RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 H3BUA1 57 aa10.82□□□□□ -0.68
HDAC9-208ENST00000417496 SLC25A16P16260 332 aa10.82□□□□□ -0.68
HDAC9-208ENST00000417496 FAM208BQ5VWN6 2430 aa10.82□□□□□ -0.68
HDAC9-208ENST00000417496 MAPK1IP1LQ8NDC0 245 aa10.82□□□□□ -0.68
HDAC9-208ENST00000417496 CFHR3Q02985 330 aa10.81□□□□□ -0.68
HDAC9-208ENST00000417496 SFTA2Q6UW10 78 aa10.81□□□□□ -0.68
HDAC9-208ENST00000417496 DUX5Q96PT3 197 aa10.81□□□□□ -0.68
HDAC9-208ENST00000417496 ZNF815PA8K554 130 aa10.81□□□□□ -0.68
HDAC9-208ENST00000417496 SCGB2A2Q13296 93 aa10.81□□□□□ -0.68
HDAC9-208ENST00000417496 FOXI2Q6ZQN5 318 aa10.81□□□□□ -0.68
HDAC9-208ENST00000417496 FBN2P35556 2912 aa10.8□□□□□ -0.68
HDAC9-208ENST00000417496 C11orf86A6NJI1 115 aa10.8□□□□□ -0.68
HDAC9-208ENST00000417496 MED14OSP0DP75 135 aa10.8□□□□□ -0.68
HDAC9-208ENST00000417496 ZFP2Q6ZN57 461 aa10.8□□□□□ -0.68
HDAC9-208ENST00000417496 SCGB1D4Q6XE38 83 aa10.8□□□□□ -0.68
HDAC9-208ENST00000417496 ZNF256Q9Y2P7 627 aaPredicted RBP10.8□□□□□ -0.68
HDAC9-208ENST00000417496 BRI3O95415 125 aa10.79□□□□□ -0.68
HDAC9-208ENST00000417496 TAL2Q16559 108 aa10.79□□□□□ -0.68
HDAC9-208ENST00000417496 IGLV4-69A0A075B6H9 119 aa10.79□□□□□ -0.68
HDAC9-208ENST00000417496 SDHAF1A6NFY7 115 aa10.79□□□□□ -0.68
HDAC9-208ENST00000417496 NXPH4O95158 308 aa10.79□□□□□ -0.68
HDAC9-208ENST00000417496 PSMB8P28062 276 aa10.79□□□□□ -0.68
HDAC9-208ENST00000417496 POLR2KP53803 58 aaKnown RBP10.79□□□□□ -0.68
HDAC9-208ENST00000417496 DEFB112Q30KQ8 113 aa10.79□□□□□ -0.68
HDAC9-208ENST00000417496 SH2D6Q7Z4S9 175 aa10.79□□□□□ -0.68
HDAC9-208ENST00000417496 OPRPNQ99935 248 aaPredicted RBP10.79□□□□□ -0.68
HDAC9-208ENST00000417496 IGIPA6NJ69 53 aa10.78□□□□□ -0.68
HDAC9-208ENST00000417496 ID1P41134 155 aa10.78□□□□□ -0.68
HDAC9-208ENST00000417496 IGHV4OR15-8A0A075B7B6 117 aa10.78□□□□□ -0.68
HDAC9-208ENST00000417496 A0A087WW49 117 aa10.78□□□□□ -0.68
HDAC9-208ENST00000417496 SPINK13Q1W4C9 94 aa10.78□□□□□ -0.68
HDAC9-208ENST00000417496 NDUFS8O00217 210 aa10.77□□□□□ -0.69
HDAC9-208ENST00000417496 Q8N1Y9 231 aa10.77□□□□□ -0.69
HDAC9-208ENST00000417496 POM121L12Q8N7R1 296 aa10.77□□□□□ -0.69
HDAC9-208ENST00000417496 LRRK2Q5S007 2527 aa10.77□□□□□ -0.69
HDAC9-208ENST00000417496 TRBV7-9A0A0J9YWB2 115 aa10.77□□□□□ -0.69
HDAC9-208ENST00000417496 PPP1R17O96001 155 aa10.77□□□□□ -0.69
HDAC9-208ENST00000417496 COX6B1P14854 86 aa10.77□□□□□ -0.69
HDAC9-208ENST00000417496 SYNJ2BPP57105 145 aa10.77□□□□□ -0.69
HDAC9-208ENST00000417496 SRSF9Q13242 221 aaKnown RBP eCLIP10.77□□□□□ -0.69
HDAC9-208ENST00000417496 RRN3P1Q2M238 152 aa10.77□□□□□ -0.69
HDAC9-208ENST00000417496 MORN3Q6PF18 240 aaPredicted RBP10.77□□□□□ -0.69
HDAC9-208ENST00000417496 MYO9AB2RTY4 2548 aa10.76□□□□□ -0.69
HDAC9-208ENST00000417496 ANKRD17O75179 2603 aaKnown RBP10.76□□□□□ -0.69
HDAC9-208ENST00000417496 B4DSR2 109 aa10.76□□□□□ -0.69
HDAC9-208ENST00000417496 ETDBQ3ZM63 59 aa10.76□□□□□ -0.69
HDAC9-208ENST00000417496 KIR2DL4Q99706 377 aa10.76□□□□□ -0.69
HDAC9-208ENST00000417496 K7EMT4 169 aa10.76□□□□□ -0.69
HDAC9-208ENST00000417496 VCYO14598 125 aa10.76□□□□□ -0.69
HDAC9-208ENST00000417496 HOXA3O43365 443 aaPredicted RBP10.76□□□□□ -0.69
HDAC9-208ENST00000417496 HTN1P15515 57 aa10.76□□□□□ -0.69
HDAC9-208ENST00000417496 ZNF56Q15929 161 aa10.76□□□□□ -0.69
HDAC9-208ENST00000417496 PGPEP1Q9NXJ5 209 aa10.76□□□□□ -0.69
HDAC9-208ENST00000417496 PTPN13Q12923 2485 aa10.75□□□□□ -0.69
HDAC9-208ENST00000417496 IGHV3-16A0A0C4DH30 117 aa10.75□□□□□ -0.69
HDAC9-208ENST00000417496 TMEM170BQ5T4T1 132 aa10.75□□□□□ -0.69
HDAC9-208ENST00000417496 ZNRF2Q8NHG8 242 aa10.75□□□□□ -0.69
HDAC9-208ENST00000417496 ABCA12Q86UK0 2595 aa10.75□□□□□ -0.69
HDAC9-208ENST00000417496 PRM2P04554 102 aa10.75□□□□□ -0.69
HDAC9-208ENST00000417496 TSPEAR-AS2P59090 65 aa10.75□□□□□ -0.69
HDAC9-208ENST00000417496 A0A0J9YX75 114 aa10.74□□□□□ -0.69
HDAC9-208ENST00000417496 PMVKQ15126 192 aa10.74□□□□□ -0.69
HDAC9-208ENST00000417496 MRPL16Q9NX20 251 aaKnown RBP10.74□□□□□ -0.69
HDAC9-208ENST00000417496 A0A1B0GWB2 263 aa10.74□□□□□ -0.69
HDAC9-208ENST00000417496 LINC01549A6NIU2 74 aa10.74□□□□□ -0.69
HDAC9-208ENST00000417496 SPANXB1Q9NS25 103 aaPredicted RBP10.74□□□□□ -0.69
HDAC9-208ENST00000417496 TLN2Q9Y4G6 2542 aa10.73□□□□□ -0.69
HDAC9-208ENST00000417496 APOMO95445 188 aa10.73□□□□□ -0.69
HDAC9-208ENST00000417496 TEX15Q9BXT5 2789 aa10.73□□□□□ -0.69
HDAC9-208ENST00000417496 F8W1H4 67 aa10.73□□□□□ -0.69
HDAC9-208ENST00000417496 M0QY20 66 aa10.73□□□□□ -0.69
HDAC9-208ENST00000417496 INSL3P51460 131 aa10.73□□□□□ -0.69
HDAC9-208ENST00000417496 SNRPD3P62318 126 aaKnown RBP10.73□□□□□ -0.69
HDAC9-208ENST00000417496 IGHV3-73A0A0B4J1V6 119 aa10.72□□□□□ -0.69
HDAC9-208ENST00000417496 TRBV27A0A0K0K1C4 114 aa10.72□□□□□ -0.69
HDAC9-208ENST00000417496 GAGE13Q4V321 117 aa10.72□□□□□ -0.69
HDAC9-208ENST00000417496 HIST2H2BDQ6DRA6 164 aa10.72□□□□□ -0.69
HDAC9-208ENST00000417496 C9orf85Q96MD7 179 aa10.72□□□□□ -0.69
HDAC9-208ENST00000417496 IGHV3-64A0A075B6Q5 118 aa10.72□□□□□ -0.69
HDAC9-208ENST00000417496 ZNF876PQ49A33 203 aa10.72□□□□□ -0.69
HDAC9-208ENST00000417496 A0A0J9YY99 117 aa10.71□□□□□ -0.69
HDAC9-208ENST00000417496 LINC01619G3V211 115 aa10.71□□□□□ -0.69
HDAC9-208ENST00000417496 K7EQG2 157 aa10.71□□□□□ -0.69
HDAC9-208ENST00000417496 LGALS9O00182 355 aa10.71□□□□□ -0.69
HDAC9-208ENST00000417496 TGFAP01135 160 aa10.71□□□□□ -0.69
HDAC9-208ENST00000417496 LOC107984156A0A0G2JMH3 177 aa10.71□□□□□ -0.7
HDAC9-208ENST00000417496 P0DMU3 169 aa10.71□□□□□ -0.7
HDAC9-208ENST00000417496 FAM231AP0DMU4 169 aa10.71□□□□□ -0.7
HDAC9-208ENST00000417496 FAM231CP0DMU5 169 aa10.71□□□□□ -0.7
HDAC9-208ENST00000417496 ARL17AQ8IVW1 177 aa10.71□□□□□ -0.7
HDAC9-208ENST00000417496 PRO0461Q9UI25 63 aa10.71□□□□□ -0.7
HDAC9-208ENST00000417496 ZNF462Q96JM2 2506 aa10.7□□□□□ -0.7
HDAC9-208ENST00000417496 IGHV1OR15-1A0A075B7D0 117 aa10.7□□□□□ -0.7
HDAC9-208ENST00000417496 DEFB136Q30KP8 78 aa10.7□□□□□ -0.7
HDAC9-208ENST00000417496 GTSF1LQ9H1H1 148 aa10.7□□□□□ -0.7
HDAC9-208ENST00000417496 PROK1P58294 105 aa10.69□□□□□ -0.7
HDAC9-208ENST00000417496 RPL32P62910 135 aaKnown RBP10.69□□□□□ -0.7
HDAC9-208ENST00000417496 C18orf65Q6ZTR6 163 aa10.69□□□□□ -0.7
HDAC9-208ENST00000417496 SPAG8Q99932 426 aaPredicted RBP10.69□□□□□ -0.7
HDAC9-208ENST00000417496 TSPAN13O95857 204 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms