RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 RMI2Q96E14 147 aa9.53□□□□□ -0.88
PAF1-202ENST00000416728 NKX6-2Q9C056 277 aaPredicted RBP9.53□□□□□ -0.88
PAF1-202ENST00000416728 SRRM2Q9UQ35 2752 aaKnown RBP9.53□□□□□ -0.88
PAF1-202ENST00000416728 RNF222A6NCQ9 220 aa9.52□□□□□ -0.88
PAF1-202ENST00000416728 KRBOX1C9JBD0 128 aa9.52□□□□□ -0.88
PAF1-202ENST00000416728 PTTG1O95997 202 aa9.52□□□□□ -0.88
PAF1-202ENST00000416728 GIPP09681 153 aaPredicted RBP9.52□□□□□ -0.88
PAF1-202ENST00000416728 SEC11BP0C7V7 166 aa9.52□□□□□ -0.88
PAF1-202ENST00000416728 DNLZQ5SXM8 178 aa9.52□□□□□ -0.88
PAF1-202ENST00000416728 LINC00528Q8N1L1 170 aa9.52□□□□□ -0.88
PAF1-202ENST00000416728 BAALCQ8WXS3 180 aa9.52□□□□□ -0.88
PAF1-202ENST00000416728 ZC2HC1AQ96GY0 325 aa9.52□□□□□ -0.88
PAF1-202ENST00000416728 FXYD6-FXYD2A0A087WZ82 144 aa9.51□□□□□ -0.89
PAF1-202ENST00000416728 GRIFINA4D1Z8 144 aa9.51□□□□□ -0.89
PAF1-202ENST00000416728 FAM74A7A6NL05 159 aa9.51□□□□□ -0.89
PAF1-202ENST00000416728 SH2D1AO60880 128 aa9.51□□□□□ -0.89
PAF1-202ENST00000416728 CRIP1P50238 77 aa9.51□□□□□ -0.89
PAF1-202ENST00000416728 FAM162BQ5T6X4 162 aa9.51□□□□□ -0.89
PAF1-202ENST00000416728 NIT1Q86X76 327 aa9.51□□□□□ -0.89
PAF1-202ENST00000416728 ZFP30Q9Y2G7 519 aa9.51□□□□□ -0.89
PAF1-202ENST00000416728 PHLDA3Q9Y5J5 127 aa9.51□□□□□ -0.89
PAF1-202ENST00000416728 IGKV2D-24A0A075B6R9 120 aa9.5□□□□□ -0.89
PAF1-202ENST00000416728 A0A087WWL8 130 aa9.5□□□□□ -0.89
PAF1-202ENST00000416728 RBFOX3A6NFN3 312 aa9.5□□□□□ -0.89
PAF1-202ENST00000416728 TPT1P13693 172 aaKnown RBP9.5□□□□□ -0.89
PAF1-202ENST00000416728 UBE2G1P62253 170 aa9.5□□□□□ -0.89
PAF1-202ENST00000416728 AKR1C8PQ5T2L2 129 aa9.5□□□□□ -0.89
PAF1-202ENST00000416728 COX8CQ7Z4L0 72 aa9.5□□□□□ -0.89
PAF1-202ENST00000416728 Q8N976 141 aa9.5□□□□□ -0.89
PAF1-202ENST00000416728 KLK12Q9UKR0 248 aa9.5□□□□□ -0.89
PAF1-202ENST00000416728 A0A087WX48 190 aa9.5□□□□□ -0.89
PAF1-202ENST00000416728 M0R381 172 aa9.5□□□□□ -0.89
PAF1-202ENST00000416728 LINC01620Q4KN68 170 aa9.5□□□□□ -0.89
PAF1-202ENST00000416728 SFRP2Q96HF1 295 aa9.5□□□□□ -0.89
PAF1-202ENST00000416728 FMC1Q96HJ9 113 aa9.5□□□□□ -0.89
PAF1-202ENST00000416728 TMSB15BA0A087X1C1 80 aa9.49□□□□□ -0.89
PAF1-202ENST00000416728 TRBV10-1A0A0K0K1A3 114 aa9.49□□□□□ -0.89
PAF1-202ENST00000416728 MAP1LC3B2A6NCE7 125 aa9.49□□□□□ -0.89
PAF1-202ENST00000416728 RPL36AP83881 106 aaKnown RBP9.49□□□□□ -0.89
PAF1-202ENST00000416728 ELOBQ15370 118 aa9.49□□□□□ -0.89
PAF1-202ENST00000416728 KCNIP4Q6PIL6 250 aa9.49□□□□□ -0.89
PAF1-202ENST00000416728 ZFP82Q8N141 532 aa9.49□□□□□ -0.89
PAF1-202ENST00000416728 RPL36ALQ969Q0 106 aaKnown RBP9.49□□□□□ -0.89
PAF1-202ENST00000416728 UBE2WQ96B02 151 aa9.49□□□□□ -0.89
PAF1-202ENST00000416728 DNAJC30Q96LL9 226 aa9.49□□□□□ -0.89
PAF1-202ENST00000416728 CHCHD7Q9BUK0 85 aa9.49□□□□□ -0.89
PAF1-202ENST00000416728 MAP1LC3BQ9GZQ8 125 aa9.49□□□□□ -0.89
PAF1-202ENST00000416728 LINC01559Q495D7 138 aa9.48□□□□□ -0.89
PAF1-202ENST00000416728 SCXQ7RTU7 201 aa9.48□□□□□ -0.89
PAF1-202ENST00000416728 DEFB104AQ8WTQ1 72 aa9.48□□□□□ -0.89
PAF1-202ENST00000416728 TCEAL7Q9BRU2 100 aa9.48□□□□□ -0.89
PAF1-202ENST00000416728 ZNF674Q2M3X9 581 aa9.47□□□□□ -0.89
PAF1-202ENST00000416728 CST9LP1Q5W188 147 aa9.47□□□□□ -0.89
PAF1-202ENST00000416728 STOML3Q8TAV4 291 aa9.47□□□□□ -0.89
PAF1-202ENST00000416728 TRBV7-3A0A075B6L6 115 aa9.46□□□□□ -0.9
PAF1-202ENST00000416728 TRBV6-1A0A0K0K1D8 114 aa9.46□□□□□ -0.9
PAF1-202ENST00000416728 LTAP01374 205 aa9.46□□□□□ -0.9
PAF1-202ENST00000416728 FHITP49789 147 aa9.46□□□□□ -0.9
PAF1-202ENST00000416728 UBE2D3P61077 147 aa9.46□□□□□ -0.9
PAF1-202ENST00000416728 UBE2D2P62837 147 aa9.46□□□□□ -0.9
PAF1-202ENST00000416728 DNAH8Q96JB1 4490 aa9.46□□□□□ -0.9
PAF1-202ENST00000416728 KRTAP29-1A8MX34 341 aaPredicted RBP9.45□□□□□ -0.9
PAF1-202ENST00000416728 AKR1C3P42330 323 aa9.45□□□□□ -0.9
PAF1-202ENST00000416728 Q0VG73 95 aa9.45□□□□□ -0.9
PAF1-202ENST00000416728 RGS21Q2M5E4 152 aa9.45□□□□□ -0.9
PAF1-202ENST00000416728 ATRAIDQ6UW56 229 aa9.45□□□□□ -0.9
PAF1-202ENST00000416728 CHAC1Q9BUX1 264 aa9.45□□□□□ -0.9
PAF1-202ENST00000416728 TMEM262E9PQX1 116 aa9.44□□□□□ -0.9
PAF1-202ENST00000416728 C1orf43Q9BWL3 253 aa9.44□□□□□ -0.9
PAF1-202ENST00000416728 TRBV6-8A0A0A6YYG3 113 aa9.43□□□□□ -0.9
PAF1-202ENST00000416728 ARPC5O15511 151 aa9.43□□□□□ -0.9
PAF1-202ENST00000416728 C14orf177Q52M58 125 aa9.43□□□□□ -0.9
PAF1-202ENST00000416728 OR10G8Q8NGN5 311 aa9.43□□□□□ -0.9
PAF1-202ENST00000416728 CYTL1Q9NRR1 136 aa9.43□□□□□ -0.9
PAF1-202ENST00000416728 PAGE4O60829 102 aa9.42□□□□□ -0.9
PAF1-202ENST00000416728 CRPP02741 224 aa9.42□□□□□ -0.9
PAF1-202ENST00000416728 RAB4BP61018 213 aa9.42□□□□□ -0.9
PAF1-202ENST00000416728 ZNF56Q15929 161 aa9.42□□□□□ -0.9
PAF1-202ENST00000416728 CIRBP-AS1Q8TBR5 109 aa9.42□□□□□ -0.9
PAF1-202ENST00000416728 G3V3Q6 166 aa9.41□□□□□ -0.9
PAF1-202ENST00000416728 RPL19P84098 196 aaKnown RBP9.41□□□□□ -0.9
PAF1-202ENST00000416728 C15orf54Q8N8G6 183 aa9.41□□□□□ -0.9
PAF1-202ENST00000416728 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.41□□□□□ -0.9
PAF1-202ENST00000416728 NEXN-AS1Q8NBZ9 246 aa9.41□□□□□ -0.9
PAF1-202ENST00000416728 OR10AG1Q8NH19 301 aa9.41□□□□□ -0.9
PAF1-202ENST00000416728 ZNF471Q9BX82 626 aaPredicted RBP9.41□□□□□ -0.9
PAF1-202ENST00000416728 ANGP03950 147 aaKnown RBP9.4□□□□□ -0.9
PAF1-202ENST00000416728 S100A9P06702 114 aaKnown RBP9.4□□□□□ -0.9
PAF1-202ENST00000416728 CXCL1P09341 107 aa9.4□□□□□ -0.9
PAF1-202ENST00000416728 MPV17L2Q567V2 206 aa9.4□□□□□ -0.9
PAF1-202ENST00000416728 ENHOQ6UWT2 76 aa9.4□□□□□ -0.9
PAF1-202ENST00000416728 CHCHD5Q9BSY4 110 aa9.4□□□□□ -0.9
PAF1-202ENST00000416728 PKIAP61925 76 aa9.39□□□□□ -0.91
PAF1-202ENST00000416728 PRR27Q6MZM9 219 aa9.39□□□□□ -0.91
PAF1-202ENST00000416728 SFT2D1Q8WV19 159 aa9.39□□□□□ -0.91
PAF1-202ENST00000416728 SCO2A0A1W2PP80 73 aa9.38□□□□□ -0.91
PAF1-202ENST00000416728 IGLV2-8P01709 118 aa9.38□□□□□ -0.91
PAF1-202ENST00000416728 KRTAP10-4P60372 401 aaPredicted RBP9.38□□□□□ -0.91
PAF1-202ENST00000416728 SPANXN1Q5VSR9 72 aa9.38□□□□□ -0.91
PAF1-202ENST00000416728 BAGE2Q86Y30 109 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms