RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 STHQ8IWL8 128 aa11.41□□□□□ -0.58
SHOX2-202ENST00000425436 B9D2Q9BPU9 175 aa11.41□□□□□ -0.58
SHOX2-202ENST00000425436 DNAH9Q9NYC9 4486 aa11.41□□□□□ -0.58
SHOX2-202ENST00000425436 PRSS47A8MTI9 375 aa11.4□□□□□ -0.58
SHOX2-202ENST00000425436 GNRH2O43555 120 aa11.4□□□□□ -0.58
SHOX2-202ENST00000425436 NXPH4O95158 308 aa11.4□□□□□ -0.58
SHOX2-202ENST00000425436 IGKV3-20P01619 116 aa11.4□□□□□ -0.58
SHOX2-202ENST00000425436 RNASE3P12724 160 aaKnown RBP11.4□□□□□ -0.58
SHOX2-202ENST00000425436 AMTNQ6UX39 209 aa11.4□□□□□ -0.58
SHOX2-202ENST00000425436 TEX43Q6ZNM6 134 aa11.4□□□□□ -0.58
SHOX2-202ENST00000425436 DPH3P1Q9H4G8 78 aa11.4□□□□□ -0.58
SHOX2-202ENST00000425436 TGP01266 2768 aa11.4□□□□□ -0.58
SHOX2-202ENST00000425436 IGHV1OR15-1A0A075B7D0 117 aa11.4□□□□□ -0.59
SHOX2-202ENST00000425436 IFI27P40305 119 aaPredicted RBP11.4□□□□□ -0.59
SHOX2-202ENST00000425436 KIR3DS1Q14943 382 aa11.4□□□□□ -0.59
SHOX2-202ENST00000425436 AP1S3Q96PC3 154 aa11.4□□□□□ -0.59
SHOX2-202ENST00000425436 TMEM70Q9BUB7 260 aa11.4□□□□□ -0.59
SHOX2-202ENST00000425436 TIMM8BQ9Y5J9 83 aaPredicted RBP11.4□□□□□ -0.59
SHOX2-202ENST00000425436 TRGV11A0A075B6L2 103 aa11.39□□□□□ -0.59
SHOX2-202ENST00000425436 C20orf202A1L168 122 aa11.39□□□□□ -0.59
SHOX2-202ENST00000425436 LINC01546A6NGU7 62 aa11.39□□□□□ -0.59
SHOX2-202ENST00000425436 M0R381 172 aa11.39□□□□□ -0.59
SHOX2-202ENST00000425436 CRXO43186 299 aaPredicted RBP11.39□□□□□ -0.59
SHOX2-202ENST00000425436 TNFRSF6BO95407 300 aa11.39□□□□□ -0.59
SHOX2-202ENST00000425436 NPYP01303 97 aa11.39□□□□□ -0.59
SHOX2-202ENST00000425436 SPINK13Q1W4C9 94 aa11.39□□□□□ -0.59
SHOX2-202ENST00000425436 TRPT1Q86TN4 253 aaKnown RBP11.39□□□□□ -0.59
SHOX2-202ENST00000425436 ZNF664Q8N3J9 261 aa11.39□□□□□ -0.59
SHOX2-202ENST00000425436 SYT8Q8NBV8 401 aa11.39□□□□□ -0.59
SHOX2-202ENST00000425436 C20orf144Q9BQM9 153 aa11.39□□□□□ -0.59
SHOX2-202ENST00000425436 MAP1LC3CQ9BXW4 147 aa11.39□□□□□ -0.59
SHOX2-202ENST00000425436 LOC389332A0A1B0GUA5 103 aa11.38□□□□□ -0.59
SHOX2-202ENST00000425436 SMIM17P0DL12 118 aa11.38□□□□□ -0.59
SHOX2-202ENST00000425436 VAMP8Q9BV40 100 aa11.37□□□□□ -0.59
SHOX2-202ENST00000425436 CSTL1Q9H114 145 aa11.37□□□□□ -0.59
SHOX2-202ENST00000425436 IGHV3-16A0A0C4DH30 117 aa11.36□□□□□ -0.59
SHOX2-202ENST00000425436 SMKR1H3BMG3 65 aa11.36□□□□□ -0.59
SHOX2-202ENST00000425436 APOC4P55056 127 aa11.36□□□□□ -0.59
SHOX2-202ENST00000425436 PET117Q6UWS5 81 aa11.36□□□□□ -0.59
SHOX2-202ENST00000425436 POM121L12Q8N7R1 296 aa11.36□□□□□ -0.59
SHOX2-202ENST00000425436 C9orf85Q96MD7 179 aa11.36□□□□□ -0.59
SHOX2-202ENST00000425436 TRAV12-2A0A075B6T6 113 aa11.35□□□□□ -0.59
SHOX2-202ENST00000425436 NCR2O95944 276 aa11.35□□□□□ -0.59
SHOX2-202ENST00000425436 FXYD7P58549 80 aa11.35□□□□□ -0.59
SHOX2-202ENST00000425436 Q8N8P6 123 aa11.35□□□□□ -0.59
SHOX2-202ENST00000425436 Q8N976 141 aa11.35□□□□□ -0.59
SHOX2-202ENST00000425436 C20orf78Q9BR46 151 aa11.35□□□□□ -0.59
SHOX2-202ENST00000425436 LINC00467Q9BRT7 94 aa11.35□□□□□ -0.59
SHOX2-202ENST00000425436 RETNQ9HD89 108 aa11.35□□□□□ -0.59
SHOX2-202ENST00000425436 SYS1-DBNDD2H3BUS1 97 aa11.35□□□□□ -0.59
SHOX2-202ENST00000425436 K7EMI3 77 aa11.35□□□□□ -0.59
SHOX2-202ENST00000425436 HBDP02042 147 aa11.35□□□□□ -0.59
SHOX2-202ENST00000425436 SPATA12Q7Z6I5 190 aa11.35□□□□□ -0.59
SHOX2-202ENST00000425436 HUWE1Q7Z6Z7 4374 aaKnown RBP11.34□□□□□ -0.59
SHOX2-202ENST00000425436 KIR2DL5BA0A0G2JN68 375 aa11.34□□□□□ -0.59
SHOX2-202ENST00000425436 KIR2DL5BA0A0G2JPC4 375 aa11.34□□□□□ -0.59
SHOX2-202ENST00000425436 GIG44P09565 113 aaPredicted RBP11.34□□□□□ -0.59
SHOX2-202ENST00000425436 DDTP30046 118 aa11.34□□□□□ -0.59
SHOX2-202ENST00000425436 KIR2DL5AQ8N109 375 aa11.34□□□□□ -0.59
SHOX2-202ENST00000425436 C14orf178Q8N769 122 aaPredicted RBP11.34□□□□□ -0.59
SHOX2-202ENST00000425436 NRACQ8N912 160 aa11.34□□□□□ -0.59
SHOX2-202ENST00000425436 KIR2DL5BQ8NHK3 375 aa11.34□□□□□ -0.59
SHOX2-202ENST00000425436 NUTF2P61970 127 aaKnown RBP11.33□□□□□ -0.6
SHOX2-202ENST00000425436 DEFB135Q30KP9 77 aa11.33□□□□□ -0.6
SHOX2-202ENST00000425436 PIK3CD-AS1Q5SR53 167 aa11.33□□□□□ -0.6
SHOX2-202ENST00000425436 TM2D3Q9BRN9 247 aa11.33□□□□□ -0.6
SHOX2-202ENST00000425436 PRO1933Q9H354 126 aa11.33□□□□□ -0.6
SHOX2-202ENST00000425436 TENM3Q9P273 2699 aa11.32□□□□□ -0.6
SHOX2-202ENST00000425436 CBY3A6NI87 242 aa11.32□□□□□ -0.6
SHOX2-202ENST00000425436 LINC00587B1AMM8 73 aa11.32□□□□□ -0.6
SHOX2-202ENST00000425436 NHLRC4P0CG21 123 aaPredicted RBP11.32□□□□□ -0.6
SHOX2-202ENST00000425436 FCER1GP30273 86 aa11.32□□□□□ -0.6
SHOX2-202ENST00000425436 PTH2Q96A98 100 aa11.32□□□□□ -0.6
SHOX2-202ENST00000425436 ZMAT4Q9H898 229 aa11.32□□□□□ -0.6
SHOX2-202ENST00000425436 XCL2Q9UBD3 114 aa11.32□□□□□ -0.6
SHOX2-202ENST00000425436 INSP01308 110 aa11.31□□□□□ -0.6
SHOX2-202ENST00000425436 MORN3Q6PF18 240 aaPredicted RBP11.31□□□□□ -0.6
SHOX2-202ENST00000425436 G0S2P27469 103 aa11.3□□□□□ -0.6
SHOX2-202ENST00000425436 RPL32P62910 135 aaKnown RBP11.3□□□□□ -0.6
SHOX2-202ENST00000425436 SPATA25Q9BR10 227 aa11.3□□□□□ -0.6
SHOX2-202ENST00000425436 MDFICQ9P1T7 246 aa11.3□□□□□ -0.6
SHOX2-202ENST00000425436 KIF25-AS1Q9Y6Z4 181 aa11.3□□□□□ -0.6
SHOX2-202ENST00000425436 IGLV2-18A0A075B6J9 118 aa11.3□□□□□ -0.6
SHOX2-202ENST00000425436 TRAV9-2A0A087WT02 112 aa11.3□□□□□ -0.6
SHOX2-202ENST00000425436 MGPP08493 103 aa11.3□□□□□ -0.6
SHOX2-202ENST00000425436 SUMO2P61956 95 aaKnown RBP11.3□□□□□ -0.6
SHOX2-202ENST00000425436 LAGE3Q14657 143 aa11.3□□□□□ -0.6
SHOX2-202ENST00000425436 OVOL2Q9BRP0 275 aa11.3□□□□□ -0.6
SHOX2-202ENST00000425436 LINC01549A6NIU2 74 aa11.29□□□□□ -0.6
SHOX2-202ENST00000425436 SPRY2O43597 315 aa11.29□□□□□ -0.6
SHOX2-202ENST00000425436 GATA1P15976 413 aaPredicted RBP11.29□□□□□ -0.6
SHOX2-202ENST00000425436 ORMDL2Q53FV1 153 aa11.29□□□□□ -0.6
SHOX2-202ENST00000425436 RNF183Q96D59 192 aa11.29□□□□□ -0.6
SHOX2-202ENST00000425436 NDUFAF3Q9BU61 184 aa11.29□□□□□ -0.6
SHOX2-202ENST00000425436 SMIM2Q9BVW6 85 aa11.29□□□□□ -0.6
SHOX2-202ENST00000425436 PAM16Q9Y3D7 125 aa11.29□□□□□ -0.6
SHOX2-202ENST00000425436 A0A096LNJ9 63 aa11.28□□□□□ -0.6
SHOX2-202ENST00000425436 TRAV26-2A0A0B4J265 109 aa11.28□□□□□ -0.6
SHOX2-202ENST00000425436 GAS8-AS1O95177 125 aa11.28□□□□□ -0.6
SHOX2-202ENST00000425436 LINC00315P59091 139 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms