RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 ANAPC13Q9BS18 74 aa9.55□□□□□ -0.88
CTCFL-204ENST00000422869 PPDPFQ9H3Y8 114 aa9.55□□□□□ -0.88
CTCFL-204ENST00000422869 IGHV4OR15-8A0A075B7B6 117 aa9.54□□□□□ -0.88
CTCFL-204ENST00000422869 A0A087WW49 117 aa9.54□□□□□ -0.88
CTCFL-204ENST00000422869 NXPH4O95158 308 aa9.54□□□□□ -0.88
CTCFL-204ENST00000422869 POLR2KP53803 58 aaKnown RBP9.54□□□□□ -0.88
CTCFL-204ENST00000422869 FAM90A27PA6NNH2 459 aa9.54□□□□□ -0.88
CTCFL-204ENST00000422869 SCGB1C2P0DMR2 95 aa9.54□□□□□ -0.88
CTCFL-204ENST00000422869 TMEM170BQ5T4T1 132 aa9.54□□□□□ -0.88
CTCFL-204ENST00000422869 SLC25A20O43772 301 aa9.54□□□□□ -0.88
CTCFL-204ENST00000422869 ZNF876PQ49A33 203 aa9.54□□□□□ -0.88
CTCFL-204ENST00000422869 UNQ9165/PRO28630Q6UXU0 137 aa9.54□□□□□ -0.88
CTCFL-204ENST00000422869 APRG1Q8IVJ8 170 aa9.54□□□□□ -0.88
CTCFL-204ENST00000422869 TLN1Q9Y490 2541 aaKnown RBP9.53□□□□□ -0.88
CTCFL-204ENST00000422869 F6UB75 175 aa9.53□□□□□ -0.88
CTCFL-204ENST00000422869 J3QQQ9 107 aa9.53□□□□□ -0.88
CTCFL-204ENST00000422869 OVOL1O14753 267 aa9.53□□□□□ -0.88
CTCFL-204ENST00000422869 ZFAND6Q6FIF0 208 aa9.53□□□□□ -0.88
CTCFL-204ENST00000422869 TRPT1Q86TN4 253 aaKnown RBP9.53□□□□□ -0.88
CTCFL-204ENST00000422869 TMEM141Q96I45 108 aa9.53□□□□□ -0.88
CTCFL-204ENST00000422869 RAX2Q96IS3 184 aa9.53□□□□□ -0.88
CTCFL-204ENST00000422869 TIMM17AQ99595 171 aa9.53□□□□□ -0.88
CTCFL-204ENST00000422869 VPS13CQ709C8 3753 aa9.53□□□□□ -0.88
CTCFL-204ENST00000422869 TMEM262E9PQX1 116 aa9.53□□□□□ -0.88
CTCFL-204ENST00000422869 JPT2Q9H910 190 aa9.53□□□□□ -0.88
CTCFL-204ENST00000422869 C9JAW5 83 aa9.52□□□□□ -0.88
CTCFL-204ENST00000422869 SUMO4Q6EEV6 95 aa9.52□□□□□ -0.88
CTCFL-204ENST00000422869 C11orf71Q6IPW1 123 aa9.52□□□□□ -0.88
CTCFL-204ENST00000422869 IGHV3-33P01772 117 aa9.52□□□□□ -0.89
CTCFL-204ENST00000422869 NHLRC4P0CG21 123 aaPredicted RBP9.52□□□□□ -0.89
CTCFL-204ENST00000422869 SAA4P35542 130 aa9.52□□□□□ -0.89
CTCFL-204ENST00000422869 SRD5A1P18405 259 aa9.51□□□□□ -0.89
CTCFL-204ENST00000422869 TEX29Q8N6K0 151 aa9.51□□□□□ -0.89
CTCFL-204ENST00000422869 TMEM263Q8WUH6 116 aaKnown RBP9.51□□□□□ -0.89
CTCFL-204ENST00000422869 TTC28Q96AY4 2481 aa9.51□□□□□ -0.89
CTCFL-204ENST00000422869 TRBV12-3P01733 135 aa9.51□□□□□ -0.89
CTCFL-204ENST00000422869 ELANEP08246 267 aa9.51□□□□□ -0.89
CTCFL-204ENST00000422869 UBE2E1P51965 193 aa9.51□□□□□ -0.89
CTCFL-204ENST00000422869 C5orf56Q8N8D9 126 aa9.51□□□□□ -0.89
CTCFL-204ENST00000422869 VCYO14598 125 aa9.5□□□□□ -0.89
CTCFL-204ENST00000422869 LGALS3P17931 250 aaKnown RBP9.5□□□□□ -0.89
CTCFL-204ENST00000422869 CDSNQ15517 529 aa9.5□□□□□ -0.89
CTCFL-204ENST00000422869 LINC00527Q9UJ94 153 aa9.5□□□□□ -0.89
CTCFL-204ENST00000422869 A0A087WWL8 130 aa9.5□□□□□ -0.89
CTCFL-204ENST00000422869 SDHAF1A6NFY7 115 aa9.5□□□□□ -0.89
CTCFL-204ENST00000422869 FBXL19-AS1Q494R0 122 aa9.5□□□□□ -0.89
CTCFL-204ENST00000422869 C19orf54Q5BKX5 351 aa9.5□□□□□ -0.89
CTCFL-204ENST00000422869 TRBV27A0A0K0K1C4 114 aa9.49□□□□□ -0.89
CTCFL-204ENST00000422869 RHODO00212 210 aa9.49□□□□□ -0.89
CTCFL-204ENST00000422869 OPRPNQ99935 248 aaPredicted RBP9.49□□□□□ -0.89
CTCFL-204ENST00000422869 A0A0B4J2C4 111 aa9.48□□□□□ -0.89
CTCFL-204ENST00000422869 TMEM223A0PJW6 202 aa9.48□□□□□ -0.89
CTCFL-204ENST00000422869 CRLF1O75462 422 aa9.48□□□□□ -0.89
CTCFL-204ENST00000422869 P0DMU3 169 aa9.48□□□□□ -0.89
CTCFL-204ENST00000422869 FAM231AP0DMU4 169 aa9.48□□□□□ -0.89
CTCFL-204ENST00000422869 FAM231CP0DMU5 169 aa9.48□□□□□ -0.89
CTCFL-204ENST00000422869 VPREB3Q9UKI3 123 aa9.48□□□□□ -0.89
CTCFL-204ENST00000422869 FAM223BA6NKX1 122 aa9.48□□□□□ -0.89
CTCFL-204ENST00000422869 H7C2G1 150 aa9.48□□□□□ -0.89
CTCFL-204ENST00000422869 TMEM219Q86XT9 240 aa9.48□□□□□ -0.89
CTCFL-204ENST00000422869 FAM223AQ8IWN6 122 aa9.48□□□□□ -0.89
CTCFL-204ENST00000422869 TRAV41A0A0B4J266 112 aa9.48□□□□□ -0.89
CTCFL-204ENST00000422869 TRAV4A0A0B4J268 109 aa9.48□□□□□ -0.89
CTCFL-204ENST00000422869 MUSTN1Q8IVN3 82 aa9.48□□□□□ -0.89
CTCFL-204ENST00000422869 TRAV2A0A0B4J234 112 aa9.47□□□□□ -0.89
CTCFL-204ENST00000422869 LEPROTO15243 131 aa9.47□□□□□ -0.89
CTCFL-204ENST00000422869 Q8N1Y9 231 aa9.47□□□□□ -0.89
CTCFL-204ENST00000422869 NTN5Q8WTR8 489 aaPredicted RBP9.47□□□□□ -0.89
CTCFL-204ENST00000422869 IGKV3-7A0A075B6H7 116 aa9.47□□□□□ -0.89
CTCFL-204ENST00000422869 KLLNB2CW77 178 aa9.47□□□□□ -0.89
CTCFL-204ENST00000422869 F5H697 171 aa9.47□□□□□ -0.89
CTCFL-204ENST00000422869 NDUFA4O00483 81 aa9.47□□□□□ -0.89
CTCFL-204ENST00000422869 RPL11P62913 178 aaKnown RBP9.47□□□□□ -0.89
CTCFL-204ENST00000422869 TRBV6-5A0A0K0K1A5 114 aa9.46□□□□□ -0.89
CTCFL-204ENST00000422869 LGALS9O00182 355 aa9.46□□□□□ -0.89
CTCFL-204ENST00000422869 C3orf56Q8N813 242 aa9.46□□□□□ -0.89
CTCFL-204ENST00000422869 IGHV3-64A0A075B6Q5 118 aa9.46□□□□□ -0.9
CTCFL-204ENST00000422869 NDUFV3P56181 108 aaKnown RBP9.46□□□□□ -0.9
CTCFL-204ENST00000422869 ZNF256Q9Y2P7 627 aaPredicted RBP9.46□□□□□ -0.9
CTCFL-204ENST00000422869 SPTBN1Q01082 2364 aaKnown RBP9.46□□□□□ -0.9
CTCFL-204ENST00000422869 IGHV1-69P01742 117 aa9.45□□□□□ -0.9
CTCFL-204ENST00000422869 ZNF22P17026 224 aaPredicted RBP9.45□□□□□ -0.9
CTCFL-204ENST00000422869 LINC01620Q4KN68 170 aa9.45□□□□□ -0.9
CTCFL-204ENST00000422869 LINC01600Q96MT4 127 aa9.45□□□□□ -0.9
CTCFL-204ENST00000422869 PIMREGQ9BSJ6 248 aa9.45□□□□□ -0.9
CTCFL-204ENST00000422869 ZNF580Q9UK33 172 aa9.45□□□□□ -0.9
CTCFL-204ENST00000422869 RIF1Q5UIP0 2472 aaKnown RBP9.45□□□□□ -0.9
CTCFL-204ENST00000422869 TRAV25A0A0B4J276 109 aa9.45□□□□□ -0.9
CTCFL-204ENST00000422869 TEX49A0A1B0GTD5 131 aa9.45□□□□□ -0.9
CTCFL-204ENST00000422869 SNCGO76070 127 aa9.45□□□□□ -0.9
CTCFL-204ENST00000422869 GAGE2BQ13066 116 aa9.45□□□□□ -0.9
CTCFL-204ENST00000422869 GAGE2EQ4V326 116 aa9.45□□□□□ -0.9
CTCFL-204ENST00000422869 FAM159AQ6UWV7 190 aa9.45□□□□□ -0.9
CTCFL-204ENST00000422869 GAGE2DQ9UEU5 116 aa9.45□□□□□ -0.9
CTCFL-204ENST00000422869 ATXN8Q156A1 80 aa9.45□□□□□ -0.9
CTCFL-204ENST00000422869 NPFFO15130 113 aa9.44□□□□□ -0.9
CTCFL-204ENST00000422869 TCF15Q12870 199 aa9.44□□□□□ -0.9
CTCFL-204ENST00000422869 NSUN5P1Q3KNT7 163 aa9.44□□□□□ -0.9
CTCFL-204ENST00000422869 C5orf47Q569G3 176 aa9.44□□□□□ -0.9
CTCFL-204ENST00000422869 FAM74A4Q5TZK3 123 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms