RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 H7C1H1 209 aa10.18□□□□□ -0.78
THBS3-202ENST00000428962 PTTG1IPP53801 180 aa10.18□□□□□ -0.78
THBS3-202ENST00000428962 TCTAP57738 103 aa10.18□□□□□ -0.78
THBS3-202ENST00000428962 LINC00315P59091 139 aa10.18□□□□□ -0.78
THBS3-202ENST00000428962 UBE2V1Q13404 147 aa10.18□□□□□ -0.78
THBS3-202ENST00000428962 SPINK13Q1W4C9 94 aa10.18□□□□□ -0.78
THBS3-202ENST00000428962 ZC2HC1BQ5TFG8 222 aa10.18□□□□□ -0.78
THBS3-202ENST00000428962 PCP2Q8IVA1 136 aa10.18□□□□□ -0.78
THBS3-202ENST00000428962 TMEM160Q9NX00 188 aa10.18□□□□□ -0.78
THBS3-202ENST00000428962 TRGV11A0A075B6L2 103 aa10.17□□□□□ -0.78
THBS3-202ENST00000428962 TRAV12-2A0A075B6T6 113 aa10.17□□□□□ -0.78
THBS3-202ENST00000428962 F8VRH5 84 aa10.17□□□□□ -0.78
THBS3-202ENST00000428962 SLURP1P55000 103 aa10.17□□□□□ -0.78
THBS3-202ENST00000428962 CCDC168Q8NDH2 2452 aa10.17□□□□□ -0.78
THBS3-202ENST00000428962 VAMP3Q15836 100 aa10.17□□□□□ -0.78
THBS3-202ENST00000428962 SUMO4Q6EEV6 95 aa10.17□□□□□ -0.78
THBS3-202ENST00000428962 C2orf66Q6UXQ4 117 aa10.17□□□□□ -0.78
THBS3-202ENST00000428962 Q6ZVH6 145 aa10.17□□□□□ -0.78
THBS3-202ENST00000428962 HIGD1BQ9P298 99 aa10.17□□□□□ -0.78
THBS3-202ENST00000428962 VPS13CQ709C8 3753 aa10.16□□□□□ -0.78
THBS3-202ENST00000428962 F5H697 171 aa10.16□□□□□ -0.78
THBS3-202ENST00000428962 AMTNQ6UX39 209 aa10.16□□□□□ -0.78
THBS3-202ENST00000428962 ADAMTSL5Q6ZMM2 481 aa10.16□□□□□ -0.78
THBS3-202ENST00000428962 GTSCR1Q86UQ5 136 aa10.16□□□□□ -0.78
THBS3-202ENST00000428962 Q8N1Y9 231 aa10.16□□□□□ -0.78
THBS3-202ENST00000428962 KIR2DL4Q99706 377 aa10.16□□□□□ -0.78
THBS3-202ENST00000428962 A0A087WWL8 130 aa10.15□□□□□ -0.78
THBS3-202ENST00000428962 VCYO14598 125 aa10.15□□□□□ -0.78
THBS3-202ENST00000428962 DEFB136Q30KP8 78 aa10.15□□□□□ -0.78
THBS3-202ENST00000428962 KHDC1LQ5JSQ8 128 aa10.15□□□□□ -0.78
THBS3-202ENST00000428962 ERASQ7Z444 233 aa10.15□□□□□ -0.78
THBS3-202ENST00000428962 CYSLTR1Q9Y271 337 aa10.15□□□□□ -0.78
THBS3-202ENST00000428962 CHTOPQ9Y3Y2 248 aaKnown RBP10.15□□□□□ -0.78
THBS3-202ENST00000428962 OTOGQ6ZRI0 2925 aa10.15□□□□□ -0.78
THBS3-202ENST00000428962 IGKV2D-26A0A0A0MRZ7 120 aa10.14□□□□□ -0.79
THBS3-202ENST00000428962 TRBV6-5A0A0K0K1A5 114 aa10.14□□□□□ -0.79
THBS3-202ENST00000428962 NEXN-AS1Q8NBZ9 246 aa10.14□□□□□ -0.79
THBS3-202ENST00000428962 OR11H1Q8NG94 326 aa10.14□□□□□ -0.79
THBS3-202ENST00000428962 RNASE8Q8TDE3 154 aaKnown RBP10.14□□□□□ -0.79
THBS3-202ENST00000428962 MDFICQ9P1T7 246 aa10.14□□□□□ -0.79
THBS3-202ENST00000428962 CBY3A6NI87 242 aa10.14□□□□□ -0.79
THBS3-202ENST00000428962 CCL25O15444 150 aa10.14□□□□□ -0.79
THBS3-202ENST00000428962 C18orf65Q6ZTR6 163 aa10.14□□□□□ -0.79
THBS3-202ENST00000428962 DYNLRB2Q8TF09 96 aa10.14□□□□□ -0.79
THBS3-202ENST00000428962 JPT2Q9H910 190 aa10.14□□□□□ -0.79
THBS3-202ENST00000428962 MUC4Q99102 2169 aa10.14□□□□□ -0.79
THBS3-202ENST00000428962 A8MTW9 85 aa10.13□□□□□ -0.79
THBS3-202ENST00000428962 POLR2KP53803 58 aaKnown RBP10.13□□□□□ -0.79
THBS3-202ENST00000428962 DEFB131AP59861 70 aa10.13□□□□□ -0.79
THBS3-202ENST00000428962 ZNF56Q15929 161 aa10.13□□□□□ -0.79
THBS3-202ENST00000428962 FAM74A4Q5TZK3 123 aa10.13□□□□□ -0.79
THBS3-202ENST00000428962 KLHL30-AS1Q8NEE0 82 aa10.13□□□□□ -0.79
THBS3-202ENST00000428962 BAALCQ8WXS3 180 aa10.13□□□□□ -0.79
THBS3-202ENST00000428962 ZFHX3Q15911 3703 aa10.13□□□□□ -0.79
THBS3-202ENST00000428962 H3BRM9 83 aa10.12□□□□□ -0.79
THBS3-202ENST00000428962 CHAC1Q9BUX1 264 aa10.12□□□□□ -0.79
THBS3-202ENST00000428962 TRBV27A0A0K0K1C4 114 aa10.12□□□□□ -0.79
THBS3-202ENST00000428962 SDHAF1A6NFY7 115 aa10.12□□□□□ -0.79
THBS3-202ENST00000428962 ZFP2Q6ZN57 461 aa10.12□□□□□ -0.79
THBS3-202ENST00000428962 TRPT1Q86TN4 253 aaKnown RBP10.12□□□□□ -0.79
THBS3-202ENST00000428962 TMEM141Q96I45 108 aa10.12□□□□□ -0.79
THBS3-202ENST00000428962 KNCNA6PVL3 124 aa10.11□□□□□ -0.79
THBS3-202ENST00000428962 H3BMM0 161 aa10.11□□□□□ -0.79
THBS3-202ENST00000428962 TMEM61Q8N0U2 210 aa10.11□□□□□ -0.79
THBS3-202ENST00000428962 OR4C5Q8NGB2 326 aa10.11□□□□□ -0.79
THBS3-202ENST00000428962 JMJD8Q96S16 334 aa10.11□□□□□ -0.79
THBS3-202ENST00000428962 TP53TG1Q9Y2A0 90 aa10.11□□□□□ -0.79
THBS3-202ENST00000428962 ZNF256Q9Y2P7 627 aaPredicted RBP10.11□□□□□ -0.79
THBS3-202ENST00000428962 TRBV25-1A0A075B6N4 114 aa10.1□□□□□ -0.79
THBS3-202ENST00000428962 DNAJC9-AS1A6NH13 148 aa10.1□□□□□ -0.79
THBS3-202ENST00000428962 CRYGDP07320 174 aa10.1□□□□□ -0.79
THBS3-202ENST00000428962 RIPPLY3P57055 190 aa10.1□□□□□ -0.79
THBS3-202ENST00000428962 PAPPA-AS1Q5QFB9 102 aa10.1□□□□□ -0.79
THBS3-202ENST00000428962 Q6ZSV7 163 aa10.1□□□□□ -0.79
THBS3-202ENST00000428962 NEGR1Q7Z3B1 354 aa10.1□□□□□ -0.79
THBS3-202ENST00000428962 WFDC11Q8NEX6 87 aa10.1□□□□□ -0.79
THBS3-202ENST00000428962 OR11H12B2RN74 326 aa10.1□□□□□ -0.79
THBS3-202ENST00000428962 M0QY20 66 aa10.1□□□□□ -0.79
THBS3-202ENST00000428962 RHOHQ15669 191 aa10.1□□□□□ -0.79
THBS3-202ENST00000428962 ZNF876PQ49A33 203 aa10.1□□□□□ -0.79
THBS3-202ENST00000428962 OR11H2Q8NH07 326 aa10.1□□□□□ -0.79
THBS3-202ENST00000428962 DLX4Q92988 240 aaPredicted RBP10.1□□□□□ -0.79
THBS3-202ENST00000428962 TIMM17AQ99595 171 aa10.1□□□□□ -0.79
THBS3-202ENST00000428962 AKAP9Q99996 3911 aa10.09□□□□□ -0.79
THBS3-202ENST00000428962 TRAV8-6A0A0B4J262 113 aa10.09□□□□□ -0.79
THBS3-202ENST00000428962 PRSS29PA6NIE9 313 aa10.09□□□□□ -0.79
THBS3-202ENST00000428962 TAL2Q16559 108 aa10.09□□□□□ -0.79
THBS3-202ENST00000428962 DUX3Q96PT4 197 aa10.09□□□□□ -0.79
THBS3-202ENST00000428962 SPAG8Q99932 426 aaPredicted RBP10.09□□□□□ -0.79
THBS3-202ENST00000428962 C9orf118A6NHY6 69 aa10.08□□□□□ -0.8
THBS3-202ENST00000428962 NSUN5P1Q3KNT7 163 aa10.08□□□□□ -0.8
THBS3-202ENST00000428962 PIK3CD-AS1Q5SR53 167 aa10.08□□□□□ -0.8
THBS3-202ENST00000428962 RAX2Q96IS3 184 aa10.08□□□□□ -0.8
THBS3-202ENST00000428962 TTTY13Q9BZ97 58 aa10.08□□□□□ -0.8
THBS3-202ENST00000428962 MAP6D1Q9H9H5 199 aa10.08□□□□□ -0.8
THBS3-202ENST00000428962 F8P00451 2351 aa10.08□□□□□ -0.8
THBS3-202ENST00000428962 MAP1AP78559 2803 aaPredicted RBP10.08□□□□□ -0.8
THBS3-202ENST00000428962 IGIPA6NJ69 53 aa10.07□□□□□ -0.8
THBS3-202ENST00000428962 GCSHP23434 173 aa10.07□□□□□ -0.8
THBS3-202ENST00000428962 ZNF415Q09FC8 603 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms