RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 PRNTQ86SH4 94 aa4.24□□□□□ -1.73
NIF3L1-207ENST00000426253 C5orf17Q8NAS9 161 aa4.24□□□□□ -1.73
NIF3L1-207ENST00000426253 RASL10AQ92737 203 aa4.24□□□□□ -1.73
NIF3L1-207ENST00000426253 KCNS1Q96KK3 526 aa4.24□□□□□ -1.73
NIF3L1-207ENST00000426253 NDFIP1Q9BT67 221 aa4.24□□□□□ -1.73
NIF3L1-207ENST00000426253 CYTL1Q9NRR1 136 aa4.24□□□□□ -1.73
NIF3L1-207ENST00000426253 PRO0255Q9UI72 69 aa4.24□□□□□ -1.73
NIF3L1-207ENST00000426253 NAGKQ9UJ70 344 aa4.24□□□□□ -1.73
NIF3L1-207ENST00000426253 PSG8Q9UQ74 426 aa4.24□□□□□ -1.73
NIF3L1-207ENST00000426253 A0A096LPF7 62 aa4.23□□□□□ -1.73
NIF3L1-207ENST00000426253 TRGV4A0A0C4DH28 118 aa4.23□□□□□ -1.73
NIF3L1-207ENST00000426253 CTXND1A0A1B0GTU2 59 aa4.23□□□□□ -1.73
NIF3L1-207ENST00000426253 F6UZH7 168 aa4.23□□□□□ -1.73
NIF3L1-207ENST00000426253 G3V3Q6 166 aa4.23□□□□□ -1.73
NIF3L1-207ENST00000426253 SMLR1H3BR10 107 aa4.23□□□□□ -1.73
NIF3L1-207ENST00000426253 GCGP01275 180 aa4.23□□□□□ -1.73
NIF3L1-207ENST00000426253 IFNA7P01567 189 aa4.23□□□□□ -1.73
NIF3L1-207ENST00000426253 ZNF80P51504 273 aaPredicted RBP4.23□□□□□ -1.73
NIF3L1-207ENST00000426253 CRYBA4P53673 196 aa4.23□□□□□ -1.73
NIF3L1-207ENST00000426253 RPL36AP83881 106 aaKnown RBP4.23□□□□□ -1.73
NIF3L1-207ENST00000426253 FLI1Q01543 452 aaPredicted RBP4.23□□□□□ -1.73
NIF3L1-207ENST00000426253 ZNF726P1Q15940 193 aa4.23□□□□□ -1.73
NIF3L1-207ENST00000426253 SAPCD1Q5SSQ6 148 aa4.23□□□□□ -1.73
NIF3L1-207ENST00000426253 AKR1C8PQ5T2L2 129 aa4.23□□□□□ -1.73
NIF3L1-207ENST00000426253 SPATA12Q7Z6I5 190 aa4.23□□□□□ -1.73
NIF3L1-207ENST00000426253 SMIM29Q86T20 159 aa4.23□□□□□ -1.73
NIF3L1-207ENST00000426253 LINC00479Q96M42 142 aa4.23□□□□□ -1.73
NIF3L1-207ENST00000426253 SDF2L1Q9HCN8 221 aa4.23□□□□□ -1.73
NIF3L1-207ENST00000426253 IGHV3-16A0A0C4DH30 117 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 FBLL1A6NHQ2 334 aaKnown RBP4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 HMSDA8MTL9 139 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 KRTAP29-1A8MX34 341 aaPredicted RBP4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 GGTLC3B5MD39 225 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 C9JCJ5 164 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 M0R2P5 195 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 IGLV2-11P01706 119 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 TYMSP04818 313 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 SFTA3P0C7M3 94 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 FGF8P55075 233 aaPredicted RBP4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 UBE2G2P60604 165 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 MRPL23Q16540 153 aaKnown RBP4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 ZFP69Q49AA0 526 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 SMUG1Q53HV7 270 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 LYPD5Q6UWN5 251 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 C6orf223Q8N319 242 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 KCNRGQ8N5I3 272 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 STPG4Q8N801 248 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 CYB561D1Q8N8Q1 229 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 TMEM75Q8N9X5 138 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 OR4C5Q8NGB2 326 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 STOML3Q8TAV4 291 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 UPK3BQ9BT76 320 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 NKX6-2Q9C056 277 aaPredicted RBP4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 ICOSQ9Y6W8 199 aa4.22□□□□□ -1.73
NIF3L1-207ENST00000426253 TRAV4A0A0B4J268 109 aa4.21□□□□□ -1.74
NIF3L1-207ENST00000426253 A0A0D9SG52 128 aa4.21□□□□□ -1.74
NIF3L1-207ENST00000426253 FAM74A7A6NL05 159 aa4.21□□□□□ -1.74
NIF3L1-207ENST00000426253 FABP5P3A8MUU1 101 aa4.21□□□□□ -1.74
NIF3L1-207ENST00000426253 SMIM1B2RUZ4 78 aa4.21□□□□□ -1.74
NIF3L1-207ENST00000426253 SIVA1O15304 175 aa4.21□□□□□ -1.74
NIF3L1-207ENST00000426253 PRSS1P07477 247 aa4.21□□□□□ -1.74
NIF3L1-207ENST00000426253 PFN1P07737 140 aaKnown RBP4.21□□□□□ -1.74
NIF3L1-207ENST00000426253 SEC11BP0C7V7 166 aa4.21□□□□□ -1.74
NIF3L1-207ENST00000426253 PPT1P50897 306 aa4.21□□□□□ -1.74
NIF3L1-207ENST00000426253 KIAA1644Q3SXP7 199 aa4.21□□□□□ -1.74
NIF3L1-207ENST00000426253 ZNF876PQ49A33 203 aa4.21□□□□□ -1.74
NIF3L1-207ENST00000426253 NEGR1Q7Z3B1 354 aa4.21□□□□□ -1.74
NIF3L1-207ENST00000426253 HIST1H2BAQ96A08 127 aa4.21□□□□□ -1.74
NIF3L1-207ENST00000426253 MRPS16Q9Y3D3 137 aaKnown RBP4.21□□□□□ -1.74
NIF3L1-207ENST00000426253 FAT1Q14517 4588 aa4.2□□□□□ -1.74
NIF3L1-207ENST00000426253 KANTRA0A1W2PQU2 76 aa4.2□□□□□ -1.74
NIF3L1-207ENST00000426253 MAP1LC3B2A6NCE7 125 aa4.2□□□□□ -1.74
NIF3L1-207ENST00000426253 K7EQD1 137 aa4.2□□□□□ -1.74
NIF3L1-207ENST00000426253 CIDEAO60543 219 aa4.2□□□□□ -1.74
NIF3L1-207ENST00000426253 NXPH4O95158 308 aa4.2□□□□□ -1.74
NIF3L1-207ENST00000426253 ORM1P02763 201 aa4.2□□□□□ -1.74
NIF3L1-207ENST00000426253 SMR3BP02814 79 aaPredicted RBP4.2□□□□□ -1.74
NIF3L1-207ENST00000426253 SRIP30626 198 aa4.2□□□□□ -1.74
NIF3L1-207ENST00000426253 ASIPP42127 132 aa4.2□□□□□ -1.74
NIF3L1-207ENST00000426253 FHITP49789 147 aa4.2□□□□□ -1.74
NIF3L1-207ENST00000426253 EIF5AP63241 154 aaKnown RBP4.2□□□□□ -1.74
NIF3L1-207ENST00000426253 ZNF345Q14585 488 aa4.2□□□□□ -1.74
NIF3L1-207ENST00000426253 TTC32Q5I0X7 151 aa4.2□□□□□ -1.74
NIF3L1-207ENST00000426253 SFT2D1Q8WV19 159 aa4.2□□□□□ -1.74
NIF3L1-207ENST00000426253 PCNPQ8WW12 178 aaKnown RBP4.2□□□□□ -1.74
NIF3L1-207ENST00000426253 MBD3L1Q8WWY6 194 aa4.2□□□□□ -1.74
NIF3L1-207ENST00000426253 ZNF471Q9BX82 626 aaPredicted RBP4.2□□□□□ -1.74
NIF3L1-207ENST00000426253 MAP1LC3BQ9GZQ8 125 aa4.2□□□□□ -1.74
NIF3L1-207ENST00000426253 ARL2-SNX15V9GYD0 113 aa4.2□□□□□ -1.74
NIF3L1-207ENST00000426253 NACAE9PAV3 2078 aa4.19□□□□□ -1.74
NIF3L1-207ENST00000426253 TRAV9-2A0A087WT02 112 aa4.19□□□□□ -1.74
NIF3L1-207ENST00000426253 IGHV3-73A0A0B4J1V6 119 aa4.19□□□□□ -1.74
NIF3L1-207ENST00000426253 IGKV3D-20A0A0C4DH25 116 aa4.19□□□□□ -1.74
NIF3L1-207ENST00000426253 UMAD1C9J7I0 102 aa4.19□□□□□ -1.74
NIF3L1-207ENST00000426253 PEX7O00628 323 aa4.19□□□□□ -1.74
NIF3L1-207ENST00000426253 RS1O15537 224 aa4.19□□□□□ -1.74
NIF3L1-207ENST00000426253 BCL2L11O43521 198 aa4.19□□□□□ -1.74
NIF3L1-207ENST00000426253 PFDN1O60925 122 aa4.19□□□□□ -1.74
NIF3L1-207ENST00000426253 RNASE3P12724 160 aaKnown RBP4.19□□□□□ -1.74
NIF3L1-207ENST00000426253 S100A4P26447 101 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms