RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 FAM231DQ6ZW35 169 aa10.15□□□□□ -0.79
SGCE-204ENST00000428696 C14orf178Q8N769 122 aaPredicted RBP10.15□□□□□ -0.79
SGCE-204ENST00000428696 SLC25A29Q8N8R3 303 aa10.15□□□□□ -0.79
SGCE-204ENST00000428696 OR10G8Q8NGN5 311 aa10.15□□□□□ -0.79
SGCE-204ENST00000428696 ISOC2Q96AB3 205 aa10.15□□□□□ -0.79
SGCE-204ENST00000428696 SSBP4Q9BWG4 385 aaPredicted RBP10.15□□□□□ -0.79
SGCE-204ENST00000428696 MSRB1Q9NZV6 116 aa10.15□□□□□ -0.79
SGCE-204ENST00000428696 H3BNG1 76 aa10.14□□□□□ -0.79
SGCE-204ENST00000428696 IGLC6P0CF74 106 aa10.14□□□□□ -0.79
SGCE-204ENST00000428696 SRIP30626 198 aa10.14□□□□□ -0.79
SGCE-204ENST00000428696 CACNG7P62955 275 aa10.14□□□□□ -0.79
SGCE-204ENST00000428696 ZNF56Q15929 161 aa10.14□□□□□ -0.79
SGCE-204ENST00000428696 MRPL23Q16540 153 aaKnown RBP10.14□□□□□ -0.79
SGCE-204ENST00000428696 BORCS7Q96B45 105 aa10.14□□□□□ -0.79
SGCE-204ENST00000428696 OSTCQ9NRP0 149 aa10.14□□□□□ -0.79
SGCE-204ENST00000428696 PLECQ15149 4684 aaKnown RBP10.14□□□□□ -0.79
SGCE-204ENST00000428696 RHODO00212 210 aa10.13□□□□□ -0.79
SGCE-204ENST00000428696 MGPP08493 103 aa10.13□□□□□ -0.79
SGCE-204ENST00000428696 NTF3P20783 257 aa10.13□□□□□ -0.79
SGCE-204ENST00000428696 ZFP2Q6ZN57 461 aa10.13□□□□□ -0.79
SGCE-204ENST00000428696 GTSF1Q8WW33 167 aa10.13□□□□□ -0.79
SGCE-204ENST00000428696 K7EQD1 137 aa10.12□□□□□ -0.79
SGCE-204ENST00000428696 CRYGDP07320 174 aa10.12□□□□□ -0.79
SGCE-204ENST00000428696 RHOHQ15669 191 aa10.12□□□□□ -0.79
SGCE-204ENST00000428696 UQCC3Q6UW78 93 aa10.12□□□□□ -0.79
SGCE-204ENST00000428696 AP1S3Q96PC3 154 aa10.12□□□□□ -0.79
SGCE-204ENST00000428696 TRBV6-4A0A1B0GX49 114 aa10.11□□□□□ -0.79
SGCE-204ENST00000428696 GAGE12JA6NER3 117 aa10.11□□□□□ -0.79
SGCE-204ENST00000428696 F8W036 122 aa10.11□□□□□ -0.79
SGCE-204ENST00000428696 GAGE1Q13065 139 aa10.11□□□□□ -0.79
SGCE-204ENST00000428696 GAGE4Q13068 117 aa10.11□□□□□ -0.79
SGCE-204ENST00000428696 GAGE5Q13069 117 aa10.11□□□□□ -0.79
SGCE-204ENST00000428696 ESRGQ1W209 222 aa10.11□□□□□ -0.79
SGCE-204ENST00000428696 GAGE13Q4V321 117 aa10.11□□□□□ -0.79
SGCE-204ENST00000428696 NEGR1Q7Z3B1 354 aa10.11□□□□□ -0.79
SGCE-204ENST00000428696 TSKUQ8WUA8 353 aa10.11□□□□□ -0.79
SGCE-204ENST00000428696 IGLV2-18A0A075B6J9 118 aa10.1□□□□□ -0.79
SGCE-204ENST00000428696 NXPH4O95158 308 aa10.1□□□□□ -0.79
SGCE-204ENST00000428696 EVI2AP22794 236 aa10.1□□□□□ -0.79
SGCE-204ENST00000428696 SMIM15Q7Z3B0 74 aa10.1□□□□□ -0.79
SGCE-204ENST00000428696 LINC00588Q9Y4M8 146 aa10.1□□□□□ -0.79
SGCE-204ENST00000428696 V9GYV3 84 aa10.1□□□□□ -0.79
SGCE-204ENST00000428696 TMEM218A2RU14 115 aa10.09□□□□□ -0.79
SGCE-204ENST00000428696 HIGD1CA8MV81 97 aa10.09□□□□□ -0.79
SGCE-204ENST00000428696 M0R2N4 97 aa10.09□□□□□ -0.79
SGCE-204ENST00000428696 TRGC1P0CF51 173 aa10.09□□□□□ -0.79
SGCE-204ENST00000428696 CTRLP40313 264 aa10.09□□□□□ -0.79
SGCE-204ENST00000428696 RNF212Q495C1 297 aa10.09□□□□□ -0.79
SGCE-204ENST00000428696 CT83Q5H943 113 aa10.09□□□□□ -0.79
SGCE-204ENST00000428696 UFSP1Q6NVU6 142 aa10.09□□□□□ -0.79
SGCE-204ENST00000428696 LINC00862A6NCI5 91 aa10.08□□□□□ -0.8
SGCE-204ENST00000428696 RAB4BP61018 213 aa10.08□□□□□ -0.8
SGCE-204ENST00000428696 WDR73Q6P4I2 378 aa10.08□□□□□ -0.8
SGCE-204ENST00000428696 Q9UF83 564 aa10.08□□□□□ -0.8
SGCE-204ENST00000428696 KMT2CQ8NEZ4 4911 aaKnown RBP10.08□□□□□ -0.8
SGCE-204ENST00000428696 LYPD5Q6UWN5 251 aa10.07□□□□□ -0.8
SGCE-204ENST00000428696 ALMS1Q8TCU4 4167 aa10.07□□□□□ -0.8
SGCE-204ENST00000428696 LYSTQ99698 3801 aa10.07□□□□□ -0.8
SGCE-204ENST00000428696 A0A1B0GUT8 65 aa10.07□□□□□ -0.8
SGCE-204ENST00000428696 MT-ND4LP03901 98 aa10.07□□□□□ -0.8
SGCE-204ENST00000428696 FOXA3P55318 350 aaPredicted RBP10.07□□□□□ -0.8
SGCE-204ENST00000428696 PNRC1Q12796 327 aaPredicted RBP10.07□□□□□ -0.8
SGCE-204ENST00000428696 SH2D6Q7Z4S9 175 aa10.07□□□□□ -0.8
SGCE-204ENST00000428696 ATP6V0E2Q8NHE4 81 aa10.07□□□□□ -0.8
SGCE-204ENST00000428696 ZNRF2Q8NHG8 242 aa10.07□□□□□ -0.8
SGCE-204ENST00000428696 GFRA4Q9GZZ7 299 aa10.07□□□□□ -0.8
SGCE-204ENST00000428696 NAT8BQ9UHF3 227 aa10.07□□□□□ -0.8
SGCE-204ENST00000428696 C4orf48Q5BLP8 95 aa10.06□□□□□ -0.8
SGCE-204ENST00000428696 NUP35Q8NFH5 326 aa10.06□□□□□ -0.8
SGCE-204ENST00000428696 DPH3P1Q9H4G8 78 aa10.06□□□□□ -0.8
SGCE-204ENST00000428696 KIF25-AS1Q9Y6Z4 181 aa10.06□□□□□ -0.8
SGCE-204ENST00000428696 DNAH1Q9P2D7 4330 aa10.05□□□□□ -0.8
SGCE-204ENST00000428696 PPP1R2P9O14990 202 aa10.05□□□□□ -0.8
SGCE-204ENST00000428696 RPL36AP83881 106 aaKnown RBP10.05□□□□□ -0.8
SGCE-204ENST00000428696 RIGQ13278 110 aa10.05□□□□□ -0.8
SGCE-204ENST00000428696 RPL36ALQ969Q0 106 aaKnown RBP10.05□□□□□ -0.8
SGCE-204ENST00000428696 FAM231BA6NCW3 169 aa10.04□□□□□ -0.8
SGCE-204ENST00000428696 ADCYAP1P18509 176 aa10.04□□□□□ -0.8
SGCE-204ENST00000428696 Q9H8V8 135 aa10.04□□□□□ -0.8
SGCE-204ENST00000428696 SMIM27A0A1W2PRY6 76 aa10.03□□□□□ -0.8
SGCE-204ENST00000428696 CAMPP49913 170 aa10.03□□□□□ -0.8
SGCE-204ENST00000428696 FAM3BP58499 235 aaPredicted RBP10.03□□□□□ -0.8
SGCE-204ENST00000428696 LINC00315P59091 139 aa10.03□□□□□ -0.8
SGCE-204ENST00000428696 SUMO4Q6EEV6 95 aa10.03□□□□□ -0.8
SGCE-204ENST00000428696 SEC11CQ9BY50 192 aa10.03□□□□□ -0.8
SGCE-204ENST00000428696 CNFNQ9BYD5 112 aa10.03□□□□□ -0.8
SGCE-204ENST00000428696 MRPS16Q9Y3D3 137 aaKnown RBP10.03□□□□□ -0.8
SGCE-204ENST00000428696 TNFRSF18Q9Y5U5 241 aa10.03□□□□□ -0.8
SGCE-204ENST00000428696 TRAV26-2A0A0B4J265 109 aa10.02□□□□□ -0.81
SGCE-204ENST00000428696 TRBV10-1A0A0K0K1A3 114 aa10.02□□□□□ -0.81
SGCE-204ENST00000428696 H7C1H1 209 aa10.02□□□□□ -0.81
SGCE-204ENST00000428696 OR10J3Q5JRS4 329 aa10.02□□□□□ -0.81
SGCE-204ENST00000428696 MRPL54Q6P161 138 aaKnown RBP10.02□□□□□ -0.81
SGCE-204ENST00000428696 ANAPC16Q96DE5 110 aa10.02□□□□□ -0.81
SGCE-204ENST00000428696 SACSQ9NZJ4 4579 aa10.02□□□□□ -0.81
SGCE-204ENST00000428696 TRBV7-3A0A075B6L6 115 aa10.01□□□□□ -0.81
SGCE-204ENST00000428696 IGHV3-38A0A0C4DH36 116 aa10.01□□□□□ -0.81
SGCE-204ENST00000428696 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.01□□□□□ -0.81
SGCE-204ENST00000428696 GTSF1LQ9H1H1 148 aa10.01□□□□□ -0.81
SGCE-204ENST00000428696 VPS13DQ5THJ4 4388 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms