RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 F5H697 171 aa10.89□□□□□ -0.67
GINS3-203ENST00000426538 NCR2O95944 276 aa10.89□□□□□ -0.67
GINS3-203ENST00000426538 IQCJQ1A5X6 159 aa10.89□□□□□ -0.67
GINS3-203ENST00000426538 Q6ZWC4 215 aa10.89□□□□□ -0.67
GINS3-203ENST00000426538 RASL10AQ92737 203 aa10.89□□□□□ -0.67
GINS3-203ENST00000426538 NDUFAF3Q9BU61 184 aa10.89□□□□□ -0.67
GINS3-203ENST00000426538 NOP10Q9NPE3 64 aaKnown RBP10.89□□□□□ -0.67
GINS3-203ENST00000426538 MRPL16Q9NX20 251 aaKnown RBP10.89□□□□□ -0.67
GINS3-203ENST00000426538 LAMTOR2Q9Y2Q5 125 aa10.89□□□□□ -0.67
GINS3-203ENST00000426538 KIF25-AS1Q9Y6Z4 181 aa10.89□□□□□ -0.67
GINS3-203ENST00000426538 DAZ2Q13117 558 aaKnown RBP10.89□□□□□ -0.67
GINS3-203ENST00000426538 LGALS9BQ3B8N2 356 aa10.89□□□□□ -0.67
GINS3-203ENST00000426538 TRAV26-2A0A0B4J265 109 aa10.88□□□□□ -0.67
GINS3-203ENST00000426538 CRYGDP07320 174 aa10.88□□□□□ -0.67
GINS3-203ENST00000426538 S100A2P29034 98 aa10.88□□□□□ -0.67
GINS3-203ENST00000426538 PDZD11Q5EBL8 140 aa10.88□□□□□ -0.67
GINS3-203ENST00000426538 IL17DQ8TAD2 202 aa10.88□□□□□ -0.67
GINS3-203ENST00000426538 SAMD10Q9BYL1 202 aa10.88□□□□□ -0.67
GINS3-203ENST00000426538 SERF1AO75920 110 aa10.87□□□□□ -0.67
GINS3-203ENST00000426538 TNFRSF6BO95407 300 aa10.87□□□□□ -0.67
GINS3-203ENST00000426538 LINC00315P59091 139 aa10.87□□□□□ -0.67
GINS3-203ENST00000426538 ZNF56Q15929 161 aa10.87□□□□□ -0.67
GINS3-203ENST00000426538 POM121L12Q8N7R1 296 aa10.87□□□□□ -0.67
GINS3-203ENST00000426538 OR11H2Q8NH07 326 aa10.87□□□□□ -0.67
GINS3-203ENST00000426538 X6R8D5 127 aa10.87□□□□□ -0.67
GINS3-203ENST00000426538 LOC389332A0A1B0GUA5 103 aa10.87□□□□□ -0.67
GINS3-203ENST00000426538 LOC105371267A0A1B0GV96 52 aa10.87□□□□□ -0.67
GINS3-203ENST00000426538 PPP1R17O96001 155 aa10.87□□□□□ -0.67
GINS3-203ENST00000426538 NPYP01303 97 aa10.87□□□□□ -0.67
GINS3-203ENST00000426538 EMP1P54849 157 aa10.87□□□□□ -0.67
GINS3-203ENST00000426538 NIT1Q86X76 327 aa10.87□□□□□ -0.67
GINS3-203ENST00000426538 PRSS3P2Q8NHM4 247 aa10.87□□□□□ -0.67
GINS3-203ENST00000426538 RNF183Q96D59 192 aa10.87□□□□□ -0.67
GINS3-203ENST00000426538 OVOL2Q9BRP0 275 aa10.87□□□□□ -0.67
GINS3-203ENST00000426538 PLAC8L1A1L4L8 177 aa10.86□□□□□ -0.67
GINS3-203ENST00000426538 GAS8-AS1O95177 125 aa10.86□□□□□ -0.67
GINS3-203ENST00000426538 GATA1P15976 413 aaPredicted RBP10.86□□□□□ -0.67
GINS3-203ENST00000426538 CFAP126Q5VTH2 177 aa10.86□□□□□ -0.67
GINS3-203ENST00000426538 HIST3H2BBQ8N257 126 aa10.86□□□□□ -0.67
GINS3-203ENST00000426538 MAP1LC3AQ9H492 121 aa10.86□□□□□ -0.67
GINS3-203ENST00000426538 LINC00614P0C842 121 aa10.85□□□□□ -0.67
GINS3-203ENST00000426538 RNASEKQ6P5S7 137 aaKnown RBP10.85□□□□□ -0.67
GINS3-203ENST00000426538 Q6ZTI0 123 aa10.85□□□□□ -0.67
GINS3-203ENST00000426538 IGHV3-73A0A0B4J1V6 119 aa10.84□□□□□ -0.67
GINS3-203ENST00000426538 RHODO00212 210 aa10.84□□□□□ -0.67
GINS3-203ENST00000426538 RS1O15537 224 aa10.84□□□□□ -0.67
GINS3-203ENST00000426538 NUPR1O60356 82 aa10.84□□□□□ -0.67
GINS3-203ENST00000426538 SUMO4Q6EEV6 95 aa10.84□□□□□ -0.67
GINS3-203ENST00000426538 OR4C5Q8NGB2 326 aa10.84□□□□□ -0.67
GINS3-203ENST00000426538 TRGV2A0A075B6R0 118 aa10.84□□□□□ -0.67
GINS3-203ENST00000426538 HSBP1O75506 76 aa10.84□□□□□ -0.67
GINS3-203ENST00000426538 ESDP10768 282 aa10.84□□□□□ -0.67
GINS3-203ENST00000426538 MIFP14174 115 aa10.84□□□□□ -0.67
GINS3-203ENST00000426538 FA2HQ7L5A8 372 aa10.84□□□□□ -0.67
GINS3-203ENST00000426538 NRACQ8N912 160 aa10.84□□□□□ -0.67
GINS3-203ENST00000426538 CHCHD1Q96BP2 118 aaKnown RBP10.84□□□□□ -0.67
GINS3-203ENST00000426538 GAGE12BA1L429 117 aa10.83□□□□□ -0.68
GINS3-203ENST00000426538 H7C1H1 209 aa10.83□□□□□ -0.68
GINS3-203ENST00000426538 GAGE7O76087 117 aa10.83□□□□□ -0.68
GINS3-203ENST00000426538 GAGE12FP0CL80 117 aa10.83□□□□□ -0.68
GINS3-203ENST00000426538 GAGE12GP0CL81 117 aa10.83□□□□□ -0.68
GINS3-203ENST00000426538 GAGE12IP0CL82 117 aa10.83□□□□□ -0.68
GINS3-203ENST00000426538 IFI27P40305 119 aaPredicted RBP10.83□□□□□ -0.68
GINS3-203ENST00000426538 LINC00310P59036 64 aa10.83□□□□□ -0.68
GINS3-203ENST00000426538 KPRPQ5T749 579 aaPredicted RBP10.83□□□□□ -0.68
GINS3-203ENST00000426538 ZFP2Q6ZN57 461 aa10.83□□□□□ -0.68
GINS3-203ENST00000426538 TMEM18Q96B42 140 aa10.83□□□□□ -0.68
GINS3-203ENST00000426538 PRB2P02812 416 aaPredicted RBP10.82□□□□□ -0.68
GINS3-203ENST00000426538 FABP4P15090 132 aa10.82□□□□□ -0.68
GINS3-203ENST00000426538 RPL39LQ96EH5 51 aaKnown RBP10.82□□□□□ -0.68
GINS3-203ENST00000426538 TP53TG1Q9Y2A0 90 aa10.82□□□□□ -0.68
GINS3-203ENST00000426538 TRAV4A0A0B4J268 109 aa10.81□□□□□ -0.68
GINS3-203ENST00000426538 DEFB121Q5J5C9 76 aa10.81□□□□□ -0.68
GINS3-203ENST00000426538 UFSP1Q6NVU6 142 aa10.81□□□□□ -0.68
GINS3-203ENST00000426538 C20orf78Q9BR46 151 aa10.81□□□□□ -0.68
GINS3-203ENST00000426538 NXT2Q9NPJ8 142 aaKnown RBP10.81□□□□□ -0.68
GINS3-203ENST00000426538 AP5S1Q9NUS5 200 aa10.81□□□□□ -0.68
GINS3-203ENST00000426538 NBEAL2Q6ZNJ1 2754 aa10.81□□□□□ -0.68
GINS3-203ENST00000426538 IGHV4-28A0A0C4DH34 117 aa10.81□□□□□ -0.68
GINS3-203ENST00000426538 PRSS47A8MTI9 375 aa10.81□□□□□ -0.68
GINS3-203ENST00000426538 M0QY20 66 aa10.81□□□□□ -0.68
GINS3-203ENST00000426538 PMCHP20382 165 aa10.81□□□□□ -0.68
GINS3-203ENST00000426538 AKR1D1P51857 326 aa10.81□□□□□ -0.68
GINS3-203ENST00000426538 SUMO2P61956 95 aaKnown RBP10.81□□□□□ -0.68
GINS3-203ENST00000426538 URB1-AS1Q96HZ7 61 aa10.81□□□□□ -0.68
GINS3-203ENST00000426538 HIST1H2BLQ99880 126 aa10.81□□□□□ -0.68
GINS3-203ENST00000426538 CIDEAO60543 219 aa10.8□□□□□ -0.68
GINS3-203ENST00000426538 AMTP48728 403 aa10.8□□□□□ -0.68
GINS3-203ENST00000426538 ZNF479Q96JC4 524 aa10.8□□□□□ -0.68
GINS3-203ENST00000426538 ST20Q9HBF5 79 aa10.8□□□□□ -0.68
GINS3-203ENST00000426538 NIT2Q9NQR4 276 aa10.8□□□□□ -0.68
GINS3-203ENST00000426538 IFITM10A6NMD0 228 aa10.79□□□□□ -0.68
GINS3-203ENST00000426538 LYRM9A8MSI8 78 aa10.79□□□□□ -0.68
GINS3-203ENST00000426538 IGHV3-53P01767 116 aa10.79□□□□□ -0.68
GINS3-203ENST00000426538 DEFB130BP0DP73 79 aa10.79□□□□□ -0.68
GINS3-203ENST00000426538 DEFB130AP0DP74 79 aa10.79□□□□□ -0.68
GINS3-203ENST00000426538 KRTAP21-3Q3LHN1 58 aa10.79□□□□□ -0.68
GINS3-203ENST00000426538 FAM19A2Q8N3H0 131 aa10.79□□□□□ -0.68
GINS3-203ENST00000426538 Q8N8P6 123 aa10.79□□□□□ -0.68
GINS3-203ENST00000426538 DNAH3Q8TD57 4116 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms