RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 IGLL5B9A064 214 aa8.77□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 HOXA3O43365 443 aaPredicted RBP8.77□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 DUX5Q96PT3 197 aa8.76□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 IGHV4OR15-8A0A075B7B6 117 aa8.76□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 A0A087WW49 117 aa8.76□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 RIPPLY3P57055 190 aa8.76□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 TMEM141Q96I45 108 aa8.76□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 MRPL16Q9NX20 251 aaKnown RBP8.76□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 MAPK1IP1LQ8NDC0 245 aa8.76□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 ITPR1Q14643 2758 aa8.75□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 IGHV1OR15-1A0A075B7D0 117 aa8.75□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 C10orf99Q6UWK7 81 aa8.75□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 SORL1Q92673 2214 aa8.75□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 NXPH4O95158 308 aa8.75□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 RPL39P62891 51 aaKnown RBP8.75□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 CFHR3Q02985 330 aa8.75□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 A0A0J9YX75 114 aa8.75□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 ZNF876PQ49A33 203 aa8.75□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 FOXI2Q6ZQN5 318 aa8.75□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 Q8N1Y9 231 aa8.75□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 MDFICQ9P1T7 246 aa8.75□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 LGALS1P09382 135 aaKnown RBP8.74□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 KHDC1LQ5JSQ8 128 aa8.74□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 RPL32P62910 135 aaKnown RBP8.74□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 KIF25-AS1Q9Y6Z4 181 aa8.74□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 CELSR1Q9NYQ6 3014 aa8.74□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 TMEM89A2RUT3 159 aa8.74□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 H3BMG7 143 aa8.74□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 POLR2KP53803 58 aaKnown RBP8.74□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 ODF3Q96PU9 254 aa8.74□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 AGRNO00468 2067 aa8.73□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 TRGV11A0A075B6L2 103 aa8.73□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 IGHV3-16A0A0C4DH30 117 aa8.73□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 C11orf86A6NJI1 115 aa8.73□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 G3V4G9 280 aa8.73□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 J3QLI3 93 aa8.73□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 RRN3P1Q2M238 152 aa8.73□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 TRPT1Q86TN4 253 aaKnown RBP8.73□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 KLHL30-AS1Q8NEE0 82 aa8.73□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 LOC107984156A0A0G2JMH3 177 aa8.73□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 F8W1H4 67 aa8.73□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 LGALS3P17931 250 aaKnown RBP8.73□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 ARL17AQ8IVW1 177 aa8.73□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 PHLDA1Q8WV24 401 aaPredicted RBP8.73□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 TIMM17AQ99595 171 aa8.73□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 PGPEP1Q9NXJ5 209 aa8.73□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 K7EQG2 157 aa8.72□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 APOMO95445 188 aa8.72□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 COX6B1P14854 86 aa8.72□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 ZNF580Q9UK33 172 aa8.72□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 VPREB3Q9UKI3 123 aa8.72□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 TRBV7-3A0A075B6L6 115 aa8.72□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 ELANEP08246 267 aa8.72□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 HOXD3P31249 432 aaPredicted RBP8.72□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 LINC00315P59091 139 aa8.72□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 GAGE13Q4V321 117 aa8.72□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 AMTNQ6UX39 209 aa8.72□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 USP9XQ93008 2570 aaPredicted RBP8.72□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 RNF223E7ERA6 249 aa8.71□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 LINC01619G3V211 115 aa8.71□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 LGALS9O00182 355 aa8.71□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 LYRM7Q5U5X0 104 aa8.71□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 TRBV27A0A0K0K1C4 114 aa8.71□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 TEX48A0A1B0GUV7 120 aa8.71□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 POM121L12Q8N7R1 296 aa8.71□□□□□ -1.01
CSPG4P3Y-201ENST00000418188 IGIPA6NJ69 53 aa8.71□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 TCTEX1D4Q5JR98 221 aa8.71□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 C9orf85Q96MD7 179 aa8.7□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 VCX2Q9H322 139 aa8.7□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 POLQO75417 2590 aa8.7□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 SFTA2Q6UW10 78 aa8.7□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 BEX4Q9NWD9 120 aaPredicted RBP8.7□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 FLNCQ14315 2725 aa8.7□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 TRBV6-5A0A0K0K1A5 114 aa8.7□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 RHOHQ15669 191 aa8.7□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 UBE2E2Q96LR5 201 aa8.7□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 MUC4Q99102 2169 aa8.7□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 I3L3M4 83 aa8.69□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 M0QY20 66 aa8.69□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 CRYGDP07320 174 aa8.69□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 DEFB131AP59861 70 aa8.69□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 WFDC2Q14508 124 aa8.69□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 ETDBQ3ZM63 59 aa8.69□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 MTURNQ8N3F0 131 aa8.69□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 PLEKHB2Q96CS7 222 aa8.69□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 IGHV3-73A0A0B4J1V6 119 aa8.69□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 A0A1B0GWB2 263 aa8.69□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 DUX3Q96PT4 197 aa8.69□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 TSHBP01222 138 aa8.68□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 SCGB1C2P0DMR2 95 aa8.68□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 DYNLRB2Q8TF09 96 aa8.68□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 TNFRSF18Q9Y5U5 241 aa8.68□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 CFAP46Q8IYW2 2715 aa8.68□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 NAV2Q8IVL1 2488 aa8.68□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 KNCNA6PVL3 124 aa8.68□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 J3QQQ9 107 aa8.68□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 CENPEQ02224 2701 aa8.68□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 MYO9AB2RTY4 2548 aa8.68□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 LRRK2Q5S007 2527 aa8.68□□□□□ -1.02
CSPG4P3Y-201ENST00000418188 IGLV4-69A0A075B6H9 119 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms