RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 SVBPQ8N300 66 aa11.68□□□□□ -0.54
SUMO1-208ENST00000409627 SAMD10Q9BYL1 202 aa11.68□□□□□ -0.54
SUMO1-208ENST00000409627 MSRB1Q9NZV6 116 aa11.68□□□□□ -0.54
SUMO1-208ENST00000409627 A0A1B0GUT8 65 aa11.67□□□□□ -0.54
SUMO1-208ENST00000409627 CRYGDP07320 174 aa11.67□□□□□ -0.54
SUMO1-208ENST00000409627 TRGC1P0CF51 173 aa11.67□□□□□ -0.54
SUMO1-208ENST00000409627 TWIST1Q15672 202 aa11.67□□□□□ -0.54
SUMO1-208ENST00000409627 A0A087WWC5 75 aa11.66□□□□□ -0.54
SUMO1-208ENST00000409627 A0A087WWL8 130 aa11.66□□□□□ -0.54
SUMO1-208ENST00000409627 C7orf77A4D0Y5 90 aa11.66□□□□□ -0.54
SUMO1-208ENST00000409627 SNAPINO95295 136 aa11.66□□□□□ -0.54
SUMO1-208ENST00000409627 GATA1P15976 413 aaPredicted RBP11.66□□□□□ -0.54
SUMO1-208ENST00000409627 CASC10Q5T4H9 136 aa11.66□□□□□ -0.54
SUMO1-208ENST00000409627 FAM74A4Q5TZK3 123 aa11.66□□□□□ -0.54
SUMO1-208ENST00000409627 TMEM88Q6PEY1 159 aa11.66□□□□□ -0.54
SUMO1-208ENST00000409627 PRO0255Q9UI72 69 aa11.66□□□□□ -0.54
SUMO1-208ENST00000409627 CSMD3Q7Z407 3707 aa11.65□□□□□ -0.54
SUMO1-208ENST00000409627 IGHV3-73A0A0B4J1V6 119 aa11.65□□□□□ -0.54
SUMO1-208ENST00000409627 IGLL5B9A064 214 aa11.65□□□□□ -0.54
SUMO1-208ENST00000409627 H3BNG1 76 aa11.65□□□□□ -0.54
SUMO1-208ENST00000409627 CRYBA4P53673 196 aa11.65□□□□□ -0.54
SUMO1-208ENST00000409627 RIGQ13278 110 aa11.65□□□□□ -0.54
SUMO1-208ENST00000409627 C14orf178Q8N769 122 aaPredicted RBP11.65□□□□□ -0.54
SUMO1-208ENST00000409627 IMMP2LQ96T52 175 aa11.65□□□□□ -0.54
SUMO1-208ENST00000409627 TMEM242Q9NWH2 141 aa11.65□□□□□ -0.54
SUMO1-208ENST00000409627 HHLA3Q9XRX5 114 aa11.65□□□□□ -0.54
SUMO1-208ENST00000409627 KIF25-AS1Q9Y6Z4 181 aa11.65□□□□□ -0.54
SUMO1-208ENST00000409627 TRAV26-1A0A087WT03 109 aa11.64□□□□□ -0.55
SUMO1-208ENST00000409627 SMIM17P0DL12 118 aa11.64□□□□□ -0.55
SUMO1-208ENST00000409627 TCTAP57738 103 aa11.64□□□□□ -0.55
SUMO1-208ENST00000409627 RPS10P5Q9NQ39 176 aa11.64□□□□□ -0.55
SUMO1-208ENST00000409627 STARD9Q9P2P6 4700 aa11.64□□□□□ -0.55
SUMO1-208ENST00000409627 TRBV6-4A0A1B0GX49 114 aa11.63□□□□□ -0.55
SUMO1-208ENST00000409627 EVI2AP22794 236 aa11.63□□□□□ -0.55
SUMO1-208ENST00000409627 VSIG2Q96IQ7 327 aa11.63□□□□□ -0.55
SUMO1-208ENST00000409627 DPH3P1Q9H4G8 78 aa11.63□□□□□ -0.55
SUMO1-208ENST00000409627 DYNC2H1Q8NCM8 4307 aaKnown RBP11.62□□□□□ -0.55
SUMO1-208ENST00000409627 A0A0J9YY99 117 aa11.62□□□□□ -0.55
SUMO1-208ENST00000409627 A0A1B0GW15 77 aa11.62□□□□□ -0.55
SUMO1-208ENST00000409627 PAX4O43316 350 aa11.62□□□□□ -0.55
SUMO1-208ENST00000409627 FAM3BP58499 235 aaPredicted RBP11.62□□□□□ -0.55
SUMO1-208ENST00000409627 LINC00315P59091 139 aa11.62□□□□□ -0.55
SUMO1-208ENST00000409627 RAB4BP61018 213 aa11.62□□□□□ -0.55
SUMO1-208ENST00000409627 SMIM15Q7Z3B0 74 aa11.62□□□□□ -0.55
SUMO1-208ENST00000409627 SLC25A29Q8N8R3 303 aa11.62□□□□□ -0.55
SUMO1-208ENST00000409627 C15orf53Q8NAA6 179 aa11.62□□□□□ -0.55
SUMO1-208ENST00000409627 RHOHQ15669 191 aa11.61□□□□□ -0.55
SUMO1-208ENST00000409627 ZNF56Q15929 161 aa11.61□□□□□ -0.55
SUMO1-208ENST00000409627 KCNIP4Q6PIL6 250 aa11.61□□□□□ -0.55
SUMO1-208ENST00000409627 Q6ZSN1 163 aa11.61□□□□□ -0.55
SUMO1-208ENST00000409627 ATP5L2Q7Z4Y8 100 aa11.61□□□□□ -0.55
SUMO1-208ENST00000409627 APLNQ9ULZ1 77 aa11.61□□□□□ -0.55
SUMO1-208ENST00000409627 A0A1B0GXF2 115 aa11.6□□□□□ -0.55
SUMO1-208ENST00000409627 K7EQD1 137 aa11.6□□□□□ -0.55
SUMO1-208ENST00000409627 HBBP68871 147 aa11.6□□□□□ -0.55
SUMO1-208ENST00000409627 PRADC1Q9BSG0 188 aa11.6□□□□□ -0.55
SUMO1-208ENST00000409627 TMEM191AQ9H0A3 160 aa11.6□□□□□ -0.55
SUMO1-208ENST00000409627 TRAV9-1A0A075B6T8 112 aa11.59□□□□□ -0.55
SUMO1-208ENST00000409627 S100A8P05109 93 aa11.59□□□□□ -0.55
SUMO1-208ENST00000409627 MGPP08493 103 aa11.59□□□□□ -0.55
SUMO1-208ENST00000409627 S100PP25815 95 aa11.59□□□□□ -0.55
SUMO1-208ENST00000409627 MRPL54Q6P161 138 aaKnown RBP11.59□□□□□ -0.55
SUMO1-208ENST00000409627 BTF3L4Q96K17 158 aa11.59□□□□□ -0.55
SUMO1-208ENST00000409627 F5H697 171 aa11.58□□□□□ -0.56
SUMO1-208ENST00000409627 GYPEP15421 78 aa11.58□□□□□ -0.56
SUMO1-208ENST00000409627 GATD1Q8NB37 220 aa11.58□□□□□ -0.56
SUMO1-208ENST00000409627 ICOSQ9Y6W8 199 aa11.58□□□□□ -0.56
SUMO1-208ENST00000409627 A0A096LPF7 62 aa11.57□□□□□ -0.56
SUMO1-208ENST00000409627 TRBV10-1A0A0K0K1A3 114 aa11.57□□□□□ -0.56
SUMO1-208ENST00000409627 NUDT3O95989 172 aa11.57□□□□□ -0.56
SUMO1-208ENST00000409627 CAMPP49913 170 aa11.57□□□□□ -0.56
SUMO1-208ENST00000409627 LOC100131303A0A0U1RQF7 123 aa11.56□□□□□ -0.56
SUMO1-208ENST00000409627 MRPL23Q16540 153 aaKnown RBP11.56□□□□□ -0.56
SUMO1-208ENST00000409627 SUMO4Q6EEV6 95 aa11.56□□□□□ -0.56
SUMO1-208ENST00000409627 ATRAIDQ6UW56 229 aa11.56□□□□□ -0.56
SUMO1-208ENST00000409627 FRZBQ92765 325 aa11.56□□□□□ -0.56
SUMO1-208ENST00000409627 H7C1H1 209 aa11.55□□□□□ -0.56
SUMO1-208ENST00000409627 M0QY20 66 aa11.55□□□□□ -0.56
SUMO1-208ENST00000409627 RASL11AQ6T310 242 aa11.55□□□□□ -0.56
SUMO1-208ENST00000409627 URGCP-MRPS24S4R325 110 aa11.55□□□□□ -0.56
SUMO1-208ENST00000409627 P0DMU3 169 aa11.54□□□□□ -0.56
SUMO1-208ENST00000409627 FAM231AP0DMU4 169 aa11.54□□□□□ -0.56
SUMO1-208ENST00000409627 FAM231CP0DMU5 169 aa11.54□□□□□ -0.56
SUMO1-208ENST00000409627 LINC00694P0DN24 101 aa11.54□□□□□ -0.56
SUMO1-208ENST00000409627 SRIP30626 198 aa11.54□□□□□ -0.56
SUMO1-208ENST00000409627 SH2D6Q7Z4S9 175 aa11.54□□□□□ -0.56
SUMO1-208ENST00000409627 AMN1Q8IY45 258 aa11.54□□□□□ -0.56
SUMO1-208ENST00000409627 RNF185Q96GF1 192 aa11.54□□□□□ -0.56
SUMO1-208ENST00000409627 PLECQ15149 4684 aaKnown RBP11.54□□□□□ -0.56
SUMO1-208ENST00000409627 RAB4AP20338 218 aa11.53□□□□□ -0.56
SUMO1-208ENST00000409627 FAM104BQ5XKR9 115 aa11.53□□□□□ -0.56
SUMO1-208ENST00000409627 Q9UF83 564 aa11.53□□□□□ -0.56
SUMO1-208ENST00000409627 TENM2Q9NT68 2774 aa11.52□□□□□ -0.56
SUMO1-208ENST00000409627 TRBV7-3A0A075B6L6 115 aa11.52□□□□□ -0.57
SUMO1-208ENST00000409627 GAGE12JA6NER3 117 aa11.52□□□□□ -0.57
SUMO1-208ENST00000409627 RPL36AP83881 106 aaKnown RBP11.52□□□□□ -0.57
SUMO1-208ENST00000409627 GAGE1Q13065 139 aa11.52□□□□□ -0.57
SUMO1-208ENST00000409627 GAGE4Q13068 117 aa11.52□□□□□ -0.57
SUMO1-208ENST00000409627 GAGE5Q13069 117 aa11.52□□□□□ -0.57
SUMO1-208ENST00000409627 GAGE13Q4V321 117 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms