RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 DKK2Q9UBU2 259 aa12.67□□□□□ -0.38
CBX6-202ENST00000407418 USF3Q68DE3 2245 aa12.67□□□□□ -0.38
CBX6-202ENST00000407418 ODF3BA8MYP8 253 aa12.67□□□□□ -0.38
CBX6-202ENST00000407418 RBM3P98179 157 aaKnown RBP12.67□□□□□ -0.38
CBX6-202ENST00000407418 COX7B2Q8TF08 81 aa12.67□□□□□ -0.38
CBX6-202ENST00000407418 VSIG2Q96IQ7 327 aa12.67□□□□□ -0.38
CBX6-202ENST00000407418 LYRM9A8MSI8 78 aa12.66□□□□□ -0.38
CBX6-202ENST00000407418 KLK12Q9UKR0 248 aa12.66□□□□□ -0.38
CBX6-202ENST00000407418 B9D2Q9BPU9 175 aa12.66□□□□□ -0.38
CBX6-202ENST00000407418 NTN5Q8WTR8 489 aaPredicted RBP12.66□□□□□ -0.38
CBX6-202ENST00000407418 TP53BP1Q12888 1972 aaPredicted RBP12.66□□□□□ -0.38
CBX6-202ENST00000407418 LGALS9O00182 355 aa12.65□□□□□ -0.38
CBX6-202ENST00000407418 RS1O15537 224 aa12.65□□□□□ -0.38
CBX6-202ENST00000407418 IGKV1-17P01599 117 aa12.65□□□□□ -0.38
CBX6-202ENST00000407418 MED14OSP0DP75 135 aa12.65□□□□□ -0.38
CBX6-202ENST00000407418 IGHV4-4A0A075B6R2 117 aa12.65□□□□□ -0.38
CBX6-202ENST00000407418 ZNF407Q9C0G0 2248 aa12.65□□□□□ -0.38
CBX6-202ENST00000407418 DEFB131BA0A096LNP1 70 aa12.65□□□□□ -0.39
CBX6-202ENST00000407418 PRSS47A8MTI9 375 aa12.65□□□□□ -0.39
CBX6-202ENST00000407418 FUSP35637 526 aaKnown RBP eCLIP12.65□□□□□ -0.39
CBX6-202ENST00000407418 CEP250Q9BV73 2442 aa12.64□□□□□ -0.39
CBX6-202ENST00000407418 B5MCH6 92 aa12.64□□□□□ -0.39
CBX6-202ENST00000407418 NDUFB1O75438 58 aa12.64□□□□□ -0.39
CBX6-202ENST00000407418 GVINP1Q7Z2Y8 2422 aa12.63□□□□□ -0.39
CBX6-202ENST00000407418 H3BQ85 93 aa12.63□□□□□ -0.39
CBX6-202ENST00000407418 K7EN84 100 aa12.63□□□□□ -0.39
CBX6-202ENST00000407418 ORMDL1Q9P0S3 153 aa12.63□□□□□ -0.39
CBX6-202ENST00000407418 TRBV12-3P01733 135 aa12.63□□□□□ -0.39
CBX6-202ENST00000407418 KIAA2026Q5HYC2 2103 aa12.62□□□□□ -0.39
CBX6-202ENST00000407418 CCL25O15444 150 aa12.62□□□□□ -0.39
CBX6-202ENST00000407418 WISP2O76076 250 aa12.62□□□□□ -0.39
CBX6-202ENST00000407418 FSTL3O95633 263 aa12.62□□□□□ -0.39
CBX6-202ENST00000407418 RIF1Q5UIP0 2472 aaKnown RBP12.62□□□□□ -0.39
CBX6-202ENST00000407418 Q6ZSV7 163 aa12.62□□□□□ -0.39
CBX6-202ENST00000407418 DOCK7Q96N67 2140 aa12.62□□□□□ -0.39
CBX6-202ENST00000407418 A0A0J9YX75 114 aa12.62□□□□□ -0.39
CBX6-202ENST00000407418 SPAG11BQ08648 103 aa12.62□□□□□ -0.39
CBX6-202ENST00000407418 RPL39LQ96EH5 51 aaKnown RBP12.61□□□□□ -0.39
CBX6-202ENST00000407418 C5orf47Q569G3 176 aa12.61□□□□□ -0.39
CBX6-202ENST00000407418 Q6ZVH6 145 aa12.61□□□□□ -0.39
CBX6-202ENST00000407418 BAALC-AS2P0C853 105 aa12.61□□□□□ -0.39
CBX6-202ENST00000407418 CDPF1Q6NVV7 123 aa12.61□□□□□ -0.39
CBX6-202ENST00000407418 CRYGDP07320 174 aa12.6□□□□□ -0.39
CBX6-202ENST00000407418 ODF3L1Q8IXM7 274 aa12.6□□□□□ -0.39
CBX6-202ENST00000407418 CFC1BP0CG36 223 aa12.6□□□□□ -0.39
CBX6-202ENST00000407418 CFC1P0CG37 223 aa12.6□□□□□ -0.39
CBX6-202ENST00000407418 AKAP6Q13023 2319 aa12.6□□□□□ -0.39
CBX6-202ENST00000407418 TRAV26-1A0A087WT03 109 aa12.6□□□□□ -0.39
CBX6-202ENST00000407418 UNQ9165/PRO28630Q6UXU0 137 aa12.6□□□□□ -0.39
CBX6-202ENST00000407418 TRAV10A0A0B4J240 114 aa12.6□□□□□ -0.39
CBX6-202ENST00000407418 ZFP2Q6ZN57 461 aa12.6□□□□□ -0.39
CBX6-202ENST00000407418 IGF1P05019 195 aa12.59□□□□□ -0.39
CBX6-202ENST00000407418 MIFP14174 115 aa12.59□□□□□ -0.39
CBX6-202ENST00000407418 KMT2EQ8IZD2 1858 aa12.59□□□□□ -0.39
CBX6-202ENST00000407418 IL15RAQ13261 267 aa12.59□□□□□ -0.39
CBX6-202ENST00000407418 MSMPQ1L6U9 139 aa12.59□□□□□ -0.39
CBX6-202ENST00000407418 C11orf71Q6IPW1 123 aa12.58□□□□□ -0.4
CBX6-202ENST00000407418 GTSF1Q8WW33 167 aa12.58□□□□□ -0.4
CBX6-202ENST00000407418 GPR179Q6PRD1 2367 aa12.58□□□□□ -0.4
CBX6-202ENST00000407418 NCR3O14931 201 aa12.58□□□□□ -0.4
CBX6-202ENST00000407418 DEFB114Q30KQ6 69 aa12.58□□□□□ -0.4
CBX6-202ENST00000407418 NFE4Q86UQ8 179 aa12.58□□□□□ -0.4
CBX6-202ENST00000407418 ACYP1P07311 99 aa12.58□□□□□ -0.4
CBX6-202ENST00000407418 FAM110AQ9BQ89 295 aa12.58□□□□□ -0.4
CBX6-202ENST00000407418 TECTAO75443 2155 aa12.57□□□□□ -0.4
CBX6-202ENST00000407418 PROP1O75360 226 aa12.57□□□□□ -0.4
CBX6-202ENST00000407418 FAM222AQ5U5X8 452 aa12.57□□□□□ -0.4
CBX6-202ENST00000407418 PRAC2D3DTV9 90 aa12.57□□□□□ -0.4
CBX6-202ENST00000407418 TRBV10-1A0A0K0K1A3 114 aa12.56□□□□□ -0.4
CBX6-202ENST00000407418 LINC01545Q5VT33 79 aa12.56□□□□□ -0.4
CBX6-202ENST00000407418 PCP2Q8IVA1 136 aa12.56□□□□□ -0.4
CBX6-202ENST00000407418 NDUFC2O95298 119 aa12.56□□□□□ -0.4
CBX6-202ENST00000407418 KIR2DL5BQ8NHK3 375 aa12.56□□□□□ -0.4
CBX6-202ENST00000407418 DENND4CQ5VZ89 1909 aa12.56□□□□□ -0.4
CBX6-202ENST00000407418 ZNF747Q9BV97 191 aa12.56□□□□□ -0.4
CBX6-202ENST00000407418 C7orf33Q8WU49 177 aa12.56□□□□□ -0.4
CBX6-202ENST00000407418 ODF3Q96PU9 254 aa12.55□□□□□ -0.4
CBX6-202ENST00000407418 PATE2Q6UY27 113 aa12.55□□□□□ -0.4
CBX6-202ENST00000407418 SND1-IT1Q9HBX3 110 aa12.55□□□□□ -0.4
CBX6-202ENST00000407418 KIR2DL5BA0A0G2JN68 375 aa12.55□□□□□ -0.4
CBX6-202ENST00000407418 KIR2DL5BA0A0G2JPC4 375 aa12.55□□□□□ -0.4
CBX6-202ENST00000407418 KIR2DL5AQ8N109 375 aa12.55□□□□□ -0.4
CBX6-202ENST00000407418 POLEQ07864 2286 aa12.55□□□□□ -0.4
CBX6-202ENST00000407418 CCDC140Q96MF4 163 aa12.54□□□□□ -0.4
CBX6-202ENST00000407418 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.54□□□□□ -0.4
CBX6-202ENST00000407418 ARFGEF3Q5TH69 2177 aa12.54□□□□□ -0.4
CBX6-202ENST00000407418 IGKV2-24A0A0C4DH68 120 aa12.53□□□□□ -0.4
CBX6-202ENST00000407418 GATA1P15976 413 aaPredicted RBP12.53□□□□□ -0.4
CBX6-202ENST00000407418 LY6G6CO95867 125 aa12.53□□□□□ -0.4
CBX6-202ENST00000407418 PLXNB3Q9ULL4 1909 aa12.53□□□□□ -0.4
CBX6-202ENST00000407418 HEATR5AQ86XA9 2040 aa12.53□□□□□ -0.4
CBX6-202ENST00000407418 ZGRF1Q86YA3 2104 aa12.52□□□□□ -0.4
CBX6-202ENST00000407418 OPRPNQ99935 248 aaPredicted RBP12.52□□□□□ -0.4
CBX6-202ENST00000407418 A0A0B4J2C4 111 aa12.52□□□□□ -0.41
CBX6-202ENST00000407418 LINC01548A6NM66 108 aa12.51□□□□□ -0.41
CBX6-202ENST00000407418 SMIM20Q8N5G0 67 aa12.51□□□□□ -0.41
CBX6-202ENST00000407418 PSMG3-AS1Q96PY0 264 aa12.51□□□□□ -0.41
CBX6-202ENST00000407418 SPTBN1Q01082 2364 aaKnown RBP12.51□□□□□ -0.41
CBX6-202ENST00000407418 H0YGX0 51 aa12.51□□□□□ -0.41
CBX6-202ENST00000407418 DIRC1Q969H9 104 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms