RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 GNG4P50150 75 aa10.4□□□□□ -0.74
NUP50-204ENST00000417702 OR10J3Q5JRS4 329 aa10.4□□□□□ -0.74
NUP50-204ENST00000417702 Q6ZRN7 208 aaPredicted RBP10.4□□□□□ -0.74
NUP50-204ENST00000417702 Q6ZSN1 163 aa10.4□□□□□ -0.74
NUP50-204ENST00000417702 ZFP82Q8N141 532 aa10.4□□□□□ -0.74
NUP50-204ENST00000417702 EIF5A2Q9GZV4 153 aaKnown RBP10.4□□□□□ -0.74
NUP50-204ENST00000417702 GTSF1LQ9H1H1 148 aa10.4□□□□□ -0.74
NUP50-204ENST00000417702 JPT2Q9H910 190 aa10.4□□□□□ -0.74
NUP50-204ENST00000417702 SCRT2Q9NQ03 307 aa10.4□□□□□ -0.74
NUP50-204ENST00000417702 TNFRSF18Q9Y5U5 241 aa10.4□□□□□ -0.74
NUP50-204ENST00000417702 DYNC1H1Q14204 4646 aaKnown RBP10.39□□□□□ -0.75
NUP50-204ENST00000417702 TMEM250H0YL14 139 aa10.39□□□□□ -0.75
NUP50-204ENST00000417702 M0R381 172 aa10.39□□□□□ -0.75
NUP50-204ENST00000417702 TOR2AQ5JU69 321 aa10.39□□□□□ -0.75
NUP50-204ENST00000417702 LELP1Q5T871 98 aa10.39□□□□□ -0.75
NUP50-204ENST00000417702 FAM74A4Q5TZK3 123 aa10.39□□□□□ -0.75
NUP50-204ENST00000417702 PRR27Q6MZM9 219 aa10.39□□□□□ -0.75
NUP50-204ENST00000417702 FAM210AQ96ND0 272 aa10.39□□□□□ -0.75
NUP50-204ENST00000417702 SAMD10Q9BYL1 202 aa10.39□□□□□ -0.75
NUP50-204ENST00000417702 GAGE12JA6NER3 117 aa10.38□□□□□ -0.75
NUP50-204ENST00000417702 NDUFS6O75380 124 aaKnown RBP10.38□□□□□ -0.75
NUP50-204ENST00000417702 ERVFC1-1P60608 527 aa10.38□□□□□ -0.75
NUP50-204ENST00000417702 GAGE1Q13065 139 aa10.38□□□□□ -0.75
NUP50-204ENST00000417702 GAGE4Q13068 117 aa10.38□□□□□ -0.75
NUP50-204ENST00000417702 GAGE5Q13069 117 aa10.38□□□□□ -0.75
NUP50-204ENST00000417702 GAGE13Q4V321 117 aa10.38□□□□□ -0.75
NUP50-204ENST00000417702 LINC01556Q5JQF7 62 aa10.38□□□□□ -0.75
NUP50-204ENST00000417702 UFSP1Q6NVU6 142 aa10.38□□□□□ -0.75
NUP50-204ENST00000417702 SFRP2Q96HF1 295 aa10.38□□□□□ -0.75
NUP50-204ENST00000417702 BIN3Q9NQY0 253 aa10.38□□□□□ -0.75
NUP50-204ENST00000417702 PKD1P98161 4303 aa10.38□□□□□ -0.75
NUP50-204ENST00000417702 A0A087WWL8 130 aa10.37□□□□□ -0.75
NUP50-204ENST00000417702 IGLV2-8P01709 118 aa10.37□□□□□ -0.75
NUP50-204ENST00000417702 CXCL1P09341 107 aa10.37□□□□□ -0.75
NUP50-204ENST00000417702 DAZAP1Q96EP5 407 aaKnown RBP10.37□□□□□ -0.75
NUP50-204ENST00000417702 KRTAP10-2P60368 255 aa10.36□□□□□ -0.75
NUP50-204ENST00000417702 RPL19P84098 196 aaKnown RBP10.36□□□□□ -0.75
NUP50-204ENST00000417702 C14orf178Q8N769 122 aaPredicted RBP10.36□□□□□ -0.75
NUP50-204ENST00000417702 KRTAP17-1Q9BYP8 105 aa10.36□□□□□ -0.75
NUP50-204ENST00000417702 TRBV20OR9-2A0A075B6H5 130 aa10.35□□□□□ -0.75
NUP50-204ENST00000417702 CEBPGP53567 150 aa10.35□□□□□ -0.75
NUP50-204ENST00000417702 A0A087WWC5 75 aa10.34□□□□□ -0.75
NUP50-204ENST00000417702 IGHV3-30P01768 117 aa10.34□□□□□ -0.75
NUP50-204ENST00000417702 IGHV3-33P01772 117 aa10.34□□□□□ -0.75
NUP50-204ENST00000417702 LINC00694P0DN24 101 aa10.34□□□□□ -0.75
NUP50-204ENST00000417702 IGHV3-30-3P0DP02 117 aa10.34□□□□□ -0.75
NUP50-204ENST00000417702 IGHV3-30-5P0DP03 117 aa10.34□□□□□ -0.75
NUP50-204ENST00000417702 RAB14P61106 215 aa10.34□□□□□ -0.75
NUP50-204ENST00000417702 PGPEP1Q9NXJ5 209 aa10.34□□□□□ -0.75
NUP50-204ENST00000417702 IBA57-AS1B1ANH7 110 aa10.33□□□□□ -0.76
NUP50-204ENST00000417702 CDK2AP2O75956 126 aa10.33□□□□□ -0.76
NUP50-204ENST00000417702 PEA15Q15121 130 aa10.33□□□□□ -0.76
NUP50-204ENST00000417702 SPANXN1Q5VSR9 72 aa10.33□□□□□ -0.76
NUP50-204ENST00000417702 OR10AG1Q8NH19 301 aa10.33□□□□□ -0.76
NUP50-204ENST00000417702 Q9UF83 564 aa10.33□□□□□ -0.76
NUP50-204ENST00000417702 A0A087WTM6 91 aa10.32□□□□□ -0.76
NUP50-204ENST00000417702 TRBV10-1A0A0K0K1A3 114 aa10.32□□□□□ -0.76
NUP50-204ENST00000417702 C19orf71A6NCJ1 209 aa10.32□□□□□ -0.76
NUP50-204ENST00000417702 SNAI2O43623 268 aa10.32□□□□□ -0.76
NUP50-204ENST00000417702 PSCAO43653 123 aa10.32□□□□□ -0.76
NUP50-204ENST00000417702 P01737 135 aa10.32□□□□□ -0.76
NUP50-204ENST00000417702 SRP19P09132 144 aaKnown RBP10.32□□□□□ -0.76
NUP50-204ENST00000417702 OR5AL1P0C617 328 aa10.32□□□□□ -0.76
NUP50-204ENST00000417702 RPS20P60866 119 aaKnown RBP10.32□□□□□ -0.76
NUP50-204ENST00000417702 OR2D3Q8NGH3 330 aa10.32□□□□□ -0.76
NUP50-204ENST00000417702 OCC1Q8TAD7 63 aa10.32□□□□□ -0.76
NUP50-204ENST00000417702 SSBP4Q9BWG4 385 aaPredicted RBP10.32□□□□□ -0.76
NUP50-204ENST00000417702 SMDT1Q9H4I9 107 aa10.32□□□□□ -0.76
NUP50-204ENST00000417702 XKRY2A2RUG3 117 aa10.31□□□□□ -0.76
NUP50-204ENST00000417702 RPL36AP83881 106 aaKnown RBP10.31□□□□□ -0.76
NUP50-204ENST00000417702 CDPF1Q6NVV7 123 aa10.31□□□□□ -0.76
NUP50-204ENST00000417702 RPL36ALQ969Q0 106 aaKnown RBP10.31□□□□□ -0.76
NUP50-204ENST00000417702 SMIM7Q9BQ49 75 aa10.31□□□□□ -0.76
NUP50-204ENST00000417702 Q9HAA7 133 aa10.31□□□□□ -0.76
NUP50-204ENST00000417702 MUC21A0A0G2JKD1 596 aa10.3□□□□□ -0.76
NUP50-204ENST00000417702 MUC21A0A140T8X8 626 aa10.3□□□□□ -0.76
NUP50-204ENST00000417702 ZNF727A8MUV8 499 aa10.3□□□□□ -0.76
NUP50-204ENST00000417702 RAB4BP61018 213 aa10.3□□□□□ -0.76
NUP50-204ENST00000417702 ZNF56Q15929 161 aa10.3□□□□□ -0.76
NUP50-204ENST00000417702 K7EN84 100 aa10.29□□□□□ -0.76
NUP50-204ENST00000417702 SSTP61278 116 aa10.29□□□□□ -0.76
NUP50-204ENST00000417702 LAGE3Q14657 143 aa10.29□□□□□ -0.76
NUP50-204ENST00000417702 FAM74A3Q4VXF1 159 aa10.29□□□□□ -0.76
NUP50-204ENST00000417702 NUDT10Q8NFP7 164 aa10.29□□□□□ -0.76
NUP50-204ENST00000417702 NUDT11Q96G61 164 aa10.29□□□□□ -0.76
NUP50-204ENST00000417702 TRBV7-3A0A075B6L6 115 aa10.28□□□□□ -0.76
NUP50-204ENST00000417702 F5H697 171 aa10.28□□□□□ -0.76
NUP50-204ENST00000417702 SMIM17P0DL12 118 aa10.28□□□□□ -0.76
NUP50-204ENST00000417702 TPPP3Q9BW30 176 aa10.28□□□□□ -0.76
NUP50-204ENST00000417702 RNASE7Q9H1E1 156 aaKnown RBP10.28□□□□□ -0.76
NUP50-204ENST00000417702 URGCP-MRPS24S4R325 110 aa10.28□□□□□ -0.76
NUP50-204ENST00000417702 UBE2D3P61077 147 aa10.27□□□□□ -0.77
NUP50-204ENST00000417702 UBE2D2P62837 147 aa10.27□□□□□ -0.77
NUP50-204ENST00000417702 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.27□□□□□ -0.77
NUP50-204ENST00000417702 FER1L6-AS1Q8NA97 138 aa10.27□□□□□ -0.77
NUP50-204ENST00000417702 OR10G8Q8NGN5 311 aa10.27□□□□□ -0.77
NUP50-204ENST00000417702 AP1S3Q96PC3 154 aa10.27□□□□□ -0.77
NUP50-204ENST00000417702 TM2D2Q9BX73 214 aa10.27□□□□□ -0.77
NUP50-204ENST00000417702 RPP21Q9H633 154 aaKnown RBP10.27□□□□□ -0.77
NUP50-204ENST00000417702 RYR1P21817 5038 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms