RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 SPATA12Q7Z6I5 190 aa12.29□□□□□ -0.44
SSBP3-205ENST00000417664 RASL10AQ92737 203 aa12.29□□□□□ -0.44
SSBP3-205ENST00000417664 LINC01587Q99440 93 aa12.29□□□□□ -0.44
SSBP3-205ENST00000417664 C19orf73Q9NVV2 129 aa12.29□□□□□ -0.44
SSBP3-205ENST00000417664 FLNBO75369 2602 aaKnown RBP12.28□□□□□ -0.44
SSBP3-205ENST00000417664 FCER1GP30273 86 aa12.28□□□□□ -0.44
SSBP3-205ENST00000417664 SUMO2P61956 95 aaKnown RBP12.28□□□□□ -0.44
SSBP3-205ENST00000417664 RPL32P62910 135 aaKnown RBP12.28□□□□□ -0.44
SSBP3-205ENST00000417664 ZNF876PQ49A33 203 aa12.28□□□□□ -0.44
SSBP3-205ENST00000417664 SPXQ9BT56 116 aa12.28□□□□□ -0.44
SSBP3-205ENST00000417664 VAMP8Q9BV40 100 aa12.28□□□□□ -0.44
SSBP3-205ENST00000417664 SMIM2Q9BVW6 85 aa12.28□□□□□ -0.44
SSBP3-205ENST00000417664 M0R2P5 195 aa12.27□□□□□ -0.45
SSBP3-205ENST00000417664 C9orf66Q5T8R8 295 aa12.27□□□□□ -0.45
SSBP3-205ENST00000417664 NDUFAF3Q9BU61 184 aa12.27□□□□□ -0.45
SSBP3-205ENST00000417664 KIR2DL5BA0A0G2JN68 375 aa12.26□□□□□ -0.45
SSBP3-205ENST00000417664 KIR2DL5BA0A0G2JPC4 375 aa12.26□□□□□ -0.45
SSBP3-205ENST00000417664 KIR2DL5AQ8N109 375 aa12.26□□□□□ -0.45
SSBP3-205ENST00000417664 C1QTNF4Q9BXJ3 329 aa12.26□□□□□ -0.45
SSBP3-205ENST00000417664 XCL2Q9UBD3 114 aa12.26□□□□□ -0.45
SSBP3-205ENST00000417664 CRYGDP07320 174 aa12.26□□□□□ -0.45
SSBP3-205ENST00000417664 HTN1P15515 57 aa12.26□□□□□ -0.45
SSBP3-205ENST00000417664 LAGE3Q14657 143 aa12.26□□□□□ -0.45
SSBP3-205ENST00000417664 MORN3Q6PF18 240 aaPredicted RBP12.26□□□□□ -0.45
SSBP3-205ENST00000417664 LINC00173Q6ZV60 143 aa12.26□□□□□ -0.45
SSBP3-205ENST00000417664 F8P00451 2351 aa12.26□□□□□ -0.45
SSBP3-205ENST00000417664 A8MWV9 139 aa12.25□□□□□ -0.45
SSBP3-205ENST00000417664 TMEM208Q9BTX3 173 aa12.25□□□□□ -0.45
SSBP3-205ENST00000417664 JPT2Q9H910 190 aa12.25□□□□□ -0.45
SSBP3-205ENST00000417664 A0A087WWL8 130 aa12.24□□□□□ -0.45
SSBP3-205ENST00000417664 ORMDL2Q53FV1 153 aa12.24□□□□□ -0.45
SSBP3-205ENST00000417664 SUMO4Q6EEV6 95 aa12.24□□□□□ -0.45
SSBP3-205ENST00000417664 C11orf72Q8NBR9 251 aa12.24□□□□□ -0.45
SSBP3-205ENST00000417664 MCRIP2Q9BUT9 160 aaKnown RBP12.24□□□□□ -0.45
SSBP3-205ENST00000417664 PRO1933Q9H354 126 aa12.24□□□□□ -0.45
SSBP3-205ENST00000417664 TRBV6-5A0A0K0K1A5 114 aa12.23□□□□□ -0.45
SSBP3-205ENST00000417664 F5H697 171 aa12.23□□□□□ -0.45
SSBP3-205ENST00000417664 C1orf158Q8N1D5 194 aa12.23□□□□□ -0.45
SSBP3-205ENST00000417664 EDA2RQ9HAV5 297 aa12.23□□□□□ -0.45
SSBP3-205ENST00000417664 DDTP30046 118 aa12.22□□□□□ -0.45
SSBP3-205ENST00000417664 LINC01545Q5VT33 79 aa12.22□□□□□ -0.45
SSBP3-205ENST00000417664 IFI27L1Q96BM0 104 aa12.22□□□□□ -0.45
SSBP3-205ENST00000417664 RPL39LQ96EH5 51 aaKnown RBP12.22□□□□□ -0.45
SSBP3-205ENST00000417664 ST20Q9HBF5 79 aa12.22□□□□□ -0.45
SSBP3-205ENST00000417664 GOLT1BQ9Y3E0 138 aa12.22□□□□□ -0.45
SSBP3-205ENST00000417664 LINC00587B1AMM8 73 aa12.22□□□□□ -0.45
SSBP3-205ENST00000417664 G0S2P27469 103 aa12.22□□□□□ -0.45
SSBP3-205ENST00000417664 FAM74A4Q5TZK3 123 aa12.22□□□□□ -0.45
SSBP3-205ENST00000417664 GTSCR1Q86UQ5 136 aa12.22□□□□□ -0.45
SSBP3-205ENST00000417664 PAM16Q9Y3D7 125 aa12.22□□□□□ -0.45
SSBP3-205ENST00000417664 TRAV9-2A0A087WT02 112 aa12.21□□□□□ -0.45
SSBP3-205ENST00000417664 LINC01549A6NIU2 74 aa12.21□□□□□ -0.45
SSBP3-205ENST00000417664 H7C1H1 209 aa12.21□□□□□ -0.45
SSBP3-205ENST00000417664 ZNF56Q15929 161 aa12.21□□□□□ -0.45
SSBP3-205ENST00000417664 TMEM158Q8WZ71 300 aa12.21□□□□□ -0.45
SSBP3-205ENST00000417664 M0QY20 66 aa12.2□□□□□ -0.46
SSBP3-205ENST00000417664 RHODO00212 210 aa12.2□□□□□ -0.46
SSBP3-205ENST00000417664 ATP5LO75964 103 aa12.2□□□□□ -0.46
SSBP3-205ENST00000417664 POLR2KP53803 58 aaKnown RBP12.2□□□□□ -0.46
SSBP3-205ENST00000417664 LGALS9BQ3B8N2 356 aa12.2□□□□□ -0.46
SSBP3-205ENST00000417664 LGALS9CQ6DKI2 356 aa12.2□□□□□ -0.46
SSBP3-205ENST00000417664 VCYO14598 125 aa12.19□□□□□ -0.46
SSBP3-205ENST00000417664 GIG44P09565 113 aaPredicted RBP12.19□□□□□ -0.46
SSBP3-205ENST00000417664 ZNF705AQ6ZN79 300 aaPredicted RBP12.19□□□□□ -0.46
SSBP3-205ENST00000417664 WFDC9Q8NEX5 89 aa12.19□□□□□ -0.46
SSBP3-205ENST00000417664 TMEM263Q8WUH6 116 aaKnown RBP12.19□□□□□ -0.46
SSBP3-205ENST00000417664 CSTL1Q9H114 145 aa12.19□□□□□ -0.46
SSBP3-205ENST00000417664 TCAPO15273 167 aa12.19□□□□□ -0.46
SSBP3-205ENST00000417664 NUDT3O95989 172 aa12.19□□□□□ -0.46
SSBP3-205ENST00000417664 SPATA45Q537H7 98 aa12.19□□□□□ -0.46
SSBP3-205ENST00000417664 IL17DQ8TAD2 202 aa12.19□□□□□ -0.46
SSBP3-205ENST00000417664 RNASE8Q8TDE3 154 aaKnown RBP12.19□□□□□ -0.46
SSBP3-205ENST00000417664 TRBV27A0A0K0K1C4 114 aa12.18□□□□□ -0.46
SSBP3-205ENST00000417664 KIR2DL4Q99706 377 aa12.18□□□□□ -0.46
SSBP3-205ENST00000417664 WFDC10AQ9H1F0 79 aa12.18□□□□□ -0.46
SSBP3-205ENST00000417664 UFSP1Q6NVU6 142 aa12.17□□□□□ -0.46
SSBP3-205ENST00000417664 IGHV3OR16-12A0A075B7B8 117 aa12.16□□□□□ -0.46
SSBP3-205ENST00000417664 SDHAF1A6NFY7 115 aa12.16□□□□□ -0.46
SSBP3-205ENST00000417664 HSBP1L1C9JCN9 74 aa12.16□□□□□ -0.46
SSBP3-205ENST00000417664 RPL35AP18077 110 aaKnown RBP12.16□□□□□ -0.46
SSBP3-205ENST00000417664 ATOH7Q8N100 152 aa12.16□□□□□ -0.46
SSBP3-205ENST00000417664 CSNK1G2-AS1Q8NCQ2 148 aa12.16□□□□□ -0.46
SSBP3-205ENST00000417664 MIEN1Q9BRT3 115 aa12.16□□□□□ -0.46
SSBP3-205ENST00000417664 H0Y8G0 127 aa12.16□□□□□ -0.46
SSBP3-205ENST00000417664 WIPF1O43516 503 aa12.16□□□□□ -0.46
SSBP3-205ENST00000417664 PRM2P04554 102 aa12.16□□□□□ -0.46
SSBP3-205ENST00000417664 AZU1P20160 251 aa12.16□□□□□ -0.46
SSBP3-205ENST00000417664 DEFA6Q01524 100 aa12.16□□□□□ -0.46
SSBP3-205ENST00000417664 CFAP126Q5VTH2 177 aa12.16□□□□□ -0.46
SSBP3-205ENST00000417664 ZFP2Q6ZN57 461 aa12.16□□□□□ -0.46
SSBP3-205ENST00000417664 TOMM6Q96B49 74 aa12.16□□□□□ -0.46
SSBP3-205ENST00000417664 C16orf74Q96GX8 76 aa12.16□□□□□ -0.46
SSBP3-205ENST00000417664 RS1O15537 224 aa12.15□□□□□ -0.46
SSBP3-205ENST00000417664 DAZ2Q13117 558 aaKnown RBP12.15□□□□□ -0.46
SSBP3-205ENST00000417664 C18orf15Q96N68 181 aa12.14□□□□□ -0.47
SSBP3-205ENST00000417664 JMJD1CQ15652 2540 aa12.13□□□□□ -0.47
SSBP3-205ENST00000417664 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.13□□□□□ -0.47
SSBP3-205ENST00000417664 PRSS1P07477 247 aa12.13□□□□□ -0.47
SSBP3-205ENST00000417664 IGLL1P15814 213 aa12.13□□□□□ -0.47
SSBP3-205ENST00000417664 RRN3P1Q2M238 152 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms