RNA–Protein interactions for RNA: ENST00000427978.6

TRPM4-202, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best) BASIC

Gene TRPM4, Length 3,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-202ENST00000427978 CSMD2Q7Z408 3487 aa10.1□□□□□ -0.79
TRPM4-202ENST00000427978 MYMXA0A1B0GTQ4 84 aa10.1□□□□□ -0.79
TRPM4-202ENST00000427978 A0A1B0GWB2 263 aa10.1□□□□□ -0.79
TRPM4-202ENST00000427978 NDUFA4O00483 81 aa10.1□□□□□ -0.79
TRPM4-202ENST00000427978 SRSF2Q01130 221 aaKnown RBP10.1□□□□□ -0.79
TRPM4-202ENST00000427978 SPINK13Q1W4C9 94 aa10.1□□□□□ -0.79
TRPM4-202ENST00000427978 PIFOQ8TCI5 191 aa10.1□□□□□ -0.79
TRPM4-202ENST00000427978 OPRPNQ99935 248 aaPredicted RBP10.1□□□□□ -0.79
TRPM4-202ENST00000427978 BAALCQ8WXS3 180 aa10.1□□□□□ -0.79
TRPM4-202ENST00000427978 KIR2DL4Q99706 377 aa10.1□□□□□ -0.79
TRPM4-202ENST00000427978 DAZ1Q9NQZ3 744 aaKnown RBP10.1□□□□□ -0.79
TRPM4-202ENST00000427978 PSMB2P49721 201 aa10.09□□□□□ -0.79
TRPM4-202ENST00000427978 PLEKHB2Q96CS7 222 aa10.09□□□□□ -0.79
TRPM4-202ENST00000427978 ZMAT4Q9H898 229 aa10.09□□□□□ -0.79
TRPM4-202ENST00000427978 LINC01549A6NIU2 74 aa10.09□□□□□ -0.79
TRPM4-202ENST00000427978 SCGB1C2P0DMR2 95 aa10.09□□□□□ -0.79
TRPM4-202ENST00000427978 JMJD1CQ15652 2540 aa10.09□□□□□ -0.79
TRPM4-202ENST00000427978 G3V4G9 280 aa10.08□□□□□ -0.8
TRPM4-202ENST00000427978 HOXA3O43365 443 aaPredicted RBP10.08□□□□□ -0.8
TRPM4-202ENST00000427978 AZU1P20160 251 aa10.08□□□□□ -0.8
TRPM4-202ENST00000427978 EPG5Q9HCE0 2579 aa10.08□□□□□ -0.8
TRPM4-202ENST00000427978 MUC4Q99102 2169 aa10.08□□□□□ -0.8
TRPM4-202ENST00000427978 RNASE3P12724 160 aaKnown RBP10.08□□□□□ -0.8
TRPM4-202ENST00000427978 SYNJ2BPP57105 145 aa10.08□□□□□ -0.8
TRPM4-202ENST00000427978 U3KQE9 123 aa10.08□□□□□ -0.8
TRPM4-202ENST00000427978 ZNF462Q96JM2 2506 aa10.08□□□□□ -0.8
TRPM4-202ENST00000427978 SDHAF1A6NFY7 115 aa10.08□□□□□ -0.8
TRPM4-202ENST00000427978 IGHV4-59P01825 116 aa10.08□□□□□ -0.8
TRPM4-202ENST00000427978 ID1P41134 155 aa10.08□□□□□ -0.8
TRPM4-202ENST00000427978 MRPL53Q96EL3 112 aaKnown RBP10.08□□□□□ -0.8
TRPM4-202ENST00000427978 HIGD1BQ9P298 99 aa10.08□□□□□ -0.8
TRPM4-202ENST00000427978 TSSC4Q9Y5U2 329 aaPredicted RBP10.08□□□□□ -0.8
TRPM4-202ENST00000427978 DOPEY1Q5JWR5 2465 aa10.07□□□□□ -0.8
TRPM4-202ENST00000427978 MDFICQ9P1T7 246 aa10.07□□□□□ -0.8
TRPM4-202ENST00000427978 KNCNA6PVL3 124 aa10.07□□□□□ -0.8
TRPM4-202ENST00000427978 PRM2P04554 102 aa10.07□□□□□ -0.8
TRPM4-202ENST00000427978 GAGE13Q4V321 117 aa10.07□□□□□ -0.8
TRPM4-202ENST00000427978 C11orf86A6NJI1 115 aa10.07□□□□□ -0.8
TRPM4-202ENST00000427978 LGALS1P09382 135 aaKnown RBP10.07□□□□□ -0.8
TRPM4-202ENST00000427978 SUMO4Q6EEV6 95 aa10.07□□□□□ -0.8
TRPM4-202ENST00000427978 PSMG3-AS1Q96PY0 264 aa10.07□□□□□ -0.8
TRPM4-202ENST00000427978 AVPP01185 164 aa10.06□□□□□ -0.8
TRPM4-202ENST00000427978 RNASE13Q5GAN3 156 aaKnown RBP10.06□□□□□ -0.8
TRPM4-202ENST00000427978 TOMM6Q96B49 74 aa10.06□□□□□ -0.8
TRPM4-202ENST00000427978 HERVK_113P61574 105 aa10.05□□□□□ -0.8
TRPM4-202ENST00000427978 USMG5Q96IX5 58 aa10.05□□□□□ -0.8
TRPM4-202ENST00000427978 PRRC2AP48634 2157 aaKnown RBP10.05□□□□□ -0.8
TRPM4-202ENST00000427978 FOXI2Q6ZQN5 318 aa10.05□□□□□ -0.8
TRPM4-202ENST00000427978 NEXN-AS1Q8NBZ9 246 aa10.05□□□□□ -0.8
TRPM4-202ENST00000427978 TM2D2Q9BX73 214 aa10.05□□□□□ -0.8
TRPM4-202ENST00000427978 ADARB2-AS1A8MUL3 147 aa10.05□□□□□ -0.8
TRPM4-202ENST00000427978 MSMBP08118 114 aa10.05□□□□□ -0.8
TRPM4-202ENST00000427978 INSL3P51460 131 aa10.05□□□□□ -0.8
TRPM4-202ENST00000427978 SIGMAR1Q99720 223 aa10.05□□□□□ -0.8
TRPM4-202ENST00000427978 DUX3Q96PT4 197 aa10.04□□□□□ -0.8
TRPM4-202ENST00000427978 C20orf78Q9BR46 151 aa10.04□□□□□ -0.8
TRPM4-202ENST00000427978 BEX4Q9NWD9 120 aaPredicted RBP10.04□□□□□ -0.8
TRPM4-202ENST00000427978 MTORP42345 2549 aa10.04□□□□□ -0.8
TRPM4-202ENST00000427978 J3QR89 54 aa10.04□□□□□ -0.8
TRPM4-202ENST00000427978 IGHG2P01859 326 aa10.04□□□□□ -0.8
TRPM4-202ENST00000427978 Q1RN00 199 aa10.04□□□□□ -0.8
TRPM4-202ENST00000427978 RRN3P1Q2M238 152 aa10.04□□□□□ -0.8
TRPM4-202ENST00000427978 DEFB136Q30KP8 78 aa10.04□□□□□ -0.8
TRPM4-202ENST00000427978 ZFP2Q6ZN57 461 aa10.04□□□□□ -0.8
TRPM4-202ENST00000427978 RAX2Q96IS3 184 aa10.04□□□□□ -0.8
TRPM4-202ENST00000427978 ZNF876PQ49A33 203 aa10.03□□□□□ -0.8
TRPM4-202ENST00000427978 PTH2Q96A98 100 aa10.03□□□□□ -0.8
TRPM4-202ENST00000427978 SNRPD3P62318 126 aaKnown RBP10.03□□□□□ -0.8
TRPM4-202ENST00000427978 PHLDA1Q8WV24 401 aaPredicted RBP10.03□□□□□ -0.8
TRPM4-202ENST00000427978 LENEPQ9Y5L5 61 aa10.03□□□□□ -0.8
TRPM4-202ENST00000427978 E9PLD3 99 aa10.03□□□□□ -0.8
TRPM4-202ENST00000427978 LGALS3P17931 250 aaKnown RBP10.03□□□□□ -0.8
TRPM4-202ENST00000427978 NPC2P61916 151 aa10.03□□□□□ -0.8
TRPM4-202ENST00000427978 DEFB112Q30KQ8 113 aa10.03□□□□□ -0.8
TRPM4-202ENST00000427978 TRAV2A0A0B4J234 112 aa10.02□□□□□ -0.81
TRPM4-202ENST00000427978 PRSS2P07478 247 aa10.02□□□□□ -0.81
TRPM4-202ENST00000427978 Q8N1Y9 231 aa10.02□□□□□ -0.81
TRPM4-202ENST00000427978 IGHV4-4A0A075B6R2 117 aa10.02□□□□□ -0.81
TRPM4-202ENST00000427978 VCYO14598 125 aa10.02□□□□□ -0.81
TRPM4-202ENST00000427978 C10orf105Q8TEF2 133 aa10.02□□□□□ -0.81
TRPM4-202ENST00000427978 IGHV3OR16-12A0A075B7B8 117 aa10.01□□□□□ -0.81
TRPM4-202ENST00000427978 TRAV26-1A0A087WT03 109 aa10.01□□□□□ -0.81
TRPM4-202ENST00000427978 SOCS3O14543 225 aa10.01□□□□□ -0.81
TRPM4-202ENST00000427978 P0DMU3 169 aa10.01□□□□□ -0.81
TRPM4-202ENST00000427978 FAM231AP0DMU4 169 aa10.01□□□□□ -0.81
TRPM4-202ENST00000427978 FAM231CP0DMU5 169 aa10.01□□□□□ -0.81
TRPM4-202ENST00000427978 C11orf44Q8N8P7 122 aa10.01□□□□□ -0.81
TRPM4-202ENST00000427978 TRAV12-1A0A0B4J245 112 aa10.01□□□□□ -0.81
TRPM4-202ENST00000427978 A6NDX4 124 aa10.01□□□□□ -0.81
TRPM4-202ENST00000427978 CRYBA4P53673 196 aa10.01□□□□□ -0.81
TRPM4-202ENST00000427978 PMVKQ15126 192 aa10.01□□□□□ -0.81
TRPM4-202ENST00000427978 TRBV7-3A0A075B6L6 115 aa10□□□□□ -0.81
TRPM4-202ENST00000427978 LINC01546A6NGU7 62 aa10□□□□□ -0.81
TRPM4-202ENST00000427978 CEMP1Q6PRD7 247 aaPredicted RBP10□□□□□ -0.81
TRPM4-202ENST00000427978 ACANP16112 2415 aa10□□□□□ -0.81
TRPM4-202ENST00000427978 PPP1R17O96001 155 aa10□□□□□ -0.81
TRPM4-202ENST00000427978 SYT8Q8NBV8 401 aa10□□□□□ -0.81
TRPM4-202ENST00000427978 SPXQ9BT56 116 aa10□□□□□ -0.81
TRPM4-202ENST00000427978 IGSF10Q6WRI0 2623 aa9.99□□□□□ -0.81
TRPM4-202ENST00000427978 A0A1B0GV72 72 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms