RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 V9GYV3 84 aa-1.19□□□□□ -2.6
RNU4-55P-201ENST00000410731 MYH1P12882 1939 aa-1.19□□□□□ -2.6
RNU4-55P-201ENST00000410731 SIPA1L3O60292 1781 aaPredicted RBP-1.19□□□□□ -2.6
RNU4-55P-201ENST00000410731 WNK3Q9BYP7 1800 aa-1.19□□□□□ -2.6
RNU4-55P-201ENST00000410731 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.2□□□□□ -2.6
RNU4-55P-201ENST00000410731 PTPRGP23470 1445 aa-1.2□□□□□ -2.6
RNU4-55P-201ENST00000410731 CASZ1Q86V15 1759 aa-1.2□□□□□ -2.6
RNU4-55P-201ENST00000410731 CXorf51AA0A1B0GTR3 108 aa-1.2□□□□□ -2.6
RNU4-55P-201ENST00000410731 M0R2P5 195 aa-1.2□□□□□ -2.6
RNU4-55P-201ENST00000410731 SPINK4O60575 86 aa-1.2□□□□□ -2.6
RNU4-55P-201ENST00000410731 ADCYAP1P18509 176 aa-1.2□□□□□ -2.6
RNU4-55P-201ENST00000410731 MAXP61244 160 aa-1.2□□□□□ -2.6
RNU4-55P-201ENST00000410731 OR2T2Q6IF00 324 aa-1.2□□□□□ -2.6
RNU4-55P-201ENST00000410731 CYP2G1PQ6ZSU1 146 aa-1.2□□□□□ -2.6
RNU4-55P-201ENST00000410731 OR4S1Q8NGB4 309 aa-1.2□□□□□ -2.6
RNU4-55P-201ENST00000410731 OR5H6Q8NGV6 325 aa-1.2□□□□□ -2.6
RNU4-55P-201ENST00000410731 COX7B2Q8TF08 81 aa-1.2□□□□□ -2.6
RNU4-55P-201ENST00000410731 VPS25Q9BRG1 176 aa-1.2□□□□□ -2.6
RNU4-55P-201ENST00000410731 FXYD6Q9H0Q3 95 aa-1.2□□□□□ -2.6
RNU4-55P-201ENST00000410731 APOBP04114 4563 aaKnown RBP-1.2□□□□□ -2.6
RNU4-55P-201ENST00000410731 ZNF142P52746 1687 aaPredicted RBP-1.2□□□□□ -2.6
RNU4-55P-201ENST00000410731 DLC1Q96QB1 1528 aa-1.2□□□□□ -2.6
RNU4-55P-201ENST00000410731 USP9XQ93008 2570 aaPredicted RBP-1.21□□□□□ -2.6
RNU4-55P-201ENST00000410731 PHIPQ8WWQ0 1821 aa-1.21□□□□□ -2.6
RNU4-55P-201ENST00000410731 A0A1B0GW64 132 aa-1.21□□□□□ -2.6
RNU4-55P-201ENST00000410731 I3L2K1 104 aa-1.21□□□□□ -2.6
RNU4-55P-201ENST00000410731 NPFFO15130 113 aa-1.21□□□□□ -2.6
RNU4-55P-201ENST00000410731 IFNA6P05013 189 aa-1.21□□□□□ -2.6
RNU4-55P-201ENST00000410731 AP3S1Q92572 193 aa-1.21□□□□□ -2.6
RNU4-55P-201ENST00000410731 PRELID3AQ96N28 172 aa-1.21□□□□□ -2.6
RNU4-55P-201ENST00000410731 PHB2Q99623 299 aa-1.21□□□□□ -2.6
RNU4-55P-201ENST00000410731 PARVGQ9HBI0 331 aa-1.21□□□□□ -2.6
RNU4-55P-201ENST00000410731 CMYA5Q8N3K9 4069 aa-1.21□□□□□ -2.6
RNU4-55P-201ENST00000410731 ANKRD31Q8N7Z5 1873 aa-1.22□□□□□ -2.6
RNU4-55P-201ENST00000410731 WDR7Q9Y4E6 1490 aa-1.22□□□□□ -2.6
RNU4-55P-201ENST00000410731 TRAV1-2A0A0B4J238 106 aa-1.22□□□□□ -2.6
RNU4-55P-201ENST00000410731 TRBV6-1A0A0K0K1D8 114 aa-1.22□□□□□ -2.6
RNU4-55P-201ENST00000410731 H3BQV1 296 aa-1.22□□□□□ -2.6
RNU4-55P-201ENST00000410731 CTXN2P0C2S0 81 aa-1.22□□□□□ -2.6
RNU4-55P-201ENST00000410731 FABP2P12104 132 aa-1.22□□□□□ -2.6
RNU4-55P-201ENST00000410731 SLC25A4P12235 298 aa-1.22□□□□□ -2.6
RNU4-55P-201ENST00000410731 COX6B1P14854 86 aa-1.22□□□□□ -2.6
RNU4-55P-201ENST00000410731 PPP1R2P41236 205 aa-1.22□□□□□ -2.6
RNU4-55P-201ENST00000410731 BLCAPP62952 87 aa-1.22□□□□□ -2.6
RNU4-55P-201ENST00000410731 OR8B8Q15620 311 aa-1.22□□□□□ -2.6
RNU4-55P-201ENST00000410731 C20orf197Q8N268 126 aa-1.22□□□□□ -2.6
RNU4-55P-201ENST00000410731 PPDPFLQ8WWR9 84 aa-1.22□□□□□ -2.6
RNU4-55P-201ENST00000410731 OTORQ9NRC9 128 aa-1.22□□□□□ -2.6
RNU4-55P-201ENST00000410731 TEX15Q9BXT5 2789 aa-1.22□□□□□ -2.61
RNU4-55P-201ENST00000410731 KIF13AQ9H1H9 1805 aa-1.22□□□□□ -2.61
RNU4-55P-201ENST00000410731 ZNF609O15014 1411 aa-1.23□□□□□ -2.61
RNU4-55P-201ENST00000410731 TRAPPC8Q9Y2L5 1435 aa-1.23□□□□□ -2.61
RNU4-55P-201ENST00000410731 TCOF1Q13428 1488 aaKnown RBP-1.23□□□□□ -2.61
RNU4-55P-201ENST00000410731 KDM3BQ7LBC6 1761 aa-1.23□□□□□ -2.61
RNU4-55P-201ENST00000410731 ZMYM4Q5VZL5 1548 aa-1.23□□□□□ -2.61
RNU4-55P-201ENST00000410731 IGHV1-24A0A0C4DH33 117 aa-1.23□□□□□ -2.61
RNU4-55P-201ENST00000410731 DEFB135Q30KP9 77 aa-1.23□□□□□ -2.61
RNU4-55P-201ENST00000410731 PIGYQ3MUY2 71 aa-1.23□□□□□ -2.61
RNU4-55P-201ENST00000410731 OR51A4Q8NGJ6 313 aa-1.23□□□□□ -2.61
RNU4-55P-201ENST00000410731 DGCR14Q96DF8 476 aaKnown RBP-1.23□□□□□ -2.61
RNU4-55P-201ENST00000410731 SDF2Q99470 211 aa-1.23□□□□□ -2.61
RNU4-55P-201ENST00000410731 SCN3BQ9NY72 215 aa-1.23□□□□□ -2.61
RNU4-55P-201ENST00000410731 RELNP78509 3460 aa-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 WDR97A6NE52 1622 aa-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 TRAV16A0A0A6YYK6 109 aaPredicted RBP-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 ATG12O94817 140 aa-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 CKS2P33552 79 aa-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 S100A3P33764 101 aa-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 NPC2P61916 151 aa-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 RPL19P84098 196 aaKnown RBP-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 Q5VV11 94 aa-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 C3orf33Q6P1S2 294 aa-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 CROCCP2Q86T23 111 aa-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 NDUFA11Q86Y39 141 aa-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 MORN4Q8NDC4 146 aa-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 OTOSQ8NHW6 89 aa-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 BRK1Q8WUW1 75 aa-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 IFI27L1Q96BM0 104 aa-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 BORCS8Q96FH0 119 aa-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 CARD19Q96LW7 228 aa-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 LRTM1Q9HBL6 345 aa-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 ADGBQ8N7X0 1667 aa-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 RIF1Q5UIP0 2472 aaKnown RBP-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 PARP14Q460N5 1801 aa-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 ARFGEF1Q9Y6D6 1849 aa-1.24□□□□□ -2.61
RNU4-55P-201ENST00000410731 ERCC6L2Q5T890 1561 aa-1.25□□□□□ -2.61
RNU4-55P-201ENST00000410731 DNAH1Q9P2D7 4330 aa-1.25□□□□□ -2.61
RNU4-55P-201ENST00000410731 LRP6O75581 1613 aa-1.25□□□□□ -2.61
RNU4-55P-201ENST00000410731 PAPPAQ13219 1627 aa-1.25□□□□□ -2.61
RNU4-55P-201ENST00000410731 NRXN2Q9P2S2 1712 aa-1.25□□□□□ -2.61
RNU4-55P-201ENST00000410731 IFT172Q9UG01 1749 aa-1.25□□□□□ -2.61
RNU4-55P-201ENST00000410731 TRBV27A0A0K0K1C4 114 aa-1.25□□□□□ -2.61
RNU4-55P-201ENST00000410731 MAP1LC3B2A6NCE7 125 aa-1.25□□□□□ -2.61
RNU4-55P-201ENST00000410731 CSN2P05814 226 aa-1.25□□□□□ -2.61
RNU4-55P-201ENST00000410731 AKR1D1P51857 326 aa-1.25□□□□□ -2.61
RNU4-55P-201ENST00000410731 DEFB112Q30KQ8 113 aa-1.25□□□□□ -2.61
RNU4-55P-201ENST00000410731 WFDC6Q9BQY6 131 aa-1.25□□□□□ -2.61
RNU4-55P-201ENST00000410731 LXNQ9BS40 222 aa-1.25□□□□□ -2.61
RNU4-55P-201ENST00000410731 NPVFQ9HCQ7 196 aa-1.25□□□□□ -2.61
RNU4-55P-201ENST00000410731 MYH2Q9UKX2 1941 aa-1.25□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms