RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 KIR2DL5AQ8N109 375 aa13.99□□□□□ -0.17
COL18A1-204ENST00000400337 PRR14LQ5THK1 2151 aa13.98□□□□□ -0.17
COL18A1-204ENST00000400337 K7EQD1 137 aa13.98□□□□□ -0.17
COL18A1-204ENST00000400337 CRLF1O75462 422 aa13.98□□□□□ -0.17
COL18A1-204ENST00000400337 Q6ZVH6 145 aa13.98□□□□□ -0.17
COL18A1-204ENST00000400337 A0A0J9YXV3 536 aa13.97□□□□□ -0.17
COL18A1-204ENST00000400337 SLC25A29Q8N8R3 303 aa13.97□□□□□ -0.17
COL18A1-204ENST00000400337 IGKV1D-37A0A075B6S9 117 aa13.97□□□□□ -0.17
COL18A1-204ENST00000400337 FRMD6-AS1P0C7T7 363 aa13.97□□□□□ -0.17
COL18A1-204ENST00000400337 ZNF106Q9H2Y7 1883 aaKnown RBP13.97□□□□□ -0.17
COL18A1-204ENST00000400337 TRAV25A0A0B4J276 109 aa13.97□□□□□ -0.17
COL18A1-204ENST00000400337 LMO4P61968 165 aa13.97□□□□□ -0.17
COL18A1-204ENST00000400337 UBL5Q9BZL1 73 aa13.97□□□□□ -0.17
COL18A1-204ENST00000400337 WNK1Q9H4A3 2382 aa13.96□□□□□ -0.17
COL18A1-204ENST00000400337 NACAE9PAV3 2078 aa13.96□□□□□ -0.17
COL18A1-204ENST00000400337 TDRG1Q3Y452 100 aa13.96□□□□□ -0.17
COL18A1-204ENST00000400337 ANKRD39Q53RE8 183 aa13.96□□□□□ -0.17
COL18A1-204ENST00000400337 Q9HAA7 133 aa13.96□□□□□ -0.17
COL18A1-204ENST00000400337 ATP6V0E2Q8NHE4 81 aa13.96□□□□□ -0.17
COL18A1-204ENST00000400337 ESM1Q9NQ30 184 aa13.96□□□□□ -0.17
COL18A1-204ENST00000400337 A6NDX4 124 aa13.96□□□□□ -0.17
COL18A1-204ENST00000400337 C19orf84I3L1E1 186 aa13.96□□□□□ -0.17
COL18A1-204ENST00000400337 CHD3Q12873 2000 aaKnown RBP13.96□□□□□ -0.18
COL18A1-204ENST00000400337 CFC1BP0CG36 223 aa13.96□□□□□ -0.18
COL18A1-204ENST00000400337 CFC1P0CG37 223 aa13.96□□□□□ -0.18
COL18A1-204ENST00000400337 LINC01545Q5VT33 79 aa13.96□□□□□ -0.18
COL18A1-204ENST00000400337 LINC00574Q9H8X3 128 aa13.96□□□□□ -0.18
COL18A1-204ENST00000400337 HAMPP81172 84 aa13.95□□□□□ -0.18
COL18A1-204ENST00000400337 BOD1L2Q8IYS8 172 aa13.95□□□□□ -0.18
COL18A1-204ENST00000400337 ZNF503Q96F45 646 aa13.95□□□□□ -0.18
COL18A1-204ENST00000400337 RPL39P62891 51 aaKnown RBP13.95□□□□□ -0.18
COL18A1-204ENST00000400337 C9orf153Q5TBE3 101 aa13.95□□□□□ -0.18
COL18A1-204ENST00000400337 CCL25O15444 150 aa13.94□□□□□ -0.18
COL18A1-204ENST00000400337 KIAA1549LQ6ZVL6 1849 aa13.94□□□□□ -0.18
COL18A1-204ENST00000400337 LINC01548A6NM66 108 aa13.94□□□□□ -0.18
COL18A1-204ENST00000400337 IGLV10-54A0A075B6I4 117 aa13.94□□□□□ -0.18
COL18A1-204ENST00000400337 TMEM89A2RUT3 159 aa13.94□□□□□ -0.18
COL18A1-204ENST00000400337 ATP5G1P05496 136 aa13.94□□□□□ -0.18
COL18A1-204ENST00000400337 SPART-AS1P0CW21 52 aa13.94□□□□□ -0.18
COL18A1-204ENST00000400337 C1orf229Q6ZS94 237 aaPredicted RBP13.94□□□□□ -0.18
COL18A1-204ENST00000400337 ODF3BA8MYP8 253 aa13.93□□□□□ -0.18
COL18A1-204ENST00000400337 ARHGAP21Q5T5U3 1957 aa13.93□□□□□ -0.18
COL18A1-204ENST00000400337 CTRLP40313 264 aa13.93□□□□□ -0.18
COL18A1-204ENST00000400337 DAZ2Q13117 558 aaKnown RBP13.93□□□□□ -0.18
COL18A1-204ENST00000400337 DAZ4Q86SG3 579 aaKnown RBP13.93□□□□□ -0.18
COL18A1-204ENST00000400337 DAZ3Q9NR90 486 aaKnown RBP13.93□□□□□ -0.18
COL18A1-204ENST00000400337 DEFB125Q8N687 156 aa13.93□□□□□ -0.18
COL18A1-204ENST00000400337 CITED2Q99967 270 aaPredicted RBP13.93□□□□□ -0.18
COL18A1-204ENST00000400337 TMEM61Q8N0U2 210 aa13.93□□□□□ -0.18
COL18A1-204ENST00000400337 GAGE12HA6NDE8 117 aa13.92□□□□□ -0.18
COL18A1-204ENST00000400337 MRPL23Q16540 153 aaKnown RBP13.92□□□□□ -0.18
COL18A1-204ENST00000400337 NTN5Q8WTR8 489 aaPredicted RBP13.92□□□□□ -0.18
COL18A1-204ENST00000400337 C4orf3Q8WVX3 66 aa13.92□□□□□ -0.18
COL18A1-204ENST00000400337 PCNX3Q9H6A9 2034 aa13.92□□□□□ -0.18
COL18A1-204ENST00000400337 CCDC140Q96MF4 163 aa13.92□□□□□ -0.18
COL18A1-204ENST00000400337 TINCRA0A1B0GVN0 87 aa13.92□□□□□ -0.18
COL18A1-204ENST00000400337 RPL32P62910 135 aaKnown RBP13.92□□□□□ -0.18
COL18A1-204ENST00000400337 RBMY1FQ15415 496 aaKnown RBP13.92□□□□□ -0.18
COL18A1-204ENST00000400337 C1orf43Q9BWL3 253 aa13.91□□□□□ -0.18
COL18A1-204ENST00000400337 HERV-K104P63124 156 aa13.91□□□□□ -0.18
COL18A1-204ENST00000400337 DSCR8Q96T75 97 aa13.91□□□□□ -0.18
COL18A1-204ENST00000400337 PRORYQ9H606 182 aa13.91□□□□□ -0.18
COL18A1-204ENST00000400337 C19orf71A6NCJ1 209 aa13.9□□□□□ -0.18
COL18A1-204ENST00000400337 ICOSQ9Y6W8 199 aa13.9□□□□□ -0.18
COL18A1-204ENST00000400337 TRAV4A0A0B4J268 109 aa13.9□□□□□ -0.18
COL18A1-204ENST00000400337 TRBV6-1A0A0K0K1D8 114 aa13.9□□□□□ -0.18
COL18A1-204ENST00000400337 TNFRSF13BO14836 293 aaPredicted RBP13.9□□□□□ -0.18
COL18A1-204ENST00000400337 MYCNOSP40205 109 aa13.9□□□□□ -0.18
COL18A1-204ENST00000400337 MED12LQ86YW9 2145 aa13.9□□□□□ -0.18
COL18A1-204ENST00000400337 ZNF295-AS1Q8N0V1 137 aa13.9□□□□□ -0.18
COL18A1-204ENST00000400337 TTTY13Q9BZ97 58 aa13.9□□□□□ -0.18
COL18A1-204ENST00000400337 MDFICQ9P1T7 246 aa13.9□□□□□ -0.18
COL18A1-204ENST00000400337 TRBV7-3A0A075B6L6 115 aa13.89□□□□□ -0.19
COL18A1-204ENST00000400337 A0A0J9YX75 114 aa13.89□□□□□ -0.19
COL18A1-204ENST00000400337 EP400Q96L91 3159 aa13.89□□□□□ -0.19
COL18A1-204ENST00000400337 PRSS47A8MTI9 375 aa13.89□□□□□ -0.19
COL18A1-204ENST00000400337 IGHV3-30P01768 117 aa13.88□□□□□ -0.19
COL18A1-204ENST00000400337 IGHV3-33P01772 117 aa13.88□□□□□ -0.19
COL18A1-204ENST00000400337 IGHV3-30-3P0DP02 117 aa13.88□□□□□ -0.19
COL18A1-204ENST00000400337 IGHV3-30-5P0DP03 117 aa13.88□□□□□ -0.19
COL18A1-204ENST00000400337 MED14OSP0DP75 135 aa13.88□□□□□ -0.19
COL18A1-204ENST00000400337 TRAV12-1A0A0B4J245 112 aa13.88□□□□□ -0.19
COL18A1-204ENST00000400337 CLPSL1A2RUU4 121 aa13.88□□□□□ -0.19
COL18A1-204ENST00000400337 DEFB4AO15263 64 aa13.88□□□□□ -0.19
COL18A1-204ENST00000400337 LOXL1Q08397 574 aaPredicted RBP13.88□□□□□ -0.19
COL18A1-204ENST00000400337 DEFB135Q30KP9 77 aa13.87□□□□□ -0.19
COL18A1-204ENST00000400337 BAALCQ8WXS3 180 aa13.87□□□□□ -0.19
COL18A1-204ENST00000400337 IGHG4P01861 327 aa13.87□□□□□ -0.19
COL18A1-204ENST00000400337 HHLA3Q9XRX5 114 aa13.87□□□□□ -0.19
COL18A1-204ENST00000400337 IFITM1P13164 125 aa13.87□□□□□ -0.19
COL18A1-204ENST00000400337 IGLL5B9A064 214 aa13.86□□□□□ -0.19
COL18A1-204ENST00000400337 MUSTN1Q8IVN3 82 aa13.86□□□□□ -0.19
COL18A1-204ENST00000400337 TOMM6Q96B49 74 aa13.86□□□□□ -0.19
COL18A1-204ENST00000400337 DNAJC9-AS1A6NH13 148 aa13.86□□□□□ -0.19
COL18A1-204ENST00000400337 ZNF80P51504 273 aaPredicted RBP13.86□□□□□ -0.19
COL18A1-204ENST00000400337 NCOR2Q9Y618 2525 aa13.86□□□□□ -0.19
COL18A1-204ENST00000400337 TEX48A0A1B0GUV7 120 aa13.86□□□□□ -0.19
COL18A1-204ENST00000400337 COX7A2LO14548 114 aa13.86□□□□□ -0.19
COL18A1-204ENST00000400337 BAALC-AS2P0C853 105 aa13.85□□□□□ -0.19
COL18A1-204ENST00000400337 CAMK2N2Q96S95 79 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms