RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 IGLV1-40P01703 118 aa3.6□□□□□ -1.83
PCDH11X-207ENST00000406881 PSMB8P28062 276 aa3.6□□□□□ -1.83
PCDH11X-207ENST00000406881 RBX1P62877 108 aa3.6□□□□□ -1.83
PCDH11X-207ENST00000406881 SUMO4Q6EEV6 95 aa3.6□□□□□ -1.83
PCDH11X-207ENST00000406881 LINC00322Q6ZN03 302 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-207ENST00000406881 TMEM61Q8N0U2 210 aa3.6□□□□□ -1.83
PCDH11X-207ENST00000406881 TRAV12-1A0A0B4J245 112 aa3.6□□□□□ -1.83
PCDH11X-207ENST00000406881 K7EP13 123 aa3.6□□□□□ -1.83
PCDH11X-207ENST00000406881 KIR3DS1Q14943 382 aa3.6□□□□□ -1.83
PCDH11X-207ENST00000406881 SMAD5-AS1Q9Y6J3 95 aa3.6□□□□□ -1.83
PCDH11X-207ENST00000406881 HCFC1P51610 2035 aa3.6□□□□□ -1.83
PCDH11X-207ENST00000406881 IGKV3D-20A0A0C4DH25 116 aa3.6□□□□□ -1.83
PCDH11X-207ENST00000406881 A0A1W2PPR1 153 aa3.6□□□□□ -1.83
PCDH11X-207ENST00000406881 PRSS29PA6NIE9 313 aa3.6□□□□□ -1.83
PCDH11X-207ENST00000406881 ZNF80P51504 273 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-207ENST00000406881 Q8N1Y9 231 aa3.6□□□□□ -1.83
PCDH11X-207ENST00000406881 TRAV13-1A0A0B4J241 112 aa3.59□□□□□ -1.83
PCDH11X-207ENST00000406881 IGHV3-16A0A0C4DH30 117 aa3.59□□□□□ -1.83
PCDH11X-207ENST00000406881 IGLV2-11P01706 119 aa3.59□□□□□ -1.83
PCDH11X-207ENST00000406881 LINC00158P58513 81 aa3.59□□□□□ -1.83
PCDH11X-207ENST00000406881 HERVK_113P63121 156 aa3.59□□□□□ -1.83
PCDH11X-207ENST00000406881 SPATA12Q7Z6I5 190 aa3.59□□□□□ -1.83
PCDH11X-207ENST00000406881 WFDC11Q8NEX6 87 aa3.59□□□□□ -1.83
PCDH11X-207ENST00000406881 IGHV3-64A0A075B6Q5 118 aa3.59□□□□□ -1.83
PCDH11X-207ENST00000406881 SPINK8P0C7L1 97 aa3.59□□□□□ -1.83
PCDH11X-207ENST00000406881 GATA1P15976 413 aaPredicted RBP3.59□□□□□ -1.83
PCDH11X-207ENST00000406881 NDUFA11Q86Y39 141 aa3.59□□□□□ -1.83
PCDH11X-207ENST00000406881 APRG1Q8IVJ8 170 aa3.59□□□□□ -1.83
PCDH11X-207ENST00000406881 DLX4Q92988 240 aaPredicted RBP3.59□□□□□ -1.83
PCDH11X-207ENST00000406881 TIMM17AQ99595 171 aa3.59□□□□□ -1.83
PCDH11X-207ENST00000406881 CITED2Q99967 270 aaPredicted RBP3.59□□□□□ -1.83
PCDH11X-207ENST00000406881 ZNF702PQ9H963 129 aa3.59□□□□□ -1.83
PCDH11X-207ENST00000406881 CSPG4Q6UVK1 2322 aa3.59□□□□□ -1.83
PCDH11X-207ENST00000406881 FRMD6-AS1P0C7T7 363 aa3.59□□□□□ -1.84
PCDH11X-207ENST00000406881 C6orf226Q5I0X4 101 aa3.59□□□□□ -1.84
PCDH11X-207ENST00000406881 ZFAND6Q6FIF0 208 aa3.59□□□□□ -1.84
PCDH11X-207ENST00000406881 ZFP2Q6ZN57 461 aa3.59□□□□□ -1.84
PCDH11X-207ENST00000406881 Q6ZSV7 163 aa3.59□□□□□ -1.84
PCDH11X-207ENST00000406881 PRIMA1Q86XR5 153 aa3.59□□□□□ -1.84
PCDH11X-207ENST00000406881 MAP6D1Q9H9H5 199 aa3.59□□□□□ -1.84
PCDH11X-207ENST00000406881 DKK2Q9UBU2 259 aa3.59□□□□□ -1.84
PCDH11X-207ENST00000406881 GOLGB1Q14789 3259 aaKnown RBP3.59□□□□□ -1.84
PCDH11X-207ENST00000406881 TRAV8-2A0A0B4J237 113 aa3.59□□□□□ -1.84
PCDH11X-207ENST00000406881 F5H768 121 aa3.59□□□□□ -1.84
PCDH11X-207ENST00000406881 DAZ2Q13117 558 aaKnown RBP3.59□□□□□ -1.84
PCDH11X-207ENST00000406881 DEFB114Q30KQ6 69 aa3.59□□□□□ -1.84
PCDH11X-207ENST00000406881 SH2D6Q7Z4S9 175 aa3.59□□□□□ -1.84
PCDH11X-207ENST00000406881 DAZ4Q86SG3 579 aaKnown RBP3.59□□□□□ -1.84
PCDH11X-207ENST00000406881 OVOL2Q9BRP0 275 aa3.59□□□□□ -1.84
PCDH11X-207ENST00000406881 DAZ3Q9NR90 486 aaKnown RBP3.59□□□□□ -1.84
PCDH11X-207ENST00000406881 TRAV26-1A0A087WT03 109 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 TRBV10-1A0A0K0K1A3 114 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 J3QQQ9 107 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 MRPS12O15235 138 aaKnown RBP3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 RNASE1P07998 156 aaKnown RBP3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 GAGE2BQ13066 116 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 GAGE2EQ4V326 116 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 GDF5OSQ5U4N7 250 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 ADAMTSL5Q6ZMM2 481 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 Q71RC1 249 aaPredicted RBP3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 ZFAND2AQ8N6M9 145 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 PCSK5Q92824 1860 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 RPL39LQ96EH5 51 aaKnown RBP3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 CLUHP3Q96NS8 147 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 NOP10Q9NPE3 64 aaKnown RBP3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 GAGE2DQ9UEU5 116 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 SS18L2Q9UHA2 77 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 GAGE12HA6NDE8 117 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 H3BMM0 161 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 CRIP1P50238 77 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 CFHR3Q02985 330 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 SFTA2Q6UW10 78 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 TOMM6Q96B49 74 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 POLQO75417 2590 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 LEPROTO15243 131 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 PAX4O43316 350 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 CRYBA4P53673 196 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 ATXN8Q156A1 80 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 DEFB104AQ8WTQ1 72 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 NDUFA12Q9UI09 145 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 U3KQK5 164 aa3.58□□□□□ -1.84
PCDH11X-207ENST00000406881 C9orf118A6NHY6 69 aa3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 K7EQD1 137 aa3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 BVES-AS1Q5T3Y7 98 aa3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 COX8CQ7Z4L0 72 aa3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 GATD1Q8NB37 220 aa3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 TMEM263Q8WUH6 116 aaKnown RBP3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 C20orf173Q96LM9 149 aa3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 PIEZO2Q9H5I5 2752 aa3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 TRBV20-1A0A075B6N2 111 aa3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 IGHV3-38A0A0C4DH36 116 aa3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 SCGB1A1P11684 91 aa3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 PLA2G2AP14555 144 aa3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 TDRG1Q3Y452 100 aa3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 LINC00173Q6ZV60 143 aa3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 SMIM20Q8N5G0 67 aa3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 HIGD1BQ9P298 99 aa3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 IGHV4-4A0A075B6R2 117 aa3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 SLC25A20O43772 301 aa3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 SPART-AS1P0CW21 52 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms