RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 ZNF767PQ75MW2 155 aa2.39□□□□□ -2.03
HDAC9-209ENST00000425071 DEFB125Q8N687 156 aa2.39□□□□□ -2.03
HDAC9-209ENST00000425071 FAM213BQ8TBF2 198 aa2.39□□□□□ -2.03
HDAC9-209ENST00000425071 FXYD5Q96DB9 178 aa2.39□□□□□ -2.03
HDAC9-209ENST00000425071 KCNS1Q96KK3 526 aa2.39□□□□□ -2.03
HDAC9-209ENST00000425071 NIPSNAP3BQ9BS92 247 aa2.39□□□□□ -2.03
HDAC9-209ENST00000425071 TMEM208Q9BTX3 173 aa2.39□□□□□ -2.03
HDAC9-209ENST00000425071 SLC25A2Q9BXI2 301 aa2.39□□□□□ -2.03
HDAC9-209ENST00000425071 VAX2Q9UIW0 290 aa2.39□□□□□ -2.03
HDAC9-209ENST00000425071 EPDR1Q9UM22 224 aa2.39□□□□□ -2.03
HDAC9-209ENST00000425071 DNAH3Q8TD57 4116 aa2.39□□□□□ -2.03
HDAC9-209ENST00000425071 TRAV21A0A0B4J279 112 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 TRBV6-1A0A0K0K1D8 114 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 A0A1B0GVG6 124 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 A8MTW9 85 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 FABP5P3A8MUU1 101 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 C11orf94C9JXX5 98 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 CA1P00915 261 aaPredicted RBP2.38□□□□□ -2.03
HDAC9-209ENST00000425071 OR10J4P0C629 311 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 PYYP10082 97 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 TAS2R60P59551 318 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 UBE2G1P62253 170 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 HIST1H1AQ02539 215 aaPredicted RBP2.38□□□□□ -2.03
HDAC9-209ENST00000425071 PEA15Q15121 130 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 SMUG1Q53HV7 270 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 GCSAMLQ5JQS6 135 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 APRG1Q8IVJ8 170 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 EXOC3-AS1Q8N2X6 119 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 CYB561D1Q8N8Q1 229 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 TMEM75Q8N9X5 138 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 ZNF680Q8NEM1 530 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 SMIM12Q96EX1 92 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 FMC1Q96HJ9 113 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 IGF2BP2-AS1Q96M15 143 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 LINC01587Q99440 93 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 RARRES2Q99969 163 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 EIF5A2Q9GZV4 153 aaKnown RBP2.38□□□□□ -2.03
HDAC9-209ENST00000425071 SH3BGRL3Q9H299 93 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 TREM1Q9NP99 234 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 ZNF492Q9P255 531 aa2.38□□□□□ -2.03
HDAC9-209ENST00000425071 TRAV8-2A0A0B4J237 113 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 XKRY2A2RUG3 117 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 RAB19A4D1S5 217 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 RBMY1BA6NDE4 496 aaKnown RBP2.37□□□□□ -2.03
HDAC9-209ENST00000425071 RBMY1EA6NEQ0 496 aaKnown RBP2.37□□□□□ -2.03
HDAC9-209ENST00000425071 RBFOX3A6NFN3 312 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 KNCNA6PVL3 124 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 TMEM250H0YL14 139 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 BOLA2-SMG1P6H3BVE0 249 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 PEX7O00628 323 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 RS1O15537 224 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 TCRAP04437 139 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 RBMY1DP0C7P1 496 aaKnown RBP2.37□□□□□ -2.03
HDAC9-209ENST00000425071 SPART-AS1P0CW21 52 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 CRISP2P16562 243 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 TCTAP57738 103 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 FLI1Q01543 452 aaPredicted RBP2.37□□□□□ -2.03
HDAC9-209ENST00000425071 MEF2BQ02080 365 aaPredicted RBP2.37□□□□□ -2.03
HDAC9-209ENST00000425071 SLAQ13239 276 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 TMEM183BQ1AE95 376 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 RRN3P1Q2M238 152 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 ALKAL2Q6UX46 152 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 LINC01551Q86U37 167 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 SBSPONQ8IVN8 264 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 RNF182Q8N6D2 247 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 OR11H2Q8NH07 326 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 LYPD6BQ8NI32 183 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 CHCHD10Q8WYQ3 142 aaPredicted RBP2.37□□□□□ -2.03
HDAC9-209ENST00000425071 TM2D3Q9BRN9 247 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 LINC00467Q9BRT7 94 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 AGPAT4-IT1Q9H0P7 198 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 MED9Q9NWA0 146 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 GNG13Q9P2W3 67 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 XCL2Q9UBD3 114 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 PSG8Q9UQ74 426 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 KLF12Q9Y4X4 402 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 U3KQK5 164 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 NOTCH1P46531 2555 aa2.37□□□□□ -2.03
HDAC9-209ENST00000425071 C7orf71A4D174 169 aa2.36□□□□□ -2.03
HDAC9-209ENST00000425071 LYRM9A8MSI8 78 aa2.36□□□□□ -2.03
HDAC9-209ENST00000425071 ZNF705FA8MVS1 300 aaPredicted RBP2.36□□□□□ -2.03
HDAC9-209ENST00000425071 KRTAP4-16G5E9R7 235 aaPredicted RBP2.36□□□□□ -2.03
HDAC9-209ENST00000425071 M0R3E3 92 aa2.36□□□□□ -2.03
HDAC9-209ENST00000425071 SLC17A3O00476 420 aa2.36□□□□□ -2.03
HDAC9-209ENST00000425071 SNAI2O43623 268 aa2.36□□□□□ -2.03
HDAC9-209ENST00000425071 BCL2P10415 239 aa2.36□□□□□ -2.03
HDAC9-209ENST00000425071 RNASE4P34096 147 aaKnown RBP2.36□□□□□ -2.03
HDAC9-209ENST00000425071 AKR1C3P42330 323 aa2.36□□□□□ -2.03
HDAC9-209ENST00000425071 RPS10P46783 165 aaKnown RBP2.36□□□□□ -2.03
HDAC9-209ENST00000425071 GNG4P50150 75 aa2.36□□□□□ -2.03
HDAC9-209ENST00000425071 NKX2-5P52952 324 aaPredicted RBP2.36□□□□□ -2.03
HDAC9-209ENST00000425071 FGF8P55075 233 aaPredicted RBP2.36□□□□□ -2.03
HDAC9-209ENST00000425071 UBE2G2P60604 165 aa2.36□□□□□ -2.03
HDAC9-209ENST00000425071 RPS20P60866 119 aaKnown RBP2.36□□□□□ -2.03
HDAC9-209ENST00000425071 CCL20P78556 96 aa2.36□□□□□ -2.03
HDAC9-209ENST00000425071 RPL19P84098 196 aaKnown RBP2.36□□□□□ -2.03
HDAC9-209ENST00000425071 ZNF726P1Q15940 193 aa2.36□□□□□ -2.03
HDAC9-209ENST00000425071 LGALS9BQ3B8N2 356 aa2.36□□□□□ -2.03
HDAC9-209ENST00000425071 IBA57Q5T440 356 aaKnown RBP2.36□□□□□ -2.03
HDAC9-209ENST00000425071 FAM162BQ5T6X4 162 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms