RNA–Protein interactions for RNA: ENST00000425167.6

TRPV1-204, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPV1, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-204ENST00000425167 CSPG4Q6UVK1 2322 aa9.51□□□□□ -0.89
TRPV1-204ENST00000425167 IGLV4-69A0A075B6H9 119 aa9.51□□□□□ -0.89
TRPV1-204ENST00000425167 AVPP01185 164 aa9.51□□□□□ -0.89
TRPV1-204ENST00000425167 IGKV3-20P01619 116 aa9.51□□□□□ -0.89
TRPV1-204ENST00000425167 RPL32P62910 135 aaKnown RBP9.51□□□□□ -0.89
TRPV1-204ENST00000425167 MTURNQ8N3F0 131 aa9.51□□□□□ -0.89
TRPV1-204ENST00000425167 KLHL30-AS1Q8NEE0 82 aa9.51□□□□□ -0.89
TRPV1-204ENST00000425167 SDHAF1A6NFY7 115 aa9.5□□□□□ -0.89
TRPV1-204ENST00000425167 IGIPA6NJ69 53 aa9.5□□□□□ -0.89
TRPV1-204ENST00000425167 HOXA3O43365 443 aaPredicted RBP9.5□□□□□ -0.89
TRPV1-204ENST00000425167 COX6B1P14854 86 aa9.5□□□□□ -0.89
TRPV1-204ENST00000425167 SRSF9Q13242 221 aaKnown RBP eCLIP9.5□□□□□ -0.89
TRPV1-204ENST00000425167 TRAV12-2A0A075B6T6 113 aa9.5□□□□□ -0.89
TRPV1-204ENST00000425167 VCYO14598 125 aa9.5□□□□□ -0.89
TRPV1-204ENST00000425167 HERVK_113P61574 105 aa9.5□□□□□ -0.89
TRPV1-204ENST00000425167 PMVKQ15126 192 aa9.5□□□□□ -0.89
TRPV1-204ENST00000425167 SAMD13Q5VXD3 122 aa9.5□□□□□ -0.89
TRPV1-204ENST00000425167 PGPEP1Q9NXJ5 209 aa9.5□□□□□ -0.89
TRPV1-204ENST00000425167 TMEM238LA0A1B0GVL6 79 aa9.49□□□□□ -0.89
TRPV1-204ENST00000425167 A6NJY4 79 aa9.49□□□□□ -0.89
TRPV1-204ENST00000425167 MORN3Q6PF18 240 aaPredicted RBP9.49□□□□□ -0.89
TRPV1-204ENST00000425167 LINC01549A6NIU2 74 aa9.49□□□□□ -0.89
TRPV1-204ENST00000425167 PSMB8P28062 276 aa9.49□□□□□ -0.89
TRPV1-204ENST00000425167 PAPPA-AS1Q5QFB9 102 aa9.49□□□□□ -0.89
TRPV1-204ENST00000425167 C10orf99Q6UWK7 81 aa9.49□□□□□ -0.89
TRPV1-204ENST00000425167 SPANXB1Q9NS25 103 aaPredicted RBP9.49□□□□□ -0.89
TRPV1-204ENST00000425167 MRPL16Q9NX20 251 aaKnown RBP9.49□□□□□ -0.89
TRPV1-204ENST00000425167 ZNF56Q15929 161 aa9.48□□□□□ -0.89
TRPV1-204ENST00000425167 ETDBQ3ZM63 59 aa9.48□□□□□ -0.89
TRPV1-204ENST00000425167 GAGE13Q4V321 117 aa9.48□□□□□ -0.89
TRPV1-204ENST00000425167 SH2D6Q7Z4S9 175 aa9.48□□□□□ -0.89
TRPV1-204ENST00000425167 ZNF256Q9Y2P7 627 aaPredicted RBP9.48□□□□□ -0.89
TRPV1-204ENST00000425167 LGALS9O00182 355 aa9.48□□□□□ -0.89
TRPV1-204ENST00000425167 TMEM141Q96I45 108 aa9.48□□□□□ -0.89
TRPV1-204ENST00000425167 TIMM17AQ99595 171 aa9.48□□□□□ -0.89
TRPV1-204ENST00000425167 MDFICQ9P1T7 246 aa9.48□□□□□ -0.89
TRPV1-204ENST00000425167 IGHV3-16A0A0C4DH30 117 aa9.47□□□□□ -0.89
TRPV1-204ENST00000425167 B4DSR2 109 aa9.47□□□□□ -0.89
TRPV1-204ENST00000425167 IGHV4-59P01825 116 aa9.47□□□□□ -0.89
TRPV1-204ENST00000425167 SNRPD3P62318 126 aaKnown RBP9.47□□□□□ -0.89
TRPV1-204ENST00000425167 TMEM170BQ5T4T1 132 aa9.47□□□□□ -0.89
TRPV1-204ENST00000425167 CSMD2Q7Z408 3487 aa9.47□□□□□ -0.89
TRPV1-204ENST00000425167 TRBV27A0A0K0K1C4 114 aa9.47□□□□□ -0.89
TRPV1-204ENST00000425167 C9orf85Q96MD7 179 aa9.47□□□□□ -0.89
TRPV1-204ENST00000425167 A0A0J9YX75 114 aa9.46□□□□□ -0.89
TRPV1-204ENST00000425167 Q8N1Y9 231 aa9.46□□□□□ -0.89
TRPV1-204ENST00000425167 SYT8Q8NBV8 401 aa9.46□□□□□ -0.89
TRPV1-204ENST00000425167 J3QR89 54 aa9.46□□□□□ -0.9
TRPV1-204ENST00000425167 SPINK13Q1W4C9 94 aa9.46□□□□□ -0.9
TRPV1-204ENST00000425167 IGSF10Q6WRI0 2623 aa9.46□□□□□ -0.9
TRPV1-204ENST00000425167 TRBV6-5A0A0K0K1A5 114 aa9.45□□□□□ -0.9
TRPV1-204ENST00000425167 APOMO95445 188 aa9.45□□□□□ -0.9
TRPV1-204ENST00000425167 UBE2D1P51668 147 aa9.45□□□□□ -0.9
TRPV1-204ENST00000425167 TSPEAR-AS2P59090 65 aa9.45□□□□□ -0.9
TRPV1-204ENST00000425167 DEFB112Q30KQ8 113 aa9.45□□□□□ -0.9
TRPV1-204ENST00000425167 SFTA2Q6UW10 78 aa9.45□□□□□ -0.9
TRPV1-204ENST00000425167 ZNRF2Q8NHG8 242 aa9.45□□□□□ -0.9
TRPV1-204ENST00000425167 ODF3Q96PU9 254 aa9.45□□□□□ -0.9
TRPV1-204ENST00000425167 PRO0461Q9UI25 63 aa9.45□□□□□ -0.9
TRPV1-204ENST00000425167 A0A0J9YY99 117 aa9.45□□□□□ -0.9
TRPV1-204ENST00000425167 TSSC4Q9Y5U2 329 aaPredicted RBP9.45□□□□□ -0.9
TRPV1-204ENST00000425167 CFAP46Q8IYW2 2715 aa9.44□□□□□ -0.9
TRPV1-204ENST00000425167 IGHV1OR15-1A0A075B7D0 117 aa9.44□□□□□ -0.9
TRPV1-204ENST00000425167 TMEM238C9JI98 176 aa9.44□□□□□ -0.9
TRPV1-204ENST00000425167 M0QY20 66 aa9.44□□□□□ -0.9
TRPV1-204ENST00000425167 ZNF876PQ49A33 203 aa9.44□□□□□ -0.9
TRPV1-204ENST00000425167 ZNF580Q9UK33 172 aa9.44□□□□□ -0.9
TRPV1-204ENST00000425167 LOC107984156A0A0G2JMH3 177 aa9.44□□□□□ -0.9
TRPV1-204ENST00000425167 K7EQG2 157 aa9.44□□□□□ -0.9
TRPV1-204ENST00000425167 TSPAN13O95857 204 aa9.44□□□□□ -0.9
TRPV1-204ENST00000425167 SYNJ2BPP57105 145 aa9.44□□□□□ -0.9
TRPV1-204ENST00000425167 ARL17AQ8IVW1 177 aa9.44□□□□□ -0.9
TRPV1-204ENST00000425167 DOPEY2Q9Y3R5 2298 aa9.43□□□□□ -0.9
TRPV1-204ENST00000425167 SORL1Q92673 2214 aa9.43□□□□□ -0.9
TRPV1-204ENST00000425167 SPAG8Q99932 426 aaPredicted RBP9.43□□□□□ -0.9
TRPV1-204ENST00000425167 FLNCQ14315 2725 aa9.43□□□□□ -0.9
TRPV1-204ENST00000425167 TRPT1Q86TN4 253 aaKnown RBP9.43□□□□□ -0.9
TRPV1-204ENST00000425167 NRGNQ92686 78 aa9.43□□□□□ -0.9
TRPV1-204ENST00000425167 DLX4Q92988 240 aaPredicted RBP9.43□□□□□ -0.9
TRPV1-204ENST00000425167 DUX5Q96PT3 197 aa9.43□□□□□ -0.9
TRPV1-204ENST00000425167 OPRPNQ99935 248 aaPredicted RBP9.43□□□□□ -0.9
TRPV1-204ENST00000425167 GTSF1LQ9H1H1 148 aa9.43□□□□□ -0.9
TRPV1-204ENST00000425167 NSUN5P1Q3KNT7 163 aa9.42□□□□□ -0.9
TRPV1-204ENST00000425167 DOPEY1Q5JWR5 2465 aa9.42□□□□□ -0.9
TRPV1-204ENST00000425167 GATA3P23771 443 aa9.42□□□□□ -0.9
TRPV1-204ENST00000425167 RHOHQ15669 191 aa9.42□□□□□ -0.9
TRPV1-204ENST00000425167 GAGE12HA6NDE8 117 aa9.41□□□□□ -0.9
TRPV1-204ENST00000425167 J3QQQ9 107 aa9.41□□□□□ -0.9
TRPV1-204ENST00000425167 LGALS3P17931 250 aaKnown RBP9.41□□□□□ -0.9
TRPV1-204ENST00000425167 PSMB2P49721 201 aa9.41□□□□□ -0.9
TRPV1-204ENST00000425167 INSL3P51460 131 aa9.41□□□□□ -0.9
TRPV1-204ENST00000425167 USP9XQ93008 2570 aaPredicted RBP9.41□□□□□ -0.9
TRPV1-204ENST00000425167 NDUFA11Q86Y39 141 aa9.41□□□□□ -0.9
TRPV1-204ENST00000425167 SIGMAR1Q99720 223 aa9.41□□□□□ -0.9
TRPV1-204ENST00000425167 IGHV3-30P01768 117 aa9.4□□□□□ -0.9
TRPV1-204ENST00000425167 IGHV3-30-5P0DP03 117 aa9.4□□□□□ -0.9
TRPV1-204ENST00000425167 AZU1P20160 251 aa9.4□□□□□ -0.9
TRPV1-204ENST00000425167 TMEM89A2RUT3 159 aa9.4□□□□□ -0.9
TRPV1-204ENST00000425167 P0DMU3 169 aa9.4□□□□□ -0.9
TRPV1-204ENST00000425167 FAM231AP0DMU4 169 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms