aa12.13□□□□□ -0.47
LINC00887-203ENST00000429578 COLCA2A8K830 154 aa12.13□□□□□ -0.47
LINC00887-203ENST00000429578 C14orf178Q8N769 122 aaPredicted RBP12.13□□□□□ -0.47
LINC00887-203ENST00000429578 POM121L12Q8N7R1 296 aa12.13□□□□□ -0.47
LINC00887-203ENST00000429578 RS1O15537 224 aa12.12□□□□□ -0.47
LINC00887-203ENST00000429578 COX19Q49B96 90 aa12.12□□□□□ -0.47
LINC00887-203ENST00000429578 CFAP126Q5VTH2 177 aa12.12□□□□□ -0.47
LINC00887-203ENST00000429578 TRAV4A0A0B4J268 109 aa12.11□□□□□ -0.47
LINC00887-203ENST00000429578 CRYGDP07320 174 aa12.11□□□□□ -0.47
LINC00887-203ENST00000429578 SMIM17P0DL12 118 aa12.11□□□□□ -0.47
LINC00887-203ENST00000429578 DAD1P61803 113 aa12.11□□□□□ -0.47
LINC00887-203ENST00000429578 OR4C5Q8NGB2 326 aa12.11□□□□□ -0.47
LINC00887-203ENST00000429578 GNB1LQ9BYB4 327 aa12.11□□□□□ -0.47
LINC00887-203ENST00000429578 SAMD10Q9BYL1 202 aa12.11□□□□□ -0.47
LINC00887-203ENST00000429578 DPH3P1Q9H4G8 78 aa12.11□□□□□ -0.47
LINC00887-203ENST00000429578 KIF25-AS1Q9Y6Z4 181 aa12.11□□□□□ -0.47
LINC00887-203ENST00000429578 A0A087WWL8 130 aa12.11□□□□□ -0.47
LINC00887-203ENST00000429578 RAB4BP61018 213 aa12.11□□□□□ -0.47
LINC00887-203ENST00000429578 FAM74A4Q5TZK3 123 aa12.11□□□□□ -0.47
LINC00887-203ENST00000429578 TMEM136Q6ZRR5 245 aa12.11□□□□□ -0.47
LINC00887-203ENST00000429578 UFSP1Q6NVU6 142 aa12.1□□□□□ -0.47
LINC00887-203ENST00000429578 RHODO00212 210 aa12.09□□□□□ -0.47
LINC00887-203ENST00000429578 CIDEAO60543 219 aa12.09□□□□□ -0.47
LINC00887-203ENST00000429578 LINC00315P59091 139 aa12.09□□□□□ -0.47
LINC00887-203ENST00000429578 ZFP2Q6ZN57 461 aa12.09□□□□□ -0.47
LINC00887-203ENST00000429578 C11orf45Q8TAV5 145 aa12.09□□□□□ -0.47
LINC00887-203ENST00000429578 ZNF479Q96JC4 524 aa12.09□□□□□ -0.47
LINC00887-203ENST00000429578 STAB2Q8WWQ8 2551 aa12.09□□□□□ -0.47
LINC00887-203ENST00000429578 KMT2CQ8NEZ4 4911 aaKnown RBP12.09□□□□□ -0.47
LINC00887-203ENST00000429578 HLA-DQA1P01909 254 aa12.08□□□□□ -0.47
LINC00887-203ENST00000429578 MT-ND6P03923 174 aa12.08□□□□□ -0.47
LINC00887-203ENST00000429578 C12orf74Q32Q52 190 aa12.08□□□□□ -0.47
LINC00887-203ENST00000429578 FAM104BQ5XKR9 115 aa12.08□□□□□ -0.47
LINC00887-203ENST00000429578 AMN1Q8IY45 258 aa12.08□□□□□ -0.47
LINC00887-203ENST00000429578 IGHV3-53P01767 116 aa12.08□□□□□ -0.48
LINC00887-203ENST00000429578 IGHV3-73A0A0B4J1V6 119 aa12.07□□□□□ -0.48
LINC00887-203ENST00000429578 RAB4AP20338 218 aa12.07□□□□□ -0.48
LINC00887-203ENST00000429578 RAB5AP20339 215 aa12.07□□□□□ -0.48
LINC00887-203ENST00000429578 RNF185Q96GF1 192 aa12.07□□□□□ -0.48
LINC00887-203ENST00000429578 ATP5G1P05496 136 aa12.06□□□□□ -0.48
LINC00887-203ENST00000429578 MGPP08493 103 aa12.06□□□□□ -0.48
LINC00887-203ENST00000429578 EDA2RQ9HAV5 297 aa12.06□□□□□ -0.48
LINC00887-203ENST00000429578 SLAQ13239 276 aa12.06□□□□□ -0.48
LINC00887-203ENST00000429578 ZNF56Q15929 161 aa12.06□□□□□ -0.48
LINC00887-203ENST00000429578 TRAPPC1Q9Y5R8 145 aa12.06□□□□□ -0.48
LINC00887-203ENST00000429578 F5H697 171 aa12.05□□□□□ -0.48
LINC00887-203ENST00000429578 RPS10P46783 165 aaKnown RBP12.05□□□□□ -0.48
LINC00887-203ENST00000429578 NANOS2P60321 138 aaKnown RBP12.05□□□□□ -0.48
LINC00887-203ENST00000429578 FRZBQ92765 325 aa12.05□□□□□ -0.48
LINC00887-203ENST00000429578 MRPL18Q9H0U6 180 aaKnown RBP12.05□□□□□ -0.48
LINC00887-203ENST00000429578 TRGV4A0A0C4DH28 118 aa12.04□□□□□ -0.48
LINC00887-203ENST00000429578 APCSP02743 223 aa12.04□□□□□ -0.48
LINC00887-203ENST00000429578 FHL2Q14192 279 aa12.04□□□□□ -0.48
LINC00887-203ENST00000429578 MRPL51Q4U2R6 128 aaKnown RBP12.04□□□□□ -0.48
LINC00887-203ENST00000429578 Q6ZTC4 211 aa12.04□□□□□ -0.48
LINC00887-203ENST00000429578 HOXA5P20719 270 aa12.03□□□□□ -0.48
LINC00887-203ENST00000429578 FABP9Q0Z7S8 132 aa12.03□□□□□ -0.48
LINC00887-203ENST00000429578 SUMO4Q6EEV6 95 aa12.03□□□□□ -0.48
LINC00887-203ENST00000429578 Q6ZSN1 163 aa12.03□□□□□ -0.48
LINC00887-203ENST00000429578 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.03□□□□□ -0.48
LINC00887-203ENST00000429578 MRAP2Q96G30 205 aa12.03□□□□□ -0.48
LINC00887-203ENST00000429578 TRAV26-2A0A0B4J265 109 aa12.02□□□□□ -0.49
LINC00887-203ENST00000429578 GATA1P15976 413 aaPredicted RBP12.02□□□□□ -0.49
LINC00887-203ENST00000429578 HHLA3Q9XRX5 114 aa12.01□□□□□ -0.49
LINC00887-203ENST00000429578 TRBV6-4A0A1B0GX49 114 aa12□□□□□ -0.49
LINC00887-203ENST00000429578 D6R8Y8 96 aa12□□□□□ -0.49
LINC00887-203ENST00000429578 F5H768 121 aa12□□□□□ -0.49
LINC00887-203ENST00000429578 M0QY20 66 aa12□□□□□ -0.49
LINC00887-203ENST00000429578 PPBPP02775 128 aa12□□□□□ -0.49
LINC00887-203ENST00000429578 TRGC2P03986 189 aa12□□□□□ -0.49
LINC00887-203ENST00000429578 HTN3P15516 51 aa12□□□□□ -0.49
LINC00887-203ENST00000429578 CKS2P33552 79 aa12□□□□□ -0.49
LINC00887-203ENST00000429578 KIAA1644Q3SXP7 199 aa12□□□□□ -0.49
LINC00887-203ENST00000429578 SLC25A29Q8N8R3 303 aa12□□□□□ -0.49
LINC00887-203ENST00000429578 H7C1H1 209 aa12□□□□□ -0.49
LINC00887-203ENST00000429578 ORMDL3Q8N138 153 aa12□□□□□ -0.49
LINC00887-203ENST00000429578 PRO0255Q9UI72 69 aa12□□□□□ -0.49
LINC00887-203ENST00000429578 SMKR1H3BMG3 65 aa11.99□□□□□ -0.49
LINC00887-203ENST00000429578 C3orf84H3BNL1 204 aa11.99□□□□□ -0.49
LINC00887-203ENST00000429578 K7EQD1 137 aa11.99□□□□□ -0.49
LINC00887-203ENST00000429578 GAS8-AS1O95177 125 aa11.99□□□□□ -0.49
LINC00887-203ENST00000429578 NCR2O95944 276 aa11.99□□□□□ -0.49
LINC00887-203ENST00000429578 CRYBA4P53673 196 aa11.99□□□□□ -0.49
LINC00887-203ENST00000429578 RYR3Q15413 4870 aa11.98□□□□□ -0.49
LINC00887-203ENST00000429578 DEFB131BA0A096LNP1 70 aa11.98□□□□□ -0.49
LINC00887-203ENST00000429578 TRAV10A0A0B4J240 114 aa11.97□□□□□ -0.49
LINC00887-203ENST00000429578 RHOHQ15669 191 aa11.97□□□□□ -0.49
LINC00887-203ENST00000429578 TRBV10-1A0A0K0K1A3 114 aa11.97□□□□□ -0.49
LINC00887-203ENST00000429578 PHOX2AO14813 284 aa11.97□□□□□ -0.49
LINC00887-203ENST00000429578 PPP1R17O96001 155 aa11.97□□□□□ -0.49
LINC00887-203ENST00000429578 P0DMU3 169 aa11.97□□□□□ -0.49
LINC00887-203ENST00000429578 FAM231AP0DMU4 169 aa11.97□□□□□ -0.49
LINC00887-203ENST00000429578 FAM231CP0DMU5 169 aa11.97□□□□□ -0.49
LINC00887-203ENST00000429578 NRACQ8N912 160 aa11.97□□□□□ -0.49
LINC00887-203ENST00000429578 MUC7Q8TAX7 377 aa11.97□□□□□ -0.49
LINC00887-203ENST00000429578 PRELID3AQ96N28 172 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms