RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 HIST1H2BLQ99880 126 aa8.54□□□□□ -1.04
SNX13-202ENST00000409604 PAX4O43316 350 aa8.54□□□□□ -1.04
SNX13-202ENST00000409604 GCSHP23434 173 aa8.54□□□□□ -1.04
SNX13-202ENST00000409604 Q9HAA7 133 aa8.54□□□□□ -1.04
SNX13-202ENST00000409604 TRAV8-2A0A0B4J237 113 aa8.54□□□□□ -1.04
SNX13-202ENST00000409604 A0A1B0GW15 77 aa8.54□□□□□ -1.04
SNX13-202ENST00000409604 H3BMM0 161 aa8.54□□□□□ -1.04
SNX13-202ENST00000409604 LINC00469Q8N7U9 141 aa8.54□□□□□ -1.04
SNX13-202ENST00000409604 PYGO2Q9BRQ0 406 aa8.54□□□□□ -1.04
SNX13-202ENST00000409604 CIDEAO60543 219 aa8.53□□□□□ -1.04
SNX13-202ENST00000409604 PPBPP02775 128 aa8.53□□□□□ -1.04
SNX13-202ENST00000409604 Q6ZTI0 123 aa8.53□□□□□ -1.04
SNX13-202ENST00000409604 ATP5L2Q7Z4Y8 100 aa8.53□□□□□ -1.04
SNX13-202ENST00000409604 TMEM89A2RUT3 159 aa8.53□□□□□ -1.04
SNX13-202ENST00000409604 AMBPP02760 352 aa8.53□□□□□ -1.04
SNX13-202ENST00000409604 VAMP3Q15836 100 aa8.53□□□□□ -1.04
SNX13-202ENST00000409604 SHISA2Q6UWI4 295 aa8.53□□□□□ -1.04
SNX13-202ENST00000409604 MRAP2Q96G30 205 aa8.53□□□□□ -1.04
SNX13-202ENST00000409604 NXT2Q9NPJ8 142 aaKnown RBP8.53□□□□□ -1.04
SNX13-202ENST00000409604 HRNRQ86YZ3 2850 aaPredicted RBP8.53□□□□□ -1.04
SNX13-202ENST00000409604 LAGE3Q14657 143 aa8.53□□□□□ -1.04
SNX13-202ENST00000409604 C18orf32Q8TCD1 76 aa8.53□□□□□ -1.04
SNX13-202ENST00000409604 CRPP02741 224 aa8.52□□□□□ -1.04
SNX13-202ENST00000409604 HOXA5P20719 270 aa8.52□□□□□ -1.04
SNX13-202ENST00000409604 MALP21145 153 aa8.52□□□□□ -1.04
SNX13-202ENST00000409604 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.52□□□□□ -1.05
SNX13-202ENST00000409604 IGKV2-29A2NJV5 120 aaPredicted RBP8.52□□□□□ -1.05
SNX13-202ENST00000409604 LGALS3P17931 250 aaKnown RBP8.52□□□□□ -1.05
SNX13-202ENST00000409604 RETNQ9HD89 108 aa8.52□□□□□ -1.05
SNX13-202ENST00000409604 TP53TG1Q9Y2A0 90 aa8.52□□□□□ -1.05
SNX13-202ENST00000409604 IGLV10-54A0A075B6I4 117 aa8.52□□□□□ -1.05
SNX13-202ENST00000409604 VCYO14598 125 aa8.52□□□□□ -1.05
SNX13-202ENST00000409604 FOSL1P15407 271 aa8.52□□□□□ -1.05
SNX13-202ENST00000409604 hDV102S1A0JD36 115 aa8.52□□□□□ -1.05
SNX13-202ENST00000409604 PRR9Q5T870 116 aa8.52□□□□□ -1.05
SNX13-202ENST00000409604 M0R2P5 195 aa8.51□□□□□ -1.05
SNX13-202ENST00000409604 SPXQ9BT56 116 aa8.51□□□□□ -1.05
SNX13-202ENST00000409604 SMIM27A0A1W2PRY6 76 aa8.51□□□□□ -1.05
SNX13-202ENST00000409604 TRAV9-1A0A075B6T8 112 aa8.51□□□□□ -1.05
SNX13-202ENST00000409604 HLA-DRB4P13762 266 aa8.51□□□□□ -1.05
SNX13-202ENST00000409604 CRIP1P50238 77 aa8.51□□□□□ -1.05
SNX13-202ENST00000409604 PROK1P58294 105 aa8.51□□□□□ -1.05
SNX13-202ENST00000409604 RASL11AQ6T310 242 aa8.51□□□□□ -1.05
SNX13-202ENST00000409604 HLA-DRB4X5D2U9 266 aa8.51□□□□□ -1.05
SNX13-202ENST00000409604 ATP5LO75964 103 aa8.5□□□□□ -1.05
SNX13-202ENST00000409604 GYPEP15421 78 aa8.5□□□□□ -1.05
SNX13-202ENST00000409604 C9orf47Q6ZRZ4 202 aa8.5□□□□□ -1.05
SNX13-202ENST00000409604 FAM231DQ6ZW35 169 aa8.5□□□□□ -1.05
SNX13-202ENST00000409604 STPG4Q8N801 248 aa8.5□□□□□ -1.05
SNX13-202ENST00000409604 OR5A1Q8NGJ0 315 aa8.5□□□□□ -1.05
SNX13-202ENST00000409604 PSMB2P49721 201 aa8.5□□□□□ -1.05
SNX13-202ENST00000409604 KRTAP24-1Q3LI83 254 aa8.5□□□□□ -1.05
SNX13-202ENST00000409604 C2orf88Q9BSF0 95 aa8.5□□□□□ -1.05
SNX13-202ENST00000409604 C2orf66Q6UXQ4 117 aa8.5□□□□□ -1.05
SNX13-202ENST00000409604 HIST3H2BBQ8N257 126 aa8.5□□□□□ -1.05
SNX13-202ENST00000409604 HIST1H4GQ99525 98 aa8.5□□□□□ -1.05
SNX13-202ENST00000409604 SIGLEC8Q9NYZ4 499 aa8.5□□□□□ -1.05
SNX13-202ENST00000409604 A8MWV9 139 aa8.49□□□□□ -1.05
SNX13-202ENST00000409604 ORMDL2Q53FV1 153 aa8.49□□□□□ -1.05
SNX13-202ENST00000409604 OR13C6PQ8NH95 151 aa8.49□□□□□ -1.05
SNX13-202ENST00000409604 IGLV2-8P01709 118 aa8.49□□□□□ -1.05
SNX13-202ENST00000409604 ALKBH7Q9BT30 221 aaPredicted RBP8.49□□□□□ -1.05
SNX13-202ENST00000409604 IGLL5B9A064 214 aa8.49□□□□□ -1.05
SNX13-202ENST00000409604 PSCAO43653 123 aa8.49□□□□□ -1.05
SNX13-202ENST00000409604 ANGP03950 147 aaKnown RBP8.49□□□□□ -1.05
SNX13-202ENST00000409604 C3orf79P0CE67 100 aa8.49□□□□□ -1.05
SNX13-202ENST00000409604 FAM222AQ5U5X8 452 aa8.49□□□□□ -1.05
SNX13-202ENST00000409604 ODF3L2Q3SX64 289 aa8.48□□□□□ -1.05
SNX13-202ENST00000409604 NUPR1O60356 82 aa8.48□□□□□ -1.05
SNX13-202ENST00000409604 PAPPA-AS1Q5QFB9 102 aa8.48□□□□□ -1.05
SNX13-202ENST00000409604 C11orf21Q9P2W6 132 aa8.48□□□□□ -1.05
SNX13-202ENST00000409604 TRPT1Q86TN4 253 aaKnown RBP8.48□□□□□ -1.05
SNX13-202ENST00000409604 DCANP1Q8TF63 244 aa8.48□□□□□ -1.05
SNX13-202ENST00000409604 CHTOPQ9Y3Y2 248 aaKnown RBP8.48□□□□□ -1.05
SNX13-202ENST00000409604 LGALS9O00182 355 aa8.47□□□□□ -1.05
SNX13-202ENST00000409604 BRI3O95415 125 aa8.47□□□□□ -1.05
SNX13-202ENST00000409604 IGHV3-30P01768 117 aa8.47□□□□□ -1.05
SNX13-202ENST00000409604 IGHV3-33P01772 117 aa8.47□□□□□ -1.05
SNX13-202ENST00000409604 SPART-AS1P0CW21 52 aa8.47□□□□□ -1.05
SNX13-202ENST00000409604 IGHV3-30-3P0DP02 117 aa8.47□□□□□ -1.05
SNX13-202ENST00000409604 IGHV3-30-5P0DP03 117 aa8.47□□□□□ -1.05
SNX13-202ENST00000409604 GFRA4Q9GZZ7 299 aa8.47□□□□□ -1.05
SNX13-202ENST00000409604 RBAKDNA6NC62 111 aa8.47□□□□□ -1.05
SNX13-202ENST00000409604 DNLZQ5SXM8 178 aa8.47□□□□□ -1.05
SNX13-202ENST00000409604 SUMO4Q6EEV6 95 aa8.47□□□□□ -1.05
SNX13-202ENST00000409604 ZFAND2AQ8N6M9 145 aa8.47□□□□□ -1.05
SNX13-202ENST00000409604 APOMO95445 188 aa8.47□□□□□ -1.05
SNX13-202ENST00000409604 SMIM6P0DI80 62 aa8.47□□□□□ -1.05
SNX13-202ENST00000409604 CTAG1AP78358 180 aa8.47□□□□□ -1.05
SNX13-202ENST00000409604 CEMP1Q6PRD7 247 aaPredicted RBP8.47□□□□□ -1.05
SNX13-202ENST00000409604 RPL39P62891 51 aaKnown RBP8.46□□□□□ -1.05
SNX13-202ENST00000409604 CT83Q5H943 113 aa8.46□□□□□ -1.05
SNX13-202ENST00000409604 ZC2HC1BQ5TFG8 222 aa8.46□□□□□ -1.05
SNX13-202ENST00000409604 LINC00173Q6ZV60 143 aa8.46□□□□□ -1.05
SNX13-202ENST00000409604 ZNF479Q96JC4 524 aa8.46□□□□□ -1.05
SNX13-202ENST00000409604 C10orf91Q5T1B1 145 aa8.46□□□□□ -1.06
SNX13-202ENST00000409604 SLC25A34Q6PIV7 304 aa8.46□□□□□ -1.06
SNX13-202ENST00000409604 SMIM12Q96EX1 92 aa8.46□□□□□ -1.06
SNX13-202ENST00000409604 TRAV25A0A0B4J276 109 aa8.46□□□□□ -1.06
SNX13-202ENST00000409604 LOC107984156A0A0G2JMH3 177 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms