RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 RASL10AQ92737 203 aa5.64□□□□□ -1.51
HMGA1P4-201ENST00000428643 PTH2Q96A98 100 aa5.64□□□□□ -1.51
HMGA1P4-201ENST00000428643 NDUFAF3Q9BU61 184 aa5.64□□□□□ -1.51
HMGA1P4-201ENST00000428643 KRTAP4-8Q9BYQ9 185 aa5.64□□□□□ -1.51
HMGA1P4-201ENST00000428643 JPT2Q9H910 190 aa5.64□□□□□ -1.51
HMGA1P4-201ENST00000428643 IGHV3-73A0A0B4J1V6 119 aa5.63□□□□□ -1.51
HMGA1P4-201ENST00000428643 TRAV4A0A0B4J268 109 aa5.63□□□□□ -1.51
HMGA1P4-201ENST00000428643 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.63□□□□□ -1.51
HMGA1P4-201ENST00000428643 RHODO00212 210 aa5.63□□□□□ -1.51
HMGA1P4-201ENST00000428643 HTN3P15516 51 aa5.63□□□□□ -1.51
HMGA1P4-201ENST00000428643 EVI2AP22794 236 aa5.63□□□□□ -1.51
HMGA1P4-201ENST00000428643 NANOS2P60321 138 aaKnown RBP5.63□□□□□ -1.51
HMGA1P4-201ENST00000428643 ZNF56Q15929 161 aa5.63□□□□□ -1.51
HMGA1P4-201ENST00000428643 CFAP126Q5VTH2 177 aa5.63□□□□□ -1.51
HMGA1P4-201ENST00000428643 LINC00612Q8N6U2 182 aa5.63□□□□□ -1.51
HMGA1P4-201ENST00000428643 FAM210BQ96KR6 192 aa5.63□□□□□ -1.51
HMGA1P4-201ENST00000428643 SAMD10Q9BYL1 202 aa5.63□□□□□ -1.51
HMGA1P4-201ENST00000428643 TENM3Q9P273 2699 aa5.63□□□□□ -1.51
HMGA1P4-201ENST00000428643 TRBV24-1A0A075B6N3 115 aa5.62□□□□□ -1.51
HMGA1P4-201ENST00000428643 TRGV4A0A0C4DH28 118 aa5.62□□□□□ -1.51
HMGA1P4-201ENST00000428643 F5H697 171 aa5.62□□□□□ -1.51
HMGA1P4-201ENST00000428643 RS1O15537 224 aa5.62□□□□□ -1.51
HMGA1P4-201ENST00000428643 ATP5G1P05496 136 aa5.62□□□□□ -1.51
HMGA1P4-201ENST00000428643 C12orf74Q32Q52 190 aa5.62□□□□□ -1.51
HMGA1P4-201ENST00000428643 RASL11AQ6T310 242 aa5.62□□□□□ -1.51
HMGA1P4-201ENST00000428643 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.62□□□□□ -1.51
HMGA1P4-201ENST00000428643 ZNF479Q96JC4 524 aa5.62□□□□□ -1.51
HMGA1P4-201ENST00000428643 YPEL4Q96NS1 127 aa5.62□□□□□ -1.51
HMGA1P4-201ENST00000428643 DPH3P1Q9H4G8 78 aa5.62□□□□□ -1.51
HMGA1P4-201ENST00000428643 DNAH3Q8TD57 4116 aa5.62□□□□□ -1.51
HMGA1P4-201ENST00000428643 HLA-DQA1P01909 254 aa5.61□□□□□ -1.51
HMGA1P4-201ENST00000428643 Q6ZTC4 211 aa5.61□□□□□ -1.51
HMGA1P4-201ENST00000428643 AMN1Q8IY45 258 aa5.61□□□□□ -1.51
HMGA1P4-201ENST00000428643 POM121L12Q8N7R1 296 aa5.61□□□□□ -1.51
HMGA1P4-201ENST00000428643 FRZBQ92765 325 aa5.61□□□□□ -1.51
HMGA1P4-201ENST00000428643 C18orf15Q96N68 181 aa5.61□□□□□ -1.51
HMGA1P4-201ENST00000428643 TMEM191AQ9H0A3 160 aa5.61□□□□□ -1.51
HMGA1P4-201ENST00000428643 STAB2Q8WWQ8 2551 aa5.61□□□□□ -1.51
HMGA1P4-201ENST00000428643 F5H768 121 aa5.6□□□□□ -1.51
HMGA1P4-201ENST00000428643 MT-ND6P03923 174 aa5.6□□□□□ -1.51
HMGA1P4-201ENST00000428643 CRYGDP07320 174 aa5.6□□□□□ -1.51
HMGA1P4-201ENST00000428643 RAB5AP20339 215 aa5.6□□□□□ -1.51
HMGA1P4-201ENST00000428643 COX19Q49B96 90 aa5.6□□□□□ -1.51
HMGA1P4-201ENST00000428643 SUMO4Q6EEV6 95 aa5.6□□□□□ -1.51
HMGA1P4-201ENST00000428643 ZFP2Q6ZN57 461 aa5.6□□□□□ -1.51
HMGA1P4-201ENST00000428643 TMEM136Q6ZRR5 245 aa5.6□□□□□ -1.51
HMGA1P4-201ENST00000428643 EDA2RQ9HAV5 297 aa5.6□□□□□ -1.51
HMGA1P4-201ENST00000428643 DEFB131BA0A096LNP1 70 aa5.59□□□□□ -1.51
HMGA1P4-201ENST00000428643 TRAV10A0A0B4J240 114 aa5.59□□□□□ -1.51
HMGA1P4-201ENST00000428643 TRAV26-2A0A0B4J265 109 aa5.59□□□□□ -1.51
HMGA1P4-201ENST00000428643 COLCA2A8K830 154 aa5.59□□□□□ -1.51
HMGA1P4-201ENST00000428643 NCR2O95944 276 aa5.59□□□□□ -1.51
HMGA1P4-201ENST00000428643 APCSP02743 223 aa5.59□□□□□ -1.51
HMGA1P4-201ENST00000428643 HOXA5P20719 270 aa5.59□□□□□ -1.51
HMGA1P4-201ENST00000428643 RPS10P46783 165 aaKnown RBP5.59□□□□□ -1.51
HMGA1P4-201ENST00000428643 FAM104BQ5XKR9 115 aa5.59□□□□□ -1.51
HMGA1P4-201ENST00000428643 UFSP1Q6NVU6 142 aa5.59□□□□□ -1.51
HMGA1P4-201ENST00000428643 GATD1Q8NB37 220 aa5.59□□□□□ -1.51
HMGA1P4-201ENST00000428643 MRAP2Q96G30 205 aa5.59□□□□□ -1.51
HMGA1P4-201ENST00000428643 GNB1LQ9BYB4 327 aa5.59□□□□□ -1.51
HMGA1P4-201ENST00000428643 MRPL18Q9H0U6 180 aaKnown RBP5.59□□□□□ -1.51
HMGA1P4-201ENST00000428643 KIF25-AS1Q9Y6Z4 181 aa5.59□□□□□ -1.51
HMGA1P4-201ENST00000428643 D6R8Y8 96 aa5.58□□□□□ -1.52
HMGA1P4-201ENST00000428643 SMKR1H3BMG3 65 aa5.58□□□□□ -1.52
HMGA1P4-201ENST00000428643 H7C1H1 209 aa5.58□□□□□ -1.52
HMGA1P4-201ENST00000428643 K7EQD1 137 aa5.58□□□□□ -1.52
HMGA1P4-201ENST00000428643 CIDEAO60543 219 aa5.58□□□□□ -1.52
HMGA1P4-201ENST00000428643 GATA1P15976 413 aaPredicted RBP5.58□□□□□ -1.52
HMGA1P4-201ENST00000428643 RAB4AP20338 218 aa5.58□□□□□ -1.52
HMGA1P4-201ENST00000428643 CKS2P33552 79 aa5.58□□□□□ -1.52
HMGA1P4-201ENST00000428643 LINC00315P59091 139 aa5.58□□□□□ -1.52
HMGA1P4-201ENST00000428643 FABP9Q0Z7S8 132 aa5.58□□□□□ -1.52
HMGA1P4-201ENST00000428643 SLAQ13239 276 aa5.58□□□□□ -1.52
HMGA1P4-201ENST00000428643 FHL2Q14192 279 aa5.58□□□□□ -1.52
HMGA1P4-201ENST00000428643 MRPL51Q4U2R6 128 aaKnown RBP5.58□□□□□ -1.52
HMGA1P4-201ENST00000428643 Q6ZSN1 163 aa5.58□□□□□ -1.52
HMGA1P4-201ENST00000428643 RNF185Q96GF1 192 aa5.58□□□□□ -1.52
HMGA1P4-201ENST00000428643 PRADC1Q9BSG0 188 aa5.58□□□□□ -1.52
HMGA1P4-201ENST00000428643 HHLA3Q9XRX5 114 aa5.58□□□□□ -1.52
HMGA1P4-201ENST00000428643 TRAPPC1Q9Y5R8 145 aa5.58□□□□□ -1.52
HMGA1P4-201ENST00000428643 TRAV26-1A0A087WT03 109 aa5.57□□□□□ -1.52
HMGA1P4-201ENST00000428643 A0A0J9YY99 117 aa5.57□□□□□ -1.52
HMGA1P4-201ENST00000428643 PAX4O43316 350 aa5.57□□□□□ -1.52
HMGA1P4-201ENST00000428643 RHOHQ15669 191 aa5.57□□□□□ -1.52
HMGA1P4-201ENST00000428643 KIAA1644Q3SXP7 199 aa5.57□□□□□ -1.52
HMGA1P4-201ENST00000428643 OR10J3Q5JRS4 329 aa5.57□□□□□ -1.52
HMGA1P4-201ENST00000428643 ORMDL3Q8N138 153 aa5.57□□□□□ -1.52
HMGA1P4-201ENST00000428643 SLC25A29Q8N8R3 303 aa5.57□□□□□ -1.52
HMGA1P4-201ENST00000428643 PRO0255Q9UI72 69 aa5.57□□□□□ -1.52
HMGA1P4-201ENST00000428643 KMT2CQ8NEZ4 4911 aaKnown RBP5.57□□□□□ -1.52
HMGA1P4-201ENST00000428643 KRTAP9-6A0A140TA67 174 aa5.56□□□□□ -1.52
HMGA1P4-201ENST00000428643 TRBV6-4A0A1B0GX49 114 aa5.56□□□□□ -1.52
HMGA1P4-201ENST00000428643 M0QY20 66 aa5.56□□□□□ -1.52
HMGA1P4-201ENST00000428643 PPBPP02775 128 aa5.56□□□□□ -1.52
HMGA1P4-201ENST00000428643 P0DMU3 169 aa5.56□□□□□ -1.52
HMGA1P4-201ENST00000428643 FAM231AP0DMU4 169 aa5.56□□□□□ -1.52
HMGA1P4-201ENST00000428643 FAM231CP0DMU5 169 aa5.56□□□□□ -1.52
HMGA1P4-201ENST00000428643 GYPEP15421 78 aa5.56□□□□□ -1.52
HMGA1P4-201ENST00000428643 CRYBA4P53673 196 aa5.56□□□□□ -1.52
HMGA1P4-201ENST00000428643 PHLDA1Q8WV24 401 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms