RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 CXCL1P09341 107 aa8.69□□□□□ -1.02
GPC1-204ENST00000426280 CFAP126Q5VTH2 177 aa8.69□□□□□ -1.02
GPC1-204ENST00000426280 OR10AG1Q8NH19 301 aa8.69□□□□□ -1.02
GPC1-204ENST00000426280 PTH2Q96A98 100 aa8.69□□□□□ -1.02
GPC1-204ENST00000426280 Q9UF83 564 aa8.69□□□□□ -1.02
GPC1-204ENST00000426280 PHLDA3Q9Y5J5 127 aa8.69□□□□□ -1.02
GPC1-204ENST00000426280 LY96Q9Y6Y9 160 aa8.69□□□□□ -1.02
GPC1-204ENST00000426280 PKHD1P08F94 4074 aa8.69□□□□□ -1.02
GPC1-204ENST00000426280 SNAI2O43623 268 aa8.68□□□□□ -1.02
GPC1-204ENST00000426280 GATCO43716 136 aaKnown RBP8.68□□□□□ -1.02
GPC1-204ENST00000426280 IGLC6P0CF74 106 aa8.68□□□□□ -1.02
GPC1-204ENST00000426280 MED14OSP0DP75 135 aa8.68□□□□□ -1.02
GPC1-204ENST00000426280 GATA1P15976 413 aaPredicted RBP8.68□□□□□ -1.02
GPC1-204ENST00000426280 RPS20P60866 119 aaKnown RBP8.68□□□□□ -1.02
GPC1-204ENST00000426280 RPL23P62829 140 aaKnown RBP8.68□□□□□ -1.02
GPC1-204ENST00000426280 MRPL23Q16540 153 aaKnown RBP8.68□□□□□ -1.02
GPC1-204ENST00000426280 TMEM241Q24JQ0 296 aa8.68□□□□□ -1.02
GPC1-204ENST00000426280 FAM74A3Q4VXF1 159 aa8.68□□□□□ -1.02
GPC1-204ENST00000426280 SOHLH1Q5JUK2 328 aa8.68□□□□□ -1.02
GPC1-204ENST00000426280 Q6ZRN7 208 aaPredicted RBP8.68□□□□□ -1.02
GPC1-204ENST00000426280 NEGR1Q7Z3B1 354 aa8.68□□□□□ -1.02
GPC1-204ENST00000426280 WFDC10BQ8IUB3 73 aa8.68□□□□□ -1.02
GPC1-204ENST00000426280 TPPP3Q9BW30 176 aa8.68□□□□□ -1.02
GPC1-204ENST00000426280 SSBP4Q9BWG4 385 aaPredicted RBP8.68□□□□□ -1.02
GPC1-204ENST00000426280 SAMD10Q9BYL1 202 aa8.68□□□□□ -1.02
GPC1-204ENST00000426280 RPP21Q9H633 154 aaKnown RBP8.68□□□□□ -1.02
GPC1-204ENST00000426280 SIVA1O15304 175 aa8.67□□□□□ -1.02
GPC1-204ENST00000426280 ERVFC1-1P60608 527 aa8.67□□□□□ -1.02
GPC1-204ENST00000426280 SLAQ13239 276 aa8.67□□□□□ -1.02
GPC1-204ENST00000426280 ADIRFQ15847 76 aa8.67□□□□□ -1.02
GPC1-204ENST00000426280 FAM231DQ6ZW35 169 aa8.67□□□□□ -1.02
GPC1-204ENST00000426280 SLC25A29Q8N8R3 303 aa8.67□□□□□ -1.02
GPC1-204ENST00000426280 FER1L6-AS1Q8NA97 138 aa8.67□□□□□ -1.02
GPC1-204ENST00000426280 SYT8Q8NBV8 401 aa8.67□□□□□ -1.02
GPC1-204ENST00000426280 NAT8Q9UHE5 227 aa8.67□□□□□ -1.02
GPC1-204ENST00000426280 OR5AL1P0C617 328 aa8.66□□□□□ -1.02
GPC1-204ENST00000426280 FUSP35637 526 aaKnown RBP eCLIP8.66□□□□□ -1.02
GPC1-204ENST00000426280 LINC00315P59091 139 aa8.66□□□□□ -1.02
GPC1-204ENST00000426280 ZFP82Q8N141 532 aa8.66□□□□□ -1.02
GPC1-204ENST00000426280 ISOC2Q96AB3 205 aa8.66□□□□□ -1.02
GPC1-204ENST00000426280 A0A087WWL8 130 aa8.65□□□□□ -1.02
GPC1-204ENST00000426280 A8MWV9 139 aa8.65□□□□□ -1.02
GPC1-204ENST00000426280 SRIP30626 198 aa8.65□□□□□ -1.02
GPC1-204ENST00000426280 KRTAP10-2P60368 255 aa8.65□□□□□ -1.02
GPC1-204ENST00000426280 FAM74A4Q5TZK3 123 aa8.65□□□□□ -1.02
GPC1-204ENST00000426280 SPANXN1Q5VSR9 72 aa8.65□□□□□ -1.02
GPC1-204ENST00000426280 LYZL1Q6UWQ5 148 aa8.65□□□□□ -1.02
GPC1-204ENST00000426280 COMMD7Q86VX2 200 aa8.65□□□□□ -1.02
GPC1-204ENST00000426280 GTSF1Q8WW33 167 aa8.65□□□□□ -1.02
GPC1-204ENST00000426280 SFRP2Q96HF1 295 aa8.65□□□□□ -1.02
GPC1-204ENST00000426280 OSTCQ9NRP0 149 aa8.65□□□□□ -1.02
GPC1-204ENST00000426280 MSRB1Q9NZV6 116 aa8.65□□□□□ -1.02
GPC1-204ENST00000426280 A0A1W2PPQ1 181 aa8.64□□□□□ -1.03
GPC1-204ENST00000426280 XKRY2A2RUG3 117 aa8.64□□□□□ -1.03
GPC1-204ENST00000426280 CRYGDP07320 174 aa8.64□□□□□ -1.03
GPC1-204ENST00000426280 PIK3CD-AS1Q5SR53 167 aa8.64□□□□□ -1.03
GPC1-204ENST00000426280 UFSP1Q6NVU6 142 aa8.64□□□□□ -1.03
GPC1-204ENST00000426280 LINC00862A6NCI5 91 aa8.63□□□□□ -1.03
GPC1-204ENST00000426280 TTC32Q5I0X7 151 aa8.63□□□□□ -1.03
GPC1-204ENST00000426280 OR10G8Q8NGN5 311 aa8.63□□□□□ -1.03
GPC1-204ENST00000426280 KRTAP4-5Q9BYR2 181 aa8.63□□□□□ -1.03
GPC1-204ENST00000426280 V9GYV3 84 aa8.63□□□□□ -1.03
GPC1-204ENST00000426280 RYR1P21817 5038 aa8.62□□□□□ -1.03
GPC1-204ENST00000426280 A8MWL6 223 aa8.62□□□□□ -1.03
GPC1-204ENST00000426280 ADCYAP1P18509 176 aa8.62□□□□□ -1.03
GPC1-204ENST00000426280 CTRLP40313 264 aa8.62□□□□□ -1.03
GPC1-204ENST00000426280 SPATA12Q7Z6I5 190 aa8.62□□□□□ -1.03
GPC1-204ENST00000426280 Q8N3U1 123 aa8.62□□□□□ -1.03
GPC1-204ENST00000426280 C14orf178Q8N769 122 aaPredicted RBP8.62□□□□□ -1.03
GPC1-204ENST00000426280 C15orf54Q8N8G6 183 aa8.62□□□□□ -1.03
GPC1-204ENST00000426280 PGLYRP4Q96LB8 373 aa8.62□□□□□ -1.03
GPC1-204ENST00000426280 TRBV6-4A0A1B0GX49 114 aa8.61□□□□□ -1.03
GPC1-204ENST00000426280 F2Z2F3 143 aa8.61□□□□□ -1.03
GPC1-204ENST00000426280 CIDEAO60543 219 aa8.61□□□□□ -1.03
GPC1-204ENST00000426280 NTF3P20783 257 aa8.61□□□□□ -1.03
GPC1-204ENST00000426280 CACNG7P62955 275 aa8.61□□□□□ -1.03
GPC1-204ENST00000426280 CT83Q5H943 113 aa8.61□□□□□ -1.03
GPC1-204ENST00000426280 UQCC3Q6UW78 93 aa8.61□□□□□ -1.03
GPC1-204ENST00000426280 ZFP2Q6ZN57 461 aa8.61□□□□□ -1.03
GPC1-204ENST00000426280 TMEM218A2RU14 115 aa8.6□□□□□ -1.03
GPC1-204ENST00000426280 DNAH10OSP0CZ25 163 aa8.6□□□□□ -1.03
GPC1-204ENST00000426280 TSKUQ8WUA8 353 aa8.6□□□□□ -1.03
GPC1-204ENST00000426280 KIF25-AS1Q9Y6Z4 181 aa8.6□□□□□ -1.03
GPC1-204ENST00000426280 LRP1BQ9NZR2 4599 aa8.59□□□□□ -1.03
GPC1-204ENST00000426280 GAGE12JA6NER3 117 aa8.59□□□□□ -1.03
GPC1-204ENST00000426280 HIGD1CA8MV81 97 aa8.59□□□□□ -1.03
GPC1-204ENST00000426280 C16orf90A8MZG2 172 aa8.59□□□□□ -1.03
GPC1-204ENST00000426280 F8W036 122 aa8.59□□□□□ -1.03
GPC1-204ENST00000426280 RHODO00212 210 aa8.59□□□□□ -1.03
GPC1-204ENST00000426280 LINC00694P0DN24 101 aa8.59□□□□□ -1.03
GPC1-204ENST00000426280 EVI2AP22794 236 aa8.59□□□□□ -1.03
GPC1-204ENST00000426280 GAGE1Q13065 139 aa8.59□□□□□ -1.03
GPC1-204ENST00000426280 GAGE4Q13068 117 aa8.59□□□□□ -1.03
GPC1-204ENST00000426280 GAGE5Q13069 117 aa8.59□□□□□ -1.03
GPC1-204ENST00000426280 RHOHQ15669 191 aa8.59□□□□□ -1.03
GPC1-204ENST00000426280 TWIST1Q15672 202 aa8.59□□□□□ -1.03
GPC1-204ENST00000426280 GAGE13Q4V321 117 aa8.59□□□□□ -1.03
GPC1-204ENST00000426280 AP1S3Q96PC3 154 aa8.59□□□□□ -1.03
GPC1-204ENST00000426280 CNFNQ9BYD5 112 aa8.59□□□□□ -1.03
GPC1-204ENST00000426280 MGPP08493 103 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms