RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 RHODO00212 210 aa10.21□□□□□ -0.78
SHMT1P1-201ENST00000419974 RS1O15537 224 aa10.21□□□□□ -0.78
SHMT1P1-201ENST00000419974 AMN1Q8IY45 258 aa10.21□□□□□ -0.78
SHMT1P1-201ENST00000419974 ALKBH7Q9BT30 221 aaPredicted RBP10.21□□□□□ -0.78
SHMT1P1-201ENST00000419974 MUC4Q99102 2169 aa10.2□□□□□ -0.78
SHMT1P1-201ENST00000419974 TEX48A0A1B0GUV7 120 aa10.2□□□□□ -0.78
SHMT1P1-201ENST00000419974 PRSS47A8MTI9 375 aa10.2□□□□□ -0.78
SHMT1P1-201ENST00000419974 HIST1H2BKO60814 126 aa10.2□□□□□ -0.78
SHMT1P1-201ENST00000419974 PPP1R17O96001 155 aa10.2□□□□□ -0.78
SHMT1P1-201ENST00000419974 HIST1H2BJP06899 126 aa10.2□□□□□ -0.78
SHMT1P1-201ENST00000419974 HIST1H2BOP23527 126 aa10.2□□□□□ -0.78
SHMT1P1-201ENST00000419974 HIST1H2BBP33778 126 aa10.2□□□□□ -0.78
SHMT1P1-201ENST00000419974 HIST1H2BDP58876 126 aa10.2□□□□□ -0.78
SHMT1P1-201ENST00000419974 HIST1H2BCP62807 126 aa10.2□□□□□ -0.78
SHMT1P1-201ENST00000419974 Q0VG73 95 aa10.2□□□□□ -0.78
SHMT1P1-201ENST00000419974 HIST2H2BEQ16778 126 aa10.2□□□□□ -0.78
SHMT1P1-201ENST00000419974 MRPL51Q4U2R6 128 aaKnown RBP10.2□□□□□ -0.78
SHMT1P1-201ENST00000419974 COA6Q5JTJ3 125 aaKnown RBP10.2□□□□□ -0.78
SHMT1P1-201ENST00000419974 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.2□□□□□ -0.78
SHMT1P1-201ENST00000419974 HIST1H2BHQ93079 126 aa10.2□□□□□ -0.78
SHMT1P1-201ENST00000419974 HIST1H2BNQ99877 126 aa10.2□□□□□ -0.78
SHMT1P1-201ENST00000419974 HIST1H2BMQ99879 126 aa10.2□□□□□ -0.78
SHMT1P1-201ENST00000419974 TM2D3Q9BRN9 247 aa10.2□□□□□ -0.78
SHMT1P1-201ENST00000419974 SMIM17P0DL12 118 aa10.19□□□□□ -0.78
SHMT1P1-201ENST00000419974 OR10J3Q5JRS4 329 aa10.19□□□□□ -0.78
SHMT1P1-201ENST00000419974 CFAP126Q5VTH2 177 aa10.19□□□□□ -0.78
SHMT1P1-201ENST00000419974 ORMDL3Q8N138 153 aa10.19□□□□□ -0.78
SHMT1P1-201ENST00000419974 C14orf178Q8N769 122 aaPredicted RBP10.19□□□□□ -0.78
SHMT1P1-201ENST00000419974 C11orf68Q9H3H3 251 aaKnown RBP10.19□□□□□ -0.78
SHMT1P1-201ENST00000419974 NOP10Q9NPE3 64 aaKnown RBP10.19□□□□□ -0.78
SHMT1P1-201ENST00000419974 NBEAL2Q6ZNJ1 2754 aa10.18□□□□□ -0.78
SHMT1P1-201ENST00000419974 TRAV4A0A0B4J268 109 aa10.18□□□□□ -0.78
SHMT1P1-201ENST00000419974 DEFB121Q5J5C9 76 aa10.18□□□□□ -0.78
SHMT1P1-201ENST00000419974 TRGV1A0A0A0MS02 117 aa10.17□□□□□ -0.78
SHMT1P1-201ENST00000419974 IGHV4-28A0A0C4DH34 117 aa10.17□□□□□ -0.78
SHMT1P1-201ENST00000419974 SPATA25Q9BR10 227 aa10.17□□□□□ -0.78
SHMT1P1-201ENST00000419974 DKK2Q9UBU2 259 aa10.17□□□□□ -0.78
SHMT1P1-201ENST00000419974 COL7A1Q02388 2944 aa10.16□□□□□ -0.78
SHMT1P1-201ENST00000419974 SRIP30626 198 aa10.16□□□□□ -0.78
SHMT1P1-201ENST00000419974 CKS2P33552 79 aa10.16□□□□□ -0.78
SHMT1P1-201ENST00000419974 SSTP61278 116 aa10.16□□□□□ -0.78
SHMT1P1-201ENST00000419974 RPL32P62910 135 aaKnown RBP10.16□□□□□ -0.78
SHMT1P1-201ENST00000419974 Q6ZTI0 123 aa10.16□□□□□ -0.78
SHMT1P1-201ENST00000419974 SBSPONQ8IVN8 264 aa10.16□□□□□ -0.78
SHMT1P1-201ENST00000419974 B9D2Q9BPU9 175 aa10.16□□□□□ -0.78
SHMT1P1-201ENST00000419974 SAMD10Q9BYL1 202 aa10.16□□□□□ -0.78
SHMT1P1-201ENST00000419974 JPT2Q9H910 190 aa10.16□□□□□ -0.78
SHMT1P1-201ENST00000419974 DNAH9Q9NYC9 4486 aa10.16□□□□□ -0.78
SHMT1P1-201ENST00000419974 TRBV6-5A0A0K0K1A5 114 aa10.15□□□□□ -0.78
SHMT1P1-201ENST00000419974 D6R8Y8 96 aa10.15□□□□□ -0.78
SHMT1P1-201ENST00000419974 IGHV3-53P01767 116 aa10.15□□□□□ -0.78
SHMT1P1-201ENST00000419974 KIAA1644Q3SXP7 199 aa10.15□□□□□ -0.78
SHMT1P1-201ENST00000419974 C20orf78Q9BR46 151 aa10.15□□□□□ -0.78
SHMT1P1-201ENST00000419974 MRPL16Q9NX20 251 aaKnown RBP10.15□□□□□ -0.78
SHMT1P1-201ENST00000419974 H7C1H1 209 aa10.14□□□□□ -0.79
SHMT1P1-201ENST00000419974 M0QY20 66 aa10.14□□□□□ -0.79
SHMT1P1-201ENST00000419974 SPART-AS1P0CW21 52 aa10.14□□□□□ -0.79
SHMT1P1-201ENST00000419974 ESDP10768 282 aa10.14□□□□□ -0.79
SHMT1P1-201ENST00000419974 NRACQ8N912 160 aa10.14□□□□□ -0.79
SHMT1P1-201ENST00000419974 OR4C5Q8NGB2 326 aa10.14□□□□□ -0.79
SHMT1P1-201ENST00000419974 C18orf32Q8TCD1 76 aa10.14□□□□□ -0.79
SHMT1P1-201ENST00000419974 PRELID3AQ96N28 172 aa10.14□□□□□ -0.79
SHMT1P1-201ENST00000419974 HUWE1Q7Z6Z7 4374 aaKnown RBP10.13□□□□□ -0.79
SHMT1P1-201ENST00000419974 A0A087WWL8 130 aa10.13□□□□□ -0.79
SHMT1P1-201ENST00000419974 TRBV10-1A0A0K0K1A3 114 aa10.12□□□□□ -0.79
SHMT1P1-201ENST00000419974 LINC01546A6NGU7 62 aa10.12□□□□□ -0.79
SHMT1P1-201ENST00000419974 K7EMI3 77 aa10.12□□□□□ -0.79
SHMT1P1-201ENST00000419974 TNFRSF6BO95407 300 aa10.12□□□□□ -0.79
SHMT1P1-201ENST00000419974 NHLRC4P0CG21 123 aaPredicted RBP10.12□□□□□ -0.79
SHMT1P1-201ENST00000419974 FAM222AQ5U5X8 452 aa10.12□□□□□ -0.79
SHMT1P1-201ENST00000419974 SUMO4Q6EEV6 95 aa10.12□□□□□ -0.79
SHMT1P1-201ENST00000419974 TRGV2A0A075B6R0 118 aa10.11□□□□□ -0.79
SHMT1P1-201ENST00000419974 TRBV6-4A0A1B0GX49 114 aa10.11□□□□□ -0.79
SHMT1P1-201ENST00000419974 GAGE12BA1L429 117 aa10.11□□□□□ -0.79
SHMT1P1-201ENST00000419974 GAGE7O76087 117 aa10.11□□□□□ -0.79
SHMT1P1-201ENST00000419974 GAGE12FP0CL80 117 aa10.11□□□□□ -0.79
SHMT1P1-201ENST00000419974 GAGE12GP0CL81 117 aa10.11□□□□□ -0.79
SHMT1P1-201ENST00000419974 GAGE12IP0CL82 117 aa10.11□□□□□ -0.79
SHMT1P1-201ENST00000419974 DNAJC30Q96LL9 226 aa10.11□□□□□ -0.79
SHMT1P1-201ENST00000419974 NIT2Q9NQR4 276 aa10.11□□□□□ -0.79
SHMT1P1-201ENST00000419974 C5orf52A6NGY3 159 aa10.1□□□□□ -0.79
SHMT1P1-201ENST00000419974 NPYP01303 97 aa10.1□□□□□ -0.79
SHMT1P1-201ENST00000419974 MGPP08493 103 aa10.1□□□□□ -0.79
SHMT1P1-201ENST00000419974 GATA1P15976 413 aaPredicted RBP10.1□□□□□ -0.79
SHMT1P1-201ENST00000419974 FAM74A4Q5TZK3 123 aa10.1□□□□□ -0.79
SHMT1P1-201ENST00000419974 CHCHD1Q96BP2 118 aaKnown RBP10.1□□□□□ -0.79
SHMT1P1-201ENST00000419974 ZNF479Q96JC4 524 aa10.1□□□□□ -0.79
SHMT1P1-201ENST00000419974 PACRGQ96M98 296 aaPredicted RBP10.1□□□□□ -0.79
SHMT1P1-201ENST00000419974 ZMAT4Q9H898 229 aa10.1□□□□□ -0.79
SHMT1P1-201ENST00000419974 NXT2Q9NPJ8 142 aaKnown RBP10.1□□□□□ -0.79
SHMT1P1-201ENST00000419974 F5H697 171 aa10.09□□□□□ -0.79
SHMT1P1-201ENST00000419974 S100A6P06703 90 aa10.09□□□□□ -0.79
SHMT1P1-201ENST00000419974 POLR2KP53803 58 aaKnown RBP10.09□□□□□ -0.79
SHMT1P1-201ENST00000419974 EMP1P54849 157 aa10.09□□□□□ -0.79
SHMT1P1-201ENST00000419974 ZNF56Q15929 161 aa10.09□□□□□ -0.79
SHMT1P1-201ENST00000419974 MAP1LC3AQ9H492 121 aa10.09□□□□□ -0.79
SHMT1P1-201ENST00000419974 IGLV2-18A0A075B6J9 118 aa10.08□□□□□ -0.8
SHMT1P1-201ENST00000419974 TRAV26-2A0A0B4J265 109 aa10.08□□□□□ -0.8
SHMT1P1-201ENST00000419974 TRBV27A0A0K0K1C4 114 aa10.08□□□□□ -0.8
SHMT1P1-201ENST00000419974 GAS8-AS1O95177 125 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms