RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 DUX3Q96PT4 197 aa11.96□□□□□ -0.49
CTSB-203ENST00000420692 POLR2KP53803 58 aaKnown RBP11.95□□□□□ -0.5
CTSB-203ENST00000420692 DEFB104AQ8WTQ1 72 aa11.95□□□□□ -0.5
CTSB-203ENST00000420692 SCGB3A1Q96QR1 104 aa11.95□□□□□ -0.5
CTSB-203ENST00000420692 TRAV12-1A0A0B4J245 112 aa11.95□□□□□ -0.5
CTSB-203ENST00000420692 K7EMI3 77 aa11.95□□□□□ -0.5
CTSB-203ENST00000420692 RBMY1A1P0DJD3 496 aaKnown RBP11.95□□□□□ -0.5
CTSB-203ENST00000420692 RBMY1CP0DJD4 496 aa11.95□□□□□ -0.5
CTSB-203ENST00000420692 RBMY1FQ15415 496 aaKnown RBP11.95□□□□□ -0.5
CTSB-203ENST00000420692 C2orf66Q6UXQ4 117 aa11.95□□□□□ -0.5
CTSB-203ENST00000420692 NEXN-AS1Q8NBZ9 246 aa11.95□□□□□ -0.5
CTSB-203ENST00000420692 ANK3Q12955 4377 aaKnown RBP11.95□□□□□ -0.5
CTSB-203ENST00000420692 IGHV1OR15-1A0A075B7D0 117 aa11.94□□□□□ -0.5
CTSB-203ENST00000420692 SEC11AP67812 179 aa11.94□□□□□ -0.5
CTSB-203ENST00000420692 HSD52Q0P140 79 aa11.94□□□□□ -0.5
CTSB-203ENST00000420692 HIST2H2BCQ6DN03 193 aa11.94□□□□□ -0.5
CTSB-203ENST00000420692 FOXI2Q6ZQN5 318 aa11.94□□□□□ -0.5
CTSB-203ENST00000420692 MAPKAPK5-AS1Q8N8E1 139 aa11.94□□□□□ -0.5
CTSB-203ENST00000420692 TRAV8-6A0A0B4J262 113 aa11.94□□□□□ -0.5
CTSB-203ENST00000420692 KNCNA6PVL3 124 aa11.94□□□□□ -0.5
CTSB-203ENST00000420692 WFDC11Q8NEX6 87 aa11.94□□□□□ -0.5
CTSB-203ENST00000420692 ITPR2Q14571 2701 aa11.93□□□□□ -0.5
CTSB-203ENST00000420692 PPP1R17O96001 155 aa11.93□□□□□ -0.5
CTSB-203ENST00000420692 CRYGDP07320 174 aa11.93□□□□□ -0.5
CTSB-203ENST00000420692 RPL32P62910 135 aaKnown RBP11.93□□□□□ -0.5
CTSB-203ENST00000420692 VAMP3Q15836 100 aa11.93□□□□□ -0.5
CTSB-203ENST00000420692 MORN3Q6PF18 240 aaPredicted RBP11.93□□□□□ -0.5
CTSB-203ENST00000420692 OR11H1Q8NG94 326 aa11.93□□□□□ -0.5
CTSB-203ENST00000420692 BAALCQ8WXS3 180 aa11.93□□□□□ -0.5
CTSB-203ENST00000420692 F8VRH5 84 aa11.92□□□□□ -0.5
CTSB-203ENST00000420692 H7C1H1 209 aa11.92□□□□□ -0.5
CTSB-203ENST00000420692 DUSP14O95147 198 aaKnown RBP11.92□□□□□ -0.5
CTSB-203ENST00000420692 NIPBLQ6KC79 2804 aaeCLIP11.92□□□□□ -0.55e-6■□□□□ 8.1
CTSB-203ENST00000420692 RBMY1BA6NDE4 496 aaKnown RBP11.92□□□□□ -0.5
CTSB-203ENST00000420692 RBMY1EA6NEQ0 496 aaKnown RBP11.92□□□□□ -0.5
CTSB-203ENST00000420692 TSHBP01222 138 aa11.92□□□□□ -0.5
CTSB-203ENST00000420692 RBMY1DP0C7P1 496 aaKnown RBP11.92□□□□□ -0.5
CTSB-203ENST00000420692 AMMECR1LQ6DCA0 310 aa11.92□□□□□ -0.5
CTSB-203ENST00000420692 ACANP16112 2415 aa11.92□□□□□ -0.5
CTSB-203ENST00000420692 TRBV25-1A0A075B6N4 114 aa11.91□□□□□ -0.5
CTSB-203ENST00000420692 LINC01619G3V211 115 aa11.91□□□□□ -0.5
CTSB-203ENST00000420692 K7EP13 123 aa11.91□□□□□ -0.5
CTSB-203ENST00000420692 HIGD1BQ9P298 99 aa11.91□□□□□ -0.5
CTSB-203ENST00000420692 SETD2Q9BYW2 2564 aaPredicted RBP11.91□□□□□ -0.5
CTSB-203ENST00000420692 PLNP26678 52 aa11.91□□□□□ -0.5
CTSB-203ENST00000420692 DEFB131AP59861 70 aa11.91□□□□□ -0.5
CTSB-203ENST00000420692 DLX4Q92988 240 aaPredicted RBP11.91□□□□□ -0.5
CTSB-203ENST00000420692 CHTOPQ9Y3Y2 248 aaKnown RBP11.91□□□□□ -0.5
CTSB-203ENST00000420692 PRSS29PA6NIE9 313 aa11.9□□□□□ -0.5
CTSB-203ENST00000420692 A8MTW9 85 aa11.9□□□□□ -0.5
CTSB-203ENST00000420692 F5H697 171 aa11.9□□□□□ -0.5
CTSB-203ENST00000420692 HLA-DRB4P13762 266 aa11.9□□□□□ -0.5
CTSB-203ENST00000420692 FAM74A4Q5TZK3 123 aa11.9□□□□□ -0.5
CTSB-203ENST00000420692 ZFP2Q6ZN57 461 aa11.9□□□□□ -0.5
CTSB-203ENST00000420692 TMEM61Q8N0U2 210 aa11.9□□□□□ -0.5
CTSB-203ENST00000420692 C4orf3Q8WVX3 66 aa11.9□□□□□ -0.5
CTSB-203ENST00000420692 HLA-DRB4X5D2U9 266 aa11.9□□□□□ -0.5
CTSB-203ENST00000420692 M0QY20 66 aa11.9□□□□□ -0.51
CTSB-203ENST00000420692 PRM2P04554 102 aa11.9□□□□□ -0.51
CTSB-203ENST00000420692 Q6ZSV7 163 aa11.9□□□□□ -0.51
CTSB-203ENST00000420692 TRBV6-5A0A0K0K1A5 114 aa11.89□□□□□ -0.51
CTSB-203ENST00000420692 SDHAF1A6NFY7 115 aa11.88□□□□□ -0.51
CTSB-203ENST00000420692 IGIPA6NJ69 53 aa11.88□□□□□ -0.51
CTSB-203ENST00000420692 H3BMM0 161 aa11.88□□□□□ -0.51
CTSB-203ENST00000420692 RPL39P62891 51 aaKnown RBP11.88□□□□□ -0.51
CTSB-203ENST00000420692 CHAC1Q9BUX1 264 aa11.88□□□□□ -0.51
CTSB-203ENST00000420692 WNK1Q9H4A3 2382 aa11.88□□□□□ -0.51
CTSB-203ENST00000420692 TRBV27A0A0K0K1C4 114 aa11.88□□□□□ -0.51
CTSB-203ENST00000420692 H3BRM9 83 aa11.88□□□□□ -0.51
CTSB-203ENST00000420692 VCYO14598 125 aa11.88□□□□□ -0.51
CTSB-203ENST00000420692 FXYD2P54710 66 aa11.88□□□□□ -0.51
CTSB-203ENST00000420692 JMJD8Q96S16 334 aa11.88□□□□□ -0.51
CTSB-203ENST00000420692 TP53TG1Q9Y2A0 90 aa11.87□□□□□ -0.51
CTSB-203ENST00000420692 HELZ2Q9BYK8 2649 aaKnown RBP11.87□□□□□ -0.51
CTSB-203ENST00000420692 A6NDN8 102 aa11.87□□□□□ -0.51
CTSB-203ENST00000420692 ZNF876PQ49A33 203 aa11.87□□□□□ -0.51
CTSB-203ENST00000420692 SYT8Q8NBV8 401 aa11.87□□□□□ -0.51
CTSB-203ENST00000420692 ESM1Q9NQ30 184 aa11.87□□□□□ -0.51
CTSB-203ENST00000420692 C9orf118A6NHY6 69 aa11.86□□□□□ -0.51
CTSB-203ENST00000420692 KHDC1LQ5JSQ8 128 aa11.86□□□□□ -0.51
CTSB-203ENST00000420692 TMEM86BQ8N661 226 aa11.86□□□□□ -0.51
CTSB-203ENST00000420692 KLHL30-AS1Q8NEE0 82 aa11.86□□□□□ -0.51
CTSB-203ENST00000420692 NAA38Q9BRA0 125 aaKnown RBP11.86□□□□□ -0.51
CTSB-203ENST00000420692 CYSLTR1Q9Y271 337 aa11.86□□□□□ -0.51
CTSB-203ENST00000420692 DNAJC9-AS1A6NH13 148 aa11.86□□□□□ -0.51
CTSB-203ENST00000420692 ZNF56Q15929 161 aa11.86□□□□□ -0.51
CTSB-203ENST00000420692 DEFB114Q30KQ6 69 aa11.86□□□□□ -0.51
CTSB-203ENST00000420692 ZNF256Q9Y2P7 627 aaPredicted RBP11.86□□□□□ -0.51
CTSB-203ENST00000420692 NACAE9PAV3 2078 aa11.86□□□□□ -0.51
CTSB-203ENST00000420692 MTORP42345 2549 aa11.85□□□□□ -0.51
CTSB-203ENST00000420692 RIPPLY3P57055 190 aa11.85□□□□□ -0.51
CTSB-203ENST00000420692 OR4C5Q8NGB2 326 aa11.85□□□□□ -0.51
CTSB-203ENST00000420692 IGLV4-69A0A075B6H9 119 aa11.84□□□□□ -0.51
CTSB-203ENST00000420692 TRAV2A0A0B4J234 112 aa11.84□□□□□ -0.51
CTSB-203ENST00000420692 GCSHP23434 173 aa11.84□□□□□ -0.51
CTSB-203ENST00000420692 MAP6D1Q9H9H5 199 aa11.84□□□□□ -0.51
CTSB-203ENST00000420692 PEMTQ9UBM1 199 aa11.84□□□□□ -0.51
CTSB-203ENST00000420692 KRTAP1-1Q07627 177 aa11.84□□□□□ -0.51
CTSB-203ENST00000420692 RAB37Q96AX2 223 aa11.84□□□□□ -0.51
CTSB-203ENST00000420692 KIR2DL4Q99706 377 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 187.9 ms