RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 IGHV4-30-4P0DP06 118 aa7.09□□□□□ -1.27
SMPD4-203ENST00000412570 LINC01559Q495D7 138 aa7.09□□□□□ -1.27
SMPD4-203ENST00000412570 ZNF664Q8N3J9 261 aa7.09□□□□□ -1.27
SMPD4-203ENST00000412570 GNB1LQ9BYB4 327 aa7.08□□□□□ -1.28
SMPD4-203ENST00000412570 BTF3P20290 206 aaKnown RBP7.08□□□□□ -1.28
SMPD4-203ENST00000412570 RRN3P1Q2M238 152 aa7.08□□□□□ -1.28
SMPD4-203ENST00000412570 SHISA2Q6UWI4 295 aa7.08□□□□□ -1.28
SMPD4-203ENST00000412570 LINC00173Q6ZV60 143 aa7.08□□□□□ -1.28
SMPD4-203ENST00000412570 CSTL1Q9H114 145 aa7.08□□□□□ -1.28
SMPD4-203ENST00000412570 LOC102724200A0A096LPH7 203 aaPredicted RBP7.07□□□□□ -1.28
SMPD4-203ENST00000412570 IGLC6P0CF74 106 aa7.07□□□□□ -1.28
SMPD4-203ENST00000412570 TRPT1Q86TN4 253 aaKnown RBP7.07□□□□□ -1.28
SMPD4-203ENST00000412570 NIT1Q86X76 327 aa7.07□□□□□ -1.28
SMPD4-203ENST00000412570 C18orf32Q8TCD1 76 aa7.07□□□□□ -1.28
SMPD4-203ENST00000412570 A0A0J9YY99 117 aa7.07□□□□□ -1.28
SMPD4-203ENST00000412570 RPS20P60866 119 aaKnown RBP7.07□□□□□ -1.28
SMPD4-203ENST00000412570 FA2HQ7L5A8 372 aa7.06□□□□□ -1.28
SMPD4-203ENST00000412570 OR11H2Q8NH07 326 aa7.06□□□□□ -1.28
SMPD4-203ENST00000412570 ALKBH7Q9BT30 221 aaPredicted RBP7.06□□□□□ -1.28
SMPD4-203ENST00000412570 C19orf73Q9NVV2 129 aa7.06□□□□□ -1.28
SMPD4-203ENST00000412570 FBLL1A6NHQ2 334 aaKnown RBP7.06□□□□□ -1.28
SMPD4-203ENST00000412570 RAB4AP20338 218 aa7.06□□□□□ -1.28
SMPD4-203ENST00000412570 PCP4P48539 62 aa7.06□□□□□ -1.28
SMPD4-203ENST00000412570 FAM104BQ5XKR9 115 aa7.06□□□□□ -1.28
SMPD4-203ENST00000412570 KCNS1Q96KK3 526 aa7.06□□□□□ -1.28
SMPD4-203ENST00000412570 NDUFAF3Q9BU61 184 aa7.06□□□□□ -1.28
SMPD4-203ENST00000412570 TENM2Q9NT68 2774 aa7.06□□□□□ -1.28
SMPD4-203ENST00000412570 A0A1B0GXF2 115 aa7.06□□□□□ -1.28
SMPD4-203ENST00000412570 GIG44P09565 113 aaPredicted RBP7.06□□□□□ -1.28
SMPD4-203ENST00000412570 SMIM12Q96EX1 92 aa7.06□□□□□ -1.28
SMPD4-203ENST00000412570 Q0VG73 95 aa7.05□□□□□ -1.28
SMPD4-203ENST00000412570 ZNF479Q96JC4 524 aa7.05□□□□□ -1.28
SMPD4-203ENST00000412570 ZNF747Q9BV97 191 aa7.05□□□□□ -1.28
SMPD4-203ENST00000412570 GOLT1BQ9Y3E0 138 aa7.05□□□□□ -1.28
SMPD4-203ENST00000412570 RNASE13Q5GAN3 156 aaKnown RBP7.05□□□□□ -1.28
SMPD4-203ENST00000412570 Q6AWC8 147 aa7.05□□□□□ -1.28
SMPD4-203ENST00000412570 ORMDL3Q8N138 153 aa7.05□□□□□ -1.28
SMPD4-203ENST00000412570 TRAV25A0A0B4J276 109 aa7.05□□□□□ -1.28
SMPD4-203ENST00000412570 IGKV3OR2-268A0A0C4DH90 116 aa7.05□□□□□ -1.28
SMPD4-203ENST00000412570 LOC100131303A0A0U1RQF7 123 aa7.05□□□□□ -1.28
SMPD4-203ENST00000412570 BEAN1Q3B7T3 259 aa7.05□□□□□ -1.28
SMPD4-203ENST00000412570 CT83Q5H943 113 aa7.05□□□□□ -1.28
SMPD4-203ENST00000412570 SAMD13Q5VXD3 122 aa7.05□□□□□ -1.28
SMPD4-203ENST00000412570 Q6ZSN1 163 aa7.05□□□□□ -1.28
SMPD4-203ENST00000412570 AP1S3Q96PC3 154 aa7.05□□□□□ -1.28
SMPD4-203ENST00000412570 TNFRSF6BO95407 300 aa7.04□□□□□ -1.28
SMPD4-203ENST00000412570 TRBV6-1A0A0K0K1D8 114 aa7.04□□□□□ -1.28
SMPD4-203ENST00000412570 ESDP10768 282 aa7.04□□□□□ -1.28
SMPD4-203ENST00000412570 LBHQ53QV2 105 aaPredicted RBP7.04□□□□□ -1.28
SMPD4-203ENST00000412570 ZC2HC1BQ5TFG8 222 aa7.04□□□□□ -1.28
SMPD4-203ENST00000412570 FAM19A4Q96LR4 140 aa7.04□□□□□ -1.28
SMPD4-203ENST00000412570 GFRA4Q9GZZ7 299 aa7.04□□□□□ -1.28
SMPD4-203ENST00000412570 LINC00310P59036 64 aa7.03□□□□□ -1.28
SMPD4-203ENST00000412570 OR10J3Q5JRS4 329 aa7.03□□□□□ -1.28
SMPD4-203ENST00000412570 OR4C5Q8NGB2 326 aa7.03□□□□□ -1.28
SMPD4-203ENST00000412570 GAGE12JA6NER3 117 aa7.03□□□□□ -1.28
SMPD4-203ENST00000412570 CTRLP40313 264 aa7.03□□□□□ -1.28
SMPD4-203ENST00000412570 GAGE1Q13065 139 aa7.03□□□□□ -1.28
SMPD4-203ENST00000412570 GAGE4Q13068 117 aa7.03□□□□□ -1.28
SMPD4-203ENST00000412570 GAGE5Q13069 117 aa7.03□□□□□ -1.28
SMPD4-203ENST00000412570 GAGE13Q4V321 117 aa7.03□□□□□ -1.28
SMPD4-203ENST00000412570 Q6ZWC4 215 aa7.03□□□□□ -1.28
SMPD4-203ENST00000412570 RNF185Q96GF1 192 aa7.03□□□□□ -1.28
SMPD4-203ENST00000412570 ZNF415Q09FC8 603 aa7.03□□□□□ -1.28
SMPD4-203ENST00000412570 SUMO4Q6EEV6 95 aa7.03□□□□□ -1.28
SMPD4-203ENST00000412570 GATD1Q8NB37 220 aa7.03□□□□□ -1.28
SMPD4-203ENST00000412570 SIGLEC8Q9NYZ4 499 aa7.03□□□□□ -1.28
SMPD4-203ENST00000412570 LENEPQ9Y5L5 61 aa7.03□□□□□ -1.28
SMPD4-203ENST00000412570 TRGV11A0A075B6L2 103 aa7.02□□□□□ -1.29
SMPD4-203ENST00000412570 RNF151Q2KHN1 245 aa7.02□□□□□ -1.29
SMPD4-203ENST00000412570 SYT8Q8NBV8 401 aa7.02□□□□□ -1.29
SMPD4-203ENST00000412570 ANK2Q01484 3957 aa7.02□□□□□ -1.29
SMPD4-203ENST00000412570 TRGV4A0A0C4DH28 118 aa7.02□□□□□ -1.29
SMPD4-203ENST00000412570 RASL11AQ6T310 242 aa7.02□□□□□ -1.29
SMPD4-203ENST00000412570 ZNF705AQ6ZN79 300 aaPredicted RBP7.02□□□□□ -1.29
SMPD4-203ENST00000412570 ATP5L2Q7Z4Y8 100 aa7.02□□□□□ -1.29
SMPD4-203ENST00000412570 VAMP8Q9BV40 100 aa7.02□□□□□ -1.29
SMPD4-203ENST00000412570 DPH3P1Q9H4G8 78 aa7.02□□□□□ -1.29
SMPD4-203ENST00000412570 LINC00614P0C842 121 aa7.01□□□□□ -1.29
SMPD4-203ENST00000412570 FAM222AQ5U5X8 452 aa7.01□□□□□ -1.29
SMPD4-203ENST00000412570 CEMP1Q6PRD7 247 aaPredicted RBP7.01□□□□□ -1.29
SMPD4-203ENST00000412570 OR2K2Q8NGT1 345 aa7.01□□□□□ -1.29
SMPD4-203ENST00000412570 C2orf88Q9BSF0 95 aa7.01□□□□□ -1.29
SMPD4-203ENST00000412570 DNHD1Q96M86 4753 aa7.01□□□□□ -1.29
SMPD4-203ENST00000412570 TMEM191AQ9H0A3 160 aa7.01□□□□□ -1.29
SMPD4-203ENST00000412570 AP5S1Q9NUS5 200 aa7.01□□□□□ -1.29
SMPD4-203ENST00000412570 OR5AL1P0C617 328 aa7.01□□□□□ -1.29
SMPD4-203ENST00000412570 KIR2DL5BA0A0G2JN68 375 aa7□□□□□ -1.29
SMPD4-203ENST00000412570 KIR2DL5BA0A0G2JPC4 375 aa7□□□□□ -1.29
SMPD4-203ENST00000412570 MAJINQ3KP22 176 aa7□□□□□ -1.29
SMPD4-203ENST00000412570 KIR2DL5AQ8N109 375 aa7□□□□□ -1.29
SMPD4-203ENST00000412570 ZNRF2Q8NHG8 242 aa7□□□□□ -1.29
SMPD4-203ENST00000412570 URB1-AS1Q96HZ7 61 aa7□□□□□ -1.29
SMPD4-203ENST00000412570 OPRPNQ99935 248 aaPredicted RBP7□□□□□ -1.29
SMPD4-203ENST00000412570 MAP1LC3AQ9H492 121 aa7□□□□□ -1.29
SMPD4-203ENST00000412570 TP73-AS1Q9UF72 201 aa7□□□□□ -1.29
SMPD4-203ENST00000412570 PAM16Q9Y3D7 125 aa7□□□□□ -1.29
SMPD4-203ENST00000412570 M0R143 59 aa7□□□□□ -1.29
SMPD4-203ENST00000412570 NUDT3O95989 172 aa7□□□□□ -1.29
SMPD4-203ENST00000412570 INSL3P51460 131 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms