RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 COL4A6Q14031 1691 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 COL2A1P02458 1487 aaPredicted RBP2.48□□□□□ -2.01
SF3B1-203ENST00000414174 TUBGCP6Q96RT7 1819 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 IGLV8-61A0A075B6I0 122 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 TMSB15BA0A087X1C1 80 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 LOC107984156A0A0G2JMH3 177 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 TRBV10-3A0A0K0K1G6 114 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 TEX49A0A1B0GTD5 131 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 hDV103S1A0JD37 113 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 TMEM30CPA0ZSE6 113 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 HCG22E2RYF7 251 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 H3BVH4 76 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 ERC2-IT1O76042 136 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 PPYP01298 95 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 ZNF22P17026 224 aaPredicted RBP2.48□□□□□ -2.01
SF3B1-203ENST00000414174 CMC4P56277 68 aaPredicted RBP2.48□□□□□ -2.01
SF3B1-203ENST00000414174 ZNF117Q03924 483 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 PLGLAQ15195 96 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 ATXN8Q156A1 80 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 FAM229BQ4G0N7 80 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 RNASE13Q5GAN3 156 aaKnown RBP2.48□□□□□ -2.01
SF3B1-203ENST00000414174 ATP5EP2Q5VTU8 51 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 C2orf66Q6UXQ4 117 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 ARL17AQ8IVW1 177 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 Q8IYB0 196 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 DYNAPQ8N1N2 210 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 Q8N6K4 173 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 Q8NDZ9 215 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 ZNF563Q8TA94 476 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 SMCR5Q8TEV8 140 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 TXNDC17Q9BRA2 123 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 CHCHD7Q9BUK0 85 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 PROK2Q9HC23 129 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 CDC42SE1Q9NRR8 79 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 UBE2D4Q9Y2X8 147 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 LRP5O75197 1615 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 THSD7BQ9C0I4 1608 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 COL14A1Q05707 1796 aaKnown RBP2.48□□□□□ -2.01
SF3B1-203ENST00000414174 PTPRDP23468 1912 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 C3P01024 1663 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 ADAMTS7Q9UKP4 1686 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 IGKV2D-30A0A075B6S6 120 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 TRAV22A0A0B4J277 110 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 IGKV6D-41A0A0C4DH26 115 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 IGLV5-39A0A0G2JS06 123 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 TMEM223A0PJW6 202 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 A6NIN4 97 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 B4DSR2 109 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 E7EUB6 86 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 F8WEM9 126 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 K7ERS5 55 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 SH2D1AO60880 128 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 IGHV3-23P01764 117 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 MSMBP08118 114 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 ROMO1P60602 79 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 C15orf32Q32M92 178 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 LUZP6Q538Z0 58 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 CAMK2N1Q7Z7J9 78 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 QSER1Q2KHR3 1735 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 TNS1Q9HBL0 1735 aaKnown RBP2.47□□□□□ -2.01
SF3B1-203ENST00000414174 CPAMD8Q8IZJ3 1885 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 RREB1Q92766 1687 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 EXPH5Q8NEV8 1989 aa2.47□□□□□ -2.01
SF3B1-203ENST00000414174 ANAPC1Q9H1A4 1944 aa2.46□□□□□ -2.02
SF3B1-203ENST00000414174 LTBP4Q8N2S1 1624 aa2.46□□□□□ -2.02
SF3B1-203ENST00000414174 IGKV2D-26A0A0A0MRZ7 120 aa2.46□□□□□ -2.02
SF3B1-203ENST00000414174 IGHV3-49A0A0A0MS15 119 aa2.46□□□□□ -2.02
SF3B1-203ENST00000414174 IGHV3-66A0A0C4DH42 116 aa2.46□□□□□ -2.02
SF3B1-203ENST00000414174 A0A0J9YXY3 114 aa2.46□□□□□ -2.02
SF3B1-203ENST00000414174 C5orf67F2Z3F1 127 aa2.46□□□□□ -2.02
SF3B1-203ENST00000414174 PLA2G2AP14555 144 aa2.46□□□□□ -2.02
SF3B1-203ENST00000414174 RPL36AP83881 106 aaKnown RBP2.46□□□□□ -2.02
SF3B1-203ENST00000414174 Q5VV11 94 aa2.46□□□□□ -2.02
SF3B1-203ENST00000414174 ADM2Q7Z4H4 148 aa2.46□□□□□ -2.02
SF3B1-203ENST00000414174 LIMD2Q9BT23 127 aa2.46□□□□□ -2.02
SF3B1-203ENST00000414174 AFDNP55196 1824 aaKnown RBP2.46□□□□□ -2.02
SF3B1-203ENST00000414174 DSCAML1Q8TD84 2053 aa2.46□□□□□ -2.02
SF3B1-203ENST00000414174 NYNRINQ9P2P1 1898 aaKnown RBP2.45□□□□□ -2.02
SF3B1-203ENST00000414174 PLXNA1Q9UIW2 1896 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 SNRNP200O75643 2136 aaKnown RBP2.45□□□□□ -2.02
SF3B1-203ENST00000414174 LTBP2Q14767 1821 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 SLX4Q8IY92 1834 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 NHSQ6T4R5 1651 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 SDHAF1A6NFY7 115 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 LINC01549A6NIU2 74 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 TMEM14DPA8MWL7 114 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 BPY2O14599 106 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 LECT2O14960 151 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 LY6HO94772 140 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 IGLV3-25P01717 112 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 COX6CP09669 75 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 IFI6P09912 130 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 C1orf134Q5TEV5 83 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 GDF5OSQ5U4N7 250 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 C2orf82Q6UX34 121 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 ZNF818PQ6ZRF7 136 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 Q6ZTC4 211 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 C20orf203Q8NBC4 194 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 SPTSSBQ8NFR3 76 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 ZNF355PQ9NSJ1 428 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms