RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 BAALC-AS2P0C853 105 aa8.73□□□□□ -1.01
PTCH1-205ENST00000418258 ADCYAP1P18509 176 aa8.72□□□□□ -1.01
PTCH1-205ENST00000418258 IFITM1P13164 125 aa8.72□□□□□ -1.01
PTCH1-205ENST00000418258 IGF2-ASQ6U949 168 aa8.72□□□□□ -1.01
PTCH1-205ENST00000418258 ANKRD29Q8N6D5 301 aa8.72□□□□□ -1.01
PTCH1-205ENST00000418258 IGFL2Q6UWQ7 119 aa8.72□□□□□ -1.01
PTCH1-205ENST00000418258 IGLC2P0DOY2 106 aa8.71□□□□□ -1.01
PTCH1-205ENST00000418258 IGLC3P0DOY3 106 aa8.71□□□□□ -1.01
PTCH1-205ENST00000418258 NDUFA1O15239 70 aa8.71□□□□□ -1.01
PTCH1-205ENST00000418258 ACACBO00763 2458 aa8.71□□□□□ -1.02
PTCH1-205ENST00000418258 C16orf54Q6UWD8 224 aa8.71□□□□□ -1.02
PTCH1-205ENST00000418258 C11orf53Q8IXP5 236 aa8.71□□□□□ -1.02
PTCH1-205ENST00000418258 NCR3O14931 201 aa8.71□□□□□ -1.02
PTCH1-205ENST00000418258 RNF183Q96D59 192 aa8.71□□□□□ -1.02
PTCH1-205ENST00000418258 KLK12Q9UKR0 248 aa8.71□□□□□ -1.02
PTCH1-205ENST00000418258 ALPK3Q96L96 1907 aa8.71□□□□□ -1.02
PTCH1-205ENST00000418258 C9JQL5 133 aa8.71□□□□□ -1.02
PTCH1-205ENST00000418258 MYCNOSP40205 109 aa8.71□□□□□ -1.02
PTCH1-205ENST00000418258 CRYBA4P53673 196 aa8.71□□□□□ -1.02
PTCH1-205ENST00000418258 MRPL52Q86TS9 123 aaKnown RBP8.71□□□□□ -1.02
PTCH1-205ENST00000418258 Q8NFD4 153 aa8.71□□□□□ -1.02
PTCH1-205ENST00000418258 ABCA2Q9BZC7 2435 aa8.7□□□□□ -1.02
PTCH1-205ENST00000418258 H3BMG7 143 aa8.7□□□□□ -1.02
PTCH1-205ENST00000418258 C5orf47Q569G3 176 aa8.7□□□□□ -1.02
PTCH1-205ENST00000418258 SND1-IT1Q9HBX3 110 aa8.7□□□□□ -1.02
PTCH1-205ENST00000418258 Q8N9W7 124 aa8.7□□□□□ -1.02
PTCH1-205ENST00000418258 C1orf147Q96MC9 270 aaPredicted RBP8.7□□□□□ -1.02
PTCH1-205ENST00000418258 PRB2P02812 416 aaPredicted RBP8.7□□□□□ -1.02
PTCH1-205ENST00000418258 POU2AF1Q16633 256 aa8.7□□□□□ -1.02
PTCH1-205ENST00000418258 Q8N1Y9 231 aa8.7□□□□□ -1.02
PTCH1-205ENST00000418258 C11orf45Q8TAV5 145 aa8.7□□□□□ -1.02
PTCH1-205ENST00000418258 IGLV11-55A0A075B6I3 123 aa8.69□□□□□ -1.02
PTCH1-205ENST00000418258 DNAJC9-AS1A6NH13 148 aa8.69□□□□□ -1.02
PTCH1-205ENST00000418258 A0A1W2PPM0 123 aa8.69□□□□□ -1.02
PTCH1-205ENST00000418258 NOTCH2Q04721 2471 aa8.69□□□□□ -1.02
PTCH1-205ENST00000418258 K7EN84 100 aa8.69□□□□□ -1.02
PTCH1-205ENST00000418258 C11orf52Q96A22 123 aa8.69□□□□□ -1.02
PTCH1-205ENST00000418258 VSIG2Q96IQ7 327 aa8.69□□□□□ -1.02
PTCH1-205ENST00000418258 PRSS47A8MTI9 375 aa8.69□□□□□ -1.02
PTCH1-205ENST00000418258 GATA1P15976 413 aaPredicted RBP8.69□□□□□ -1.02
PTCH1-205ENST00000418258 IGHG2P01859 326 aa8.69□□□□□ -1.02
PTCH1-205ENST00000418258 ZFP2Q6ZN57 461 aa8.69□□□□□ -1.02
PTCH1-205ENST00000418258 CUL9Q8IWT3 2517 aa8.69□□□□□ -1.02
PTCH1-205ENST00000418258 RBM3P98179 157 aaKnown RBP8.68□□□□□ -1.02
PTCH1-205ENST00000418258 DAZAP2Q15038 168 aaPredicted RBP8.68□□□□□ -1.02
PTCH1-205ENST00000418258 I3L2K1 104 aa8.68□□□□□ -1.02
PTCH1-205ENST00000418258 K7EIM0 57 aa8.68□□□□□ -1.02
PTCH1-205ENST00000418258 GTSF1Q8WW33 167 aa8.68□□□□□ -1.02
PTCH1-205ENST00000418258 LRCOL1A6NCL2 159 aa8.68□□□□□ -1.02
PTCH1-205ENST00000418258 C14orf132Q9NPU4 83 aa8.68□□□□□ -1.02
PTCH1-205ENST00000418258 IGLL1P15814 213 aa8.68□□□□□ -1.02
PTCH1-205ENST00000418258 INSL3P51460 131 aa8.68□□□□□ -1.02
PTCH1-205ENST00000418258 LTBP2Q14767 1821 aa8.68□□□□□ -1.02
PTCH1-205ENST00000418258 ETDBQ3ZM63 59 aa8.68□□□□□ -1.02
PTCH1-205ENST00000418258 OPRPNQ99935 248 aaPredicted RBP8.67□□□□□ -1.02
PTCH1-205ENST00000418258 COL4A4P53420 1690 aaPredicted RBP8.67□□□□□ -1.02
PTCH1-205ENST00000418258 BAALCQ8WXS3 180 aa8.67□□□□□ -1.02
PTCH1-205ENST00000418258 IGLV3-1P01715 115 aa8.67□□□□□ -1.02
PTCH1-205ENST00000418258 CTSGP08311 255 aa8.67□□□□□ -1.02
PTCH1-205ENST00000418258 C12orf74Q32Q52 190 aa8.67□□□□□ -1.02
PTCH1-205ENST00000418258 DEFB125Q8N687 156 aa8.67□□□□□ -1.02
PTCH1-205ENST00000418258 PRR20EP86478 221 aa8.66□□□□□ -1.02
PTCH1-205ENST00000418258 PRR20CP86479 221 aa8.66□□□□□ -1.02
PTCH1-205ENST00000418258 PRR20DP86480 221 aa8.66□□□□□ -1.02
PTCH1-205ENST00000418258 PRR20BP86481 221 aa8.66□□□□□ -1.02
PTCH1-205ENST00000418258 PRR20AP86496 221 aa8.66□□□□□ -1.02
PTCH1-205ENST00000418258 HIVEP3Q5T1R4 2406 aa8.66□□□□□ -1.02
PTCH1-205ENST00000418258 PROP1O75360 226 aa8.66□□□□□ -1.02
PTCH1-205ENST00000418258 TMEM263Q8WUH6 116 aaKnown RBP8.66□□□□□ -1.02
PTCH1-205ENST00000418258 B9D2Q9BPU9 175 aa8.66□□□□□ -1.02
PTCH1-205ENST00000418258 H0Y9J4 135 aa8.66□□□□□ -1.02
PTCH1-205ENST00000418258 SPAG11BQ08648 103 aa8.66□□□□□ -1.02
PTCH1-205ENST00000418258 NREPQ16612 68 aa8.66□□□□□ -1.02
PTCH1-205ENST00000418258 GPHB5Q86YW7 130 aa8.66□□□□□ -1.02
PTCH1-205ENST00000418258 SPANXDQ9BXN6 97 aa8.66□□□□□ -1.02
PTCH1-205ENST00000418258 CFC1BP0CG36 223 aa8.65□□□□□ -1.02
PTCH1-205ENST00000418258 CFC1P0CG37 223 aa8.65□□□□□ -1.02
PTCH1-205ENST00000418258 C14orf177Q52M58 125 aa8.65□□□□□ -1.02
PTCH1-205ENST00000418258 CCDC168Q8NDH2 2452 aa8.65□□□□□ -1.02
PTCH1-205ENST00000418258 H3BQ85 93 aa8.65□□□□□ -1.02
PTCH1-205ENST00000418258 HIGD2BQ4VC39 106 aa8.65□□□□□ -1.02
PTCH1-205ENST00000418258 DAND5Q8N907 189 aa8.65□□□□□ -1.02
PTCH1-205ENST00000418258 WFDC9Q8NEX5 89 aa8.65□□□□□ -1.02
PTCH1-205ENST00000418258 WFDC11Q8NEX6 87 aa8.65□□□□□ -1.02
PTCH1-205ENST00000418258 C20orf144Q9BQM9 153 aa8.65□□□□□ -1.03
PTCH1-205ENST00000418258 AGRNO00468 2067 aa8.65□□□□□ -1.03
PTCH1-205ENST00000418258 IGKV2-24A0A0C4DH68 120 aa8.64□□□□□ -1.03
PTCH1-205ENST00000418258 K7EP34 96 aa8.64□□□□□ -1.03
PTCH1-205ENST00000418258 TTC28Q96AY4 2481 aa8.64□□□□□ -1.03
PTCH1-205ENST00000418258 MP68P56378 58 aa8.64□□□□□ -1.03
PTCH1-205ENST00000418258 NDUFA11Q86Y39 141 aa8.64□□□□□ -1.03
PTCH1-205ENST00000418258 INAFM1C9JVW0 142 aa8.64□□□□□ -1.03
PTCH1-205ENST00000418258 TMEM258P61165 79 aa8.64□□□□□ -1.03
PTCH1-205ENST00000418258 ANKHD1Q8IWZ3 2542 aaKnown RBP8.64□□□□□ -1.03
PTCH1-205ENST00000418258 K7EP13 123 aa8.64□□□□□ -1.03
PTCH1-205ENST00000418258 SIVA1O15304 175 aa8.64□□□□□ -1.03
PTCH1-205ENST00000418258 PLA2G5P39877 138 aa8.64□□□□□ -1.03
PTCH1-205ENST00000418258 A0A1B0GX51 115 aa8.63□□□□□ -1.03
PTCH1-205ENST00000418258 K7EMT4 169 aa8.63□□□□□ -1.03
PTCH1-205ENST00000418258 RPL39P62891 51 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms