RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 SCRT2Q9NQ03 307 aa7.39□□□□□ -1.23
SSBP3-206ENST00000420121 ZFP30Q9Y2G7 519 aa7.39□□□□□ -1.23
SSBP3-206ENST00000420121 FAT1Q14517 4588 aa7.39□□□□□ -1.23
SSBP3-206ENST00000420121 M0R036 132 aa7.38□□□□□ -1.23
SSBP3-206ENST00000420121 LTAP01374 205 aa7.38□□□□□ -1.23
SSBP3-206ENST00000420121 ARMS2P0C7Q2 107 aa7.38□□□□□ -1.23
SSBP3-206ENST00000420121 S100A4P26447 101 aaKnown RBP7.38□□□□□ -1.23
SSBP3-206ENST00000420121 SLC51BQ86UW2 128 aa7.38□□□□□ -1.23
SSBP3-206ENST00000420121 C14orf178Q8N769 122 aaPredicted RBP7.38□□□□□ -1.23
SSBP3-206ENST00000420121 ATP6V0E2Q8NHE4 81 aa7.38□□□□□ -1.23
SSBP3-206ENST00000420121 MBD3L1Q8WWY6 194 aa7.38□□□□□ -1.23
SSBP3-206ENST00000420121 DNAH8Q96JB1 4490 aa7.38□□□□□ -1.23
SSBP3-206ENST00000420121 TRAV8-6A0A0B4J262 113 aa7.37□□□□□ -1.23
SSBP3-206ENST00000420121 A0A1B0GVG6 124 aa7.37□□□□□ -1.23
SSBP3-206ENST00000420121 GRIFINA4D1Z8 144 aa7.37□□□□□ -1.23
SSBP3-206ENST00000420121 GAGE12JA6NER3 117 aa7.37□□□□□ -1.23
SSBP3-206ENST00000420121 HMSDA8MTL9 139 aa7.37□□□□□ -1.23
SSBP3-206ENST00000420121 PAGE4O60829 102 aa7.37□□□□□ -1.23
SSBP3-206ENST00000420121 IGHV3-30P01768 117 aa7.37□□□□□ -1.23
SSBP3-206ENST00000420121 IGHV3-33P01772 117 aa7.37□□□□□ -1.23
SSBP3-206ENST00000420121 SEC11BP0C7V7 166 aa7.37□□□□□ -1.23
SSBP3-206ENST00000420121 IGHV3-30-3P0DP02 117 aa7.37□□□□□ -1.23
SSBP3-206ENST00000420121 IGHV3-30-5P0DP03 117 aa7.37□□□□□ -1.23
SSBP3-206ENST00000420121 GAGE1Q13065 139 aa7.37□□□□□ -1.23
SSBP3-206ENST00000420121 GAGE4Q13068 117 aa7.37□□□□□ -1.23
SSBP3-206ENST00000420121 GAGE5Q13069 117 aa7.37□□□□□ -1.23
SSBP3-206ENST00000420121 LGALSLQ3ZCW2 172 aaPredicted RBP7.37□□□□□ -1.23
SSBP3-206ENST00000420121 GAGE13Q4V321 117 aa7.37□□□□□ -1.23
SSBP3-206ENST00000420121 OR10J3Q5JRS4 329 aa7.37□□□□□ -1.23
SSBP3-206ENST00000420121 FAM162BQ5T6X4 162 aa7.37□□□□□ -1.23
SSBP3-206ENST00000420121 TCEAL7Q9BRU2 100 aa7.37□□□□□ -1.23
SSBP3-206ENST00000420121 UBE2G1P62253 170 aa7.36□□□□□ -1.23
SSBP3-206ENST00000420121 CST9LP1Q5W188 147 aa7.36□□□□□ -1.23
SSBP3-206ENST00000420121 SCO2A0A1W2PP80 73 aa7.35□□□□□ -1.23
SSBP3-206ENST00000420121 BCL2L11O43521 198 aa7.35□□□□□ -1.23
SSBP3-206ENST00000420121 AKR1C3P42330 323 aa7.35□□□□□ -1.23
SSBP3-206ENST00000420121 STOML3Q8TAV4 291 aa7.35□□□□□ -1.23
SSBP3-206ENST00000420121 FAM213BQ8TBF2 198 aa7.35□□□□□ -1.23
SSBP3-206ENST00000420121 SFT2D1Q8WV19 159 aa7.35□□□□□ -1.23
SSBP3-206ENST00000420121 SFRP2Q96HF1 295 aa7.35□□□□□ -1.23
SSBP3-206ENST00000420121 MLST8Q9BVC4 326 aa7.35□□□□□ -1.23
SSBP3-206ENST00000420121 Q9HAA7 133 aa7.35□□□□□ -1.23
SSBP3-206ENST00000420121 A0A087WWL8 130 aa7.34□□□□□ -1.23
SSBP3-206ENST00000420121 TMSB15BA0A087X1C1 80 aa7.34□□□□□ -1.23
SSBP3-206ENST00000420121 A0A0D9SG52 128 aa7.34□□□□□ -1.23
SSBP3-206ENST00000420121 A0A1B0GV50 99 aa7.34□□□□□ -1.23
SSBP3-206ENST00000420121 UMAD1C9J7I0 102 aa7.34□□□□□ -1.23
SSBP3-206ENST00000420121 RHODO00212 210 aa7.34□□□□□ -1.23
SSBP3-206ENST00000420121 RPL19P84098 196 aaKnown RBP7.34□□□□□ -1.23
SSBP3-206ENST00000420121 WFDC2Q14508 124 aa7.34□□□□□ -1.23
SSBP3-206ENST00000420121 LAGE3Q14657 143 aa7.34□□□□□ -1.23
SSBP3-206ENST00000420121 ZNF471Q9BX82 626 aaPredicted RBP7.34□□□□□ -1.23
SSBP3-206ENST00000420121 SRRM2Q9UQ35 2752 aaKnown RBP7.33□□□□□ -1.24
SSBP3-206ENST00000420121 M0R381 172 aa7.33□□□□□ -1.24
SSBP3-206ENST00000420121 GCSHP23434 173 aa7.33□□□□□ -1.24
SSBP3-206ENST00000420121 S100A12P80511 92 aa7.33□□□□□ -1.24
SSBP3-206ENST00000420121 FAM74A4Q5TZK3 123 aa7.33□□□□□ -1.24
SSBP3-206ENST00000420121 DAZ4Q86SG3 579 aaKnown RBP7.33□□□□□ -1.24
SSBP3-206ENST00000420121 Q8N814 137 aa7.33□□□□□ -1.24
SSBP3-206ENST00000420121 SYT8Q8NBV8 401 aa7.33□□□□□ -1.24
SSBP3-206ENST00000420121 DAZ3Q9NR90 486 aaKnown RBP7.33□□□□□ -1.24
SSBP3-206ENST00000420121 PHLDA3Q9Y5J5 127 aa7.33□□□□□ -1.24
SSBP3-206ENST00000420121 KANTRA0A1W2PQU2 76 aa7.32□□□□□ -1.24
SSBP3-206ENST00000420121 PSCAO43653 123 aa7.32□□□□□ -1.24
SSBP3-206ENST00000420121 CXCL1P09341 107 aa7.32□□□□□ -1.24
SSBP3-206ENST00000420121 TPT1P13693 172 aaKnown RBP7.32□□□□□ -1.24
SSBP3-206ENST00000420121 CCL20P78556 96 aa7.32□□□□□ -1.24
SSBP3-206ENST00000420121 TMUB2Q71RG4 321 aa7.32□□□□□ -1.24
SSBP3-206ENST00000420121 ZFP82Q8N141 532 aa7.32□□□□□ -1.24
SSBP3-206ENST00000420121 OR10AG1Q8NH19 301 aa7.32□□□□□ -1.24
SSBP3-206ENST00000420121 DNAJC30Q96LL9 226 aa7.32□□□□□ -1.24
SSBP3-206ENST00000420121 SSBP4Q9BWG4 385 aaPredicted RBP7.32□□□□□ -1.24
SSBP3-206ENST00000420121 IGLV5-52A0A0A0MRZ9 124 aa7.31□□□□□ -1.24
SSBP3-206ENST00000420121 EPM2AB3EWF7 344 aa7.31□□□□□ -1.24
SSBP3-206ENST00000420121 SNAI2O43623 268 aa7.31□□□□□ -1.24
SSBP3-206ENST00000420121 S100A9P06702 114 aaKnown RBP7.31□□□□□ -1.24
SSBP3-206ENST00000420121 H2AFB1P0C5Y9 115 aa7.31□□□□□ -1.24
SSBP3-206ENST00000420121 UBE2D3P61077 147 aa7.31□□□□□ -1.24
SSBP3-206ENST00000420121 UBE2D2P62837 147 aa7.31□□□□□ -1.24
SSBP3-206ENST00000420121 NIT1Q86X76 327 aa7.31□□□□□ -1.24
SSBP3-206ENST00000420121 CLRN3Q8NCR9 226 aa7.31□□□□□ -1.24
SSBP3-206ENST00000420121 NTN5Q8WTR8 489 aaPredicted RBP7.31□□□□□ -1.24
SSBP3-206ENST00000420121 A0A087WWC5 75 aa7.3□□□□□ -1.24
SSBP3-206ENST00000420121 TRBV10-1A0A0K0K1A3 114 aa7.3□□□□□ -1.24
SSBP3-206ENST00000420121 HAMPP81172 84 aa7.3□□□□□ -1.24
SSBP3-206ENST00000420121 PRR27Q6MZM9 219 aa7.3□□□□□ -1.24
SSBP3-206ENST00000420121 BAGE2Q86Y30 109 aa7.3□□□□□ -1.24
SSBP3-206ENST00000420121 OR10G8Q8NGN5 311 aa7.3□□□□□ -1.24
SSBP3-206ENST00000420121 C11orf52Q96A22 123 aa7.3□□□□□ -1.24
SSBP3-206ENST00000420121 DERL1Q9BUN8 251 aa7.3□□□□□ -1.24
SSBP3-206ENST00000420121 AP5S1Q9NUS5 200 aa7.3□□□□□ -1.24
SSBP3-206ENST00000420121 FAM30AQ9NZY2 134 aa7.3□□□□□ -1.24
SSBP3-206ENST00000420121 TRAV1-1A0A0B4J248 108 aa7.29□□□□□ -1.24
SSBP3-206ENST00000420121 IGLV2-8P01709 118 aa7.29□□□□□ -1.24
SSBP3-206ENST00000420121 OR5AL1P0C617 328 aa7.29□□□□□ -1.24
SSBP3-206ENST00000420121 RPL35P42766 123 aaKnown RBP7.29□□□□□ -1.24
SSBP3-206ENST00000420121 Q5VSD8 79 aa7.29□□□□□ -1.24
SSBP3-206ENST00000420121 AKAP14Q86UN6 197 aa7.29□□□□□ -1.24
SSBP3-206ENST00000420121 NEXN-AS1Q8NBZ9 246 aa7.29□□□□□ -1.24
SSBP3-206ENST00000420121 TMEM70Q9BUB7 260 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms