RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 A0A1B0GWB2 263 aa9.56□□□□□ -0.88
PPP4R1-202ENST00000400555 PLNP26678 52 aa9.56□□□□□ -0.88
PPP4R1-202ENST00000400555 C12orf74Q32Q52 190 aa9.56□□□□□ -0.88
PPP4R1-202ENST00000400555 MDFICQ9P1T7 246 aa9.56□□□□□ -0.88
PPP4R1-202ENST00000400555 PSMB2P49721 201 aa9.56□□□□□ -0.88
PPP4R1-202ENST00000400555 BEX4Q9NWD9 120 aaPredicted RBP9.56□□□□□ -0.88
PPP4R1-202ENST00000400555 PGPEP1Q9NXJ5 209 aa9.56□□□□□ -0.88
PPP4R1-202ENST00000400555 SDHAF1A6NFY7 115 aa9.56□□□□□ -0.88
PPP4R1-202ENST00000400555 SMAGPQ0VAQ4 97 aa9.56□□□□□ -0.88
PPP4R1-202ENST00000400555 MRAP2Q96G30 205 aa9.56□□□□□ -0.88
PPP4R1-202ENST00000400555 CNFNQ9BYD5 112 aa9.56□□□□□ -0.88
PPP4R1-202ENST00000400555 DEFB112Q30KQ8 113 aa9.56□□□□□ -0.88
PPP4R1-202ENST00000400555 GPHB5Q86YW7 130 aa9.56□□□□□ -0.88
PPP4R1-202ENST00000400555 SIVA1O15304 175 aa9.55□□□□□ -0.88
PPP4R1-202ENST00000400555 ZFHX3Q15911 3703 aa9.55□□□□□ -0.88
PPP4R1-202ENST00000400555 PRB1P04280 392 aa9.55□□□□□ -0.88
PPP4R1-202ENST00000400555 PRSS2P07478 247 aa9.55□□□□□ -0.88
PPP4R1-202ENST00000400555 IGLV2-18A0A075B6J9 118 aa9.55□□□□□ -0.88
PPP4R1-202ENST00000400555 LINC01549A6NIU2 74 aa9.55□□□□□ -0.88
PPP4R1-202ENST00000400555 ADARB2-AS1A8MUL3 147 aa9.55□□□□□ -0.88
PPP4R1-202ENST00000400555 Q1RN00 199 aa9.55□□□□□ -0.88
PPP4R1-202ENST00000400555 TMEM190Q8WZ59 177 aa9.55□□□□□ -0.88
PPP4R1-202ENST00000400555 USMG5Q96IX5 58 aa9.55□□□□□ -0.88
PPP4R1-202ENST00000400555 TEX15Q9BXT5 2789 aa9.54□□□□□ -0.88
PPP4R1-202ENST00000400555 MYMXA0A1B0GTQ4 84 aa9.54□□□□□ -0.88
PPP4R1-202ENST00000400555 HOXA3O43365 443 aaPredicted RBP9.54□□□□□ -0.88
PPP4R1-202ENST00000400555 SNRPD3P62318 126 aaKnown RBP9.54□□□□□ -0.88
PPP4R1-202ENST00000400555 OR5A1Q8NGJ0 315 aa9.54□□□□□ -0.88
PPP4R1-202ENST00000400555 BAALCQ8WXS3 180 aa9.54□□□□□ -0.88
PPP4R1-202ENST00000400555 COX8CQ7Z4L0 72 aa9.54□□□□□ -0.88
PPP4R1-202ENST00000400555 PLEKHB2Q96CS7 222 aa9.54□□□□□ -0.88
PPP4R1-202ENST00000400555 VPS13CQ709C8 3753 aa9.54□□□□□ -0.88
PPP4R1-202ENST00000400555 IGLL5B9A064 214 aa9.54□□□□□ -0.88
PPP4R1-202ENST00000400555 RNASE3P12724 160 aaKnown RBP9.54□□□□□ -0.88
PPP4R1-202ENST00000400555 ZNF876PQ49A33 203 aa9.54□□□□□ -0.88
PPP4R1-202ENST00000400555 HERVK_113P61574 105 aa9.53□□□□□ -0.88
PPP4R1-202ENST00000400555 NPC2P61916 151 aa9.53□□□□□ -0.88
PPP4R1-202ENST00000400555 SUMO4Q6EEV6 95 aa9.53□□□□□ -0.88
PPP4R1-202ENST00000400555 C10orf105Q8TEF2 133 aa9.53□□□□□ -0.88
PPP4R1-202ENST00000400555 MUC4Q99102 2169 aa9.53□□□□□ -0.88
PPP4R1-202ENST00000400555 U3KQE9 123 aa9.53□□□□□ -0.88
PPP4R1-202ENST00000400555 C11orf86A6NJI1 115 aa9.52□□□□□ -0.89
PPP4R1-202ENST00000400555 IGHG2P01859 326 aa9.52□□□□□ -0.89
PPP4R1-202ENST00000400555 RAX2Q96IS3 184 aa9.52□□□□□ -0.89
PPP4R1-202ENST00000400555 RNF223E7ERA6 249 aa9.52□□□□□ -0.89
PPP4R1-202ENST00000400555 GAGE13Q4V321 117 aa9.52□□□□□ -0.89
PPP4R1-202ENST00000400555 MRPL53Q96EL3 112 aaKnown RBP9.52□□□□□ -0.89
PPP4R1-202ENST00000400555 CSMD2Q7Z408 3487 aa9.52□□□□□ -0.89
PPP4R1-202ENST00000400555 CHD6Q8TD26 2715 aa9.51□□□□□ -0.89
PPP4R1-202ENST00000400555 TRAV2A0A0B4J234 112 aa9.51□□□□□ -0.89
PPP4R1-202ENST00000400555 A0A1W2PRX2 142 aa9.51□□□□□ -0.89
PPP4R1-202ENST00000400555 B4DSR2 109 aa9.51□□□□□ -0.89
PPP4R1-202ENST00000400555 LGALS3P17931 250 aaKnown RBP9.51□□□□□ -0.89
PPP4R1-202ENST00000400555 P0DMU3 169 aa9.51□□□□□ -0.89
PPP4R1-202ENST00000400555 FAM231AP0DMU4 169 aa9.51□□□□□ -0.89
PPP4R1-202ENST00000400555 FAM231CP0DMU5 169 aa9.51□□□□□ -0.89
PPP4R1-202ENST00000400555 FBN2P35556 2912 aa9.51□□□□□ -0.89
PPP4R1-202ENST00000400555 SRSF2Q01130 221 aaKnown RBP9.51□□□□□ -0.89
PPP4R1-202ENST00000400555 UFSP1Q6NVU6 142 aa9.51□□□□□ -0.89
PPP4R1-202ENST00000400555 Q8N1Y9 231 aa9.51□□□□□ -0.89
PPP4R1-202ENST00000400555 TSSC4Q9Y5U2 329 aaPredicted RBP9.51□□□□□ -0.89
PPP4R1-202ENST00000400555 IGHV3-16A0A0C4DH30 117 aa9.51□□□□□ -0.89
PPP4R1-202ENST00000400555 NF1P21359 2839 aa9.51□□□□□ -0.89
PPP4R1-202ENST00000400555 A0A0U1RRA0 63 aa9.5□□□□□ -0.89
PPP4R1-202ENST00000400555 LGALS1P09382 135 aaKnown RBP9.5□□□□□ -0.89
PPP4R1-202ENST00000400555 VCYO14598 125 aa9.5□□□□□ -0.89
PPP4R1-202ENST00000400555 DEFB131AP59861 70 aa9.5□□□□□ -0.89
PPP4R1-202ENST00000400555 ZFP2Q6ZN57 461 aa9.5□□□□□ -0.89
PPP4R1-202ENST00000400555 TOMM6Q96B49 74 aa9.5□□□□□ -0.89
PPP4R1-202ENST00000400555 SPXQ9BT56 116 aa9.5□□□□□ -0.89
PPP4R1-202ENST00000400555 IGHV3-38A0A0C4DH36 116 aa9.5□□□□□ -0.89
PPP4R1-202ENST00000400555 A6NDX4 124 aa9.5□□□□□ -0.89
PPP4R1-202ENST00000400555 CEMP1Q6PRD7 247 aaPredicted RBP9.5□□□□□ -0.89
PPP4R1-202ENST00000400555 J3QR89 54 aa9.49□□□□□ -0.89
PPP4R1-202ENST00000400555 SYT8Q8NBV8 401 aa9.49□□□□□ -0.89
PPP4R1-202ENST00000400555 PHLDA1Q8WV24 401 aaPredicted RBP9.49□□□□□ -0.89
PPP4R1-202ENST00000400555 C20orf78Q9BR46 151 aa9.49□□□□□ -0.89
PPP4R1-202ENST00000400555 PTH2Q96A98 100 aa9.49□□□□□ -0.89
PPP4R1-202ENST00000400555 ZMAT4Q9H898 229 aa9.49□□□□□ -0.89
PPP4R1-202ENST00000400555 PROK1P58294 105 aa9.49□□□□□ -0.89
PPP4R1-202ENST00000400555 NEXN-AS1Q8NBZ9 246 aa9.49□□□□□ -0.89
PPP4R1-202ENST00000400555 HIGD1BQ9P298 99 aa9.48□□□□□ -0.89
PPP4R1-202ENST00000400555 PSMG3-AS1Q96PY0 264 aa9.48□□□□□ -0.89
PPP4R1-202ENST00000400555 INSL3P51460 131 aa9.48□□□□□ -0.89
PPP4R1-202ENST00000400555 FOXI2Q6ZQN5 318 aa9.48□□□□□ -0.89
PPP4R1-202ENST00000400555 LENEPQ9Y5L5 61 aa9.48□□□□□ -0.89
PPP4R1-202ENST00000400555 G3V4G9 280 aa9.47□□□□□ -0.89
PPP4R1-202ENST00000400555 SLURP1P55000 103 aa9.47□□□□□ -0.89
PPP4R1-202ENST00000400555 PMVKQ15126 192 aa9.47□□□□□ -0.89
PPP4R1-202ENST00000400555 VCX2Q9H322 139 aa9.47□□□□□ -0.89
PPP4R1-202ENST00000400555 IGHV4OR15-8A0A075B7B6 117 aa9.47□□□□□ -0.89
PPP4R1-202ENST00000400555 A0A087WW49 117 aa9.47□□□□□ -0.89
PPP4R1-202ENST00000400555 TMEM238LA0A1B0GVL6 79 aa9.47□□□□□ -0.89
PPP4R1-202ENST00000400555 A6NJY4 79 aa9.47□□□□□ -0.89
PPP4R1-202ENST00000400555 RRN3P1Q2M238 152 aa9.47□□□□□ -0.89
PPP4R1-202ENST00000400555 TCTEX1D4Q5JR98 221 aa9.47□□□□□ -0.89
PPP4R1-202ENST00000400555 C18orf65Q6ZTR6 163 aa9.47□□□□□ -0.89
PPP4R1-202ENST00000400555 PPP1R17O96001 155 aa9.46□□□□□ -0.89
PPP4R1-202ENST00000400555 DYNLRB2Q8TF09 96 aa9.46□□□□□ -0.89
PPP4R1-202ENST00000400555 A0A0J9YXV3 536 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms