RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 TMEM89A2RUT3 159 aa12.85□□□□□ -0.35
TSC2-204ENST00000401874 ADORA2A-AS1P86434 159 aa12.85□□□□□ -0.35
TSC2-204ENST00000401874 CLPSL2Q6UWE3 100 aa12.85□□□□□ -0.35
TSC2-204ENST00000401874 TMEM131Q92545 1883 aa12.85□□□□□ -0.35
TSC2-204ENST00000401874 IGHV4-30-2A0A087WSY4 118 aa12.85□□□□□ -0.35
TSC2-204ENST00000401874 GPHB5Q86YW7 130 aa12.85□□□□□ -0.35
TSC2-204ENST00000401874 YPEL4Q96NS1 127 aa12.85□□□□□ -0.35
TSC2-204ENST00000401874 WFDC2Q14508 124 aa12.84□□□□□ -0.35
TSC2-204ENST00000401874 SIRPDQ9H106 197 aa12.84□□□□□ -0.35
TSC2-204ENST00000401874 ARFGEF3Q5TH69 2177 aa12.84□□□□□ -0.35
TSC2-204ENST00000401874 ZFP36P26651 326 aaKnown RBP12.84□□□□□ -0.35
TSC2-204ENST00000401874 C2orf16Q68DN1 1984 aa12.84□□□□□ -0.35
TSC2-204ENST00000401874 DENND4AQ7Z401 1863 aa12.83□□□□□ -0.36
TSC2-204ENST00000401874 PIFOQ8TCI5 191 aa12.83□□□□□ -0.36
TSC2-204ENST00000401874 CITED2Q99967 270 aaPredicted RBP12.83□□□□□ -0.36
TSC2-204ENST00000401874 IGHG2P01859 326 aa12.82□□□□□ -0.36
TSC2-204ENST00000401874 MLST8Q9BVC4 326 aa12.82□□□□□ -0.36
TSC2-204ENST00000401874 FBXL19-AS1Q494R0 122 aa12.82□□□□□ -0.36
TSC2-204ENST00000401874 MED13Q9UHV7 2174 aa12.82□□□□□ -0.36
TSC2-204ENST00000401874 SND1-IT1Q9HBX3 110 aa12.82□□□□□ -0.36
TSC2-204ENST00000401874 FOXI1Q12951 378 aa12.82□□□□□ -0.36
TSC2-204ENST00000401874 ATP6V0E2Q8NHE4 81 aa12.82□□□□□ -0.36
TSC2-204ENST00000401874 GDF5OSQ5U4N7 250 aa12.81□□□□□ -0.36
TSC2-204ENST00000401874 LINC00322Q6ZN03 302 aaPredicted RBP12.81□□□□□ -0.36
TSC2-204ENST00000401874 DAZAP2Q15038 168 aaPredicted RBP12.81□□□□□ -0.36
TSC2-204ENST00000401874 C5orf38Q86SI9 138 aa12.81□□□□□ -0.36
TSC2-204ENST00000401874 IGHV4OR15-8A0A075B7B6 117 aa12.81□□□□□ -0.36
TSC2-204ENST00000401874 A0A087WW49 117 aa12.81□□□□□ -0.36
TSC2-204ENST00000401874 TRAV4A0A0B4J268 109 aa12.81□□□□□ -0.36
TSC2-204ENST00000401874 MBD6Q96DN6 1003 aa12.81□□□□□ -0.36
TSC2-204ENST00000401874 COX7B2Q8TF08 81 aa12.81□□□□□ -0.36
TSC2-204ENST00000401874 G3V4G9 280 aa12.8□□□□□ -0.36
TSC2-204ENST00000401874 A0A0B4J2C4 111 aa12.79□□□□□ -0.36
TSC2-204ENST00000401874 CACNA1BQ00975 2339 aa12.79□□□□□ -0.36
TSC2-204ENST00000401874 PLA2G5P39877 138 aa12.79□□□□□ -0.36
TSC2-204ENST00000401874 LOXL1Q08397 574 aaPredicted RBP12.79□□□□□ -0.36
TSC2-204ENST00000401874 TRBV7-3A0A075B6L6 115 aa12.79□□□□□ -0.36
TSC2-204ENST00000401874 A0A0J9YY99 117 aa12.79□□□□□ -0.36
TSC2-204ENST00000401874 ODF3BA8MYP8 253 aa12.79□□□□□ -0.36
TSC2-204ENST00000401874 B5MCH6 92 aa12.79□□□□□ -0.36
TSC2-204ENST00000401874 Q6ZQT7 251 aa12.79□□□□□ -0.36
TSC2-204ENST00000401874 WISP2O76076 250 aa12.78□□□□□ -0.36
TSC2-204ENST00000401874 IGLC6P0CF74 106 aa12.78□□□□□ -0.36
TSC2-204ENST00000401874 ABCA1O95477 2261 aa12.78□□□□□ -0.36
TSC2-204ENST00000401874 TRBV10-2A0A0K0K1G8 114 aa12.78□□□□□ -0.36
TSC2-204ENST00000401874 DEFB113Q30KQ7 82 aa12.78□□□□□ -0.36
TSC2-204ENST00000401874 ZNF80P51504 273 aaPredicted RBP12.78□□□□□ -0.36
TSC2-204ENST00000401874 ALPK3Q96L96 1907 aa12.78□□□□□ -0.36
TSC2-204ENST00000401874 C20orf203Q8NBC4 194 aa12.78□□□□□ -0.36
TSC2-204ENST00000401874 VSIG2Q96IQ7 327 aa12.78□□□□□ -0.36
TSC2-204ENST00000401874 CACNA1HO95180 2353 aa12.77□□□□□ -0.36
TSC2-204ENST00000401874 H3BT86 120 aa12.77□□□□□ -0.36
TSC2-204ENST00000401874 C1orf229Q6ZS94 237 aaPredicted RBP12.77□□□□□ -0.36
TSC2-204ENST00000401874 GYPEP15421 78 aa12.77□□□□□ -0.37
TSC2-204ENST00000401874 CACNA1GO43497 2377 aa12.77□□□□□ -0.37
TSC2-204ENST00000401874 IGHV1-58A0A0C4DH39 117 aa12.76□□□□□ -0.37
TSC2-204ENST00000401874 SPTAN1Q13813 2472 aaKnown RBP12.76□□□□□ -0.37
TSC2-204ENST00000401874 UNQ9165/PRO28630Q6UXU0 137 aa12.76□□□□□ -0.37
TSC2-204ENST00000401874 A0A0J9YX75 114 aa12.76□□□□□ -0.37
TSC2-204ENST00000401874 CCDC140Q96MF4 163 aa12.75□□□□□ -0.37
TSC2-204ENST00000401874 COX7A2LO14548 114 aa12.75□□□□□ -0.37
TSC2-204ENST00000401874 A6NDX4 124 aa12.74□□□□□ -0.37
TSC2-204ENST00000401874 H3BQ85 93 aa12.74□□□□□ -0.37
TSC2-204ENST00000401874 LGALS9O00182 355 aa12.74□□□□□ -0.37
TSC2-204ENST00000401874 NDUFA11Q86Y39 141 aa12.74□□□□□ -0.37
TSC2-204ENST00000401874 HIST2H2BCQ6DN03 193 aa12.74□□□□□ -0.37
TSC2-204ENST00000401874 Q71RC1 249 aaPredicted RBP12.74□□□□□ -0.37
TSC2-204ENST00000401874 FSTL3O95633 263 aa12.74□□□□□ -0.37
TSC2-204ENST00000401874 DEFB1P60022 68 aa12.74□□□□□ -0.37
TSC2-204ENST00000401874 C9orf66Q5T8R8 295 aa12.74□□□□□ -0.37
TSC2-204ENST00000401874 RS1O15537 224 aa12.74□□□□□ -0.37
TSC2-204ENST00000401874 MRPL23Q16540 153 aaKnown RBP12.74□□□□□ -0.37
TSC2-204ENST00000401874 J3QKU1 62 aa12.73□□□□□ -0.37
TSC2-204ENST00000401874 CRYGBP07316 175 aa12.73□□□□□ -0.37
TSC2-204ENST00000401874 SS18L2Q9UHA2 77 aa12.73□□□□□ -0.37
TSC2-204ENST00000401874 ABCA4P78363 2273 aa12.73□□□□□ -0.37
TSC2-204ENST00000401874 DAND5Q8N907 189 aa12.73□□□□□ -0.37
TSC2-204ENST00000401874 MDFICQ9P1T7 246 aa12.73□□□□□ -0.37
TSC2-204ENST00000401874 PCNX1Q96RV3 2341 aa12.73□□□□□ -0.37
TSC2-204ENST00000401874 ATOX1O00244 68 aa12.73□□□□□ -0.37
TSC2-204ENST00000401874 TRBV12-3P01733 135 aa12.73□□□□□ -0.37
TSC2-204ENST00000401874 C4orf3Q8WVX3 66 aa12.72□□□□□ -0.37
TSC2-204ENST00000401874 OPRPNQ99935 248 aaPredicted RBP12.72□□□□□ -0.37
TSC2-204ENST00000401874 TP53TG3Q9ULZ0 132 aa12.72□□□□□ -0.37
TSC2-204ENST00000401874 ADAMTS9Q9P2N4 1935 aa12.72□□□□□ -0.37
TSC2-204ENST00000401874 IGKV2D-24A0A075B6R9 120 aa12.72□□□□□ -0.37
TSC2-204ENST00000401874 ATP5G1P05496 136 aa12.72□□□□□ -0.37
TSC2-204ENST00000401874 ODF3Q96PU9 254 aa12.72□□□□□ -0.37
TSC2-204ENST00000401874 NCOA6Q14686 2063 aaPredicted RBP12.72□□□□□ -0.37
TSC2-204ENST00000401874 Q8NA96 180 aa12.72□□□□□ -0.37
TSC2-204ENST00000401874 DOPEY2Q9Y3R5 2298 aa12.71□□□□□ -0.37
TSC2-204ENST00000401874 NBASA2RRP1 2371 aa12.71□□□□□ -0.37
TSC2-204ENST00000401874 IGHV3-30-3P0DP02 117 aa12.71□□□□□ -0.38
TSC2-204ENST00000401874 C1orf43Q9BWL3 253 aa12.7□□□□□ -0.38
TSC2-204ENST00000401874 CXCL5P42830 114 aa12.7□□□□□ -0.38
TSC2-204ENST00000401874 ZGRF1Q86YA3 2104 aa12.7□□□□□ -0.38
TSC2-204ENST00000401874 MYCNOSP40205 109 aa12.7□□□□□ -0.38
TSC2-204ENST00000401874 SPART-AS1P0CW21 52 aa12.69□□□□□ -0.38
TSC2-204ENST00000401874 CLEC2BQ92478 149 aa12.69□□□□□ -0.38
TSC2-204ENST00000401874 CAMK2N2Q96S95 79 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms