RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 Q9H8V8 135 aa7.66□□□□□ -1.18
PTPRM-203ENST00000400060 IGHV3OR16-8A0A075B7F1 116 aa7.66□□□□□ -1.18
PTPRM-203ENST00000400060 A0A0J9YXV3 536 aa7.66□□□□□ -1.18
PTPRM-203ENST00000400060 LOC107984640A0A0U1RRK4 108 aa7.66□□□□□ -1.18
PTPRM-203ENST00000400060 CRIP1P50238 77 aa7.66□□□□□ -1.18
PTPRM-203ENST00000400060 HIST2H2BCQ6DN03 193 aa7.66□□□□□ -1.18
PTPRM-203ENST00000400060 HIST2H2BDQ6DRA6 164 aa7.66□□□□□ -1.18
PTPRM-203ENST00000400060 LINC01560Q8TB33 94 aa7.66□□□□□ -1.18
PTPRM-203ENST00000400060 KAAG1Q9UBP8 84 aa7.66□□□□□ -1.18
PTPRM-203ENST00000400060 IGHV1OR15-1A0A075B7D0 117 aa7.66□□□□□ -1.18
PTPRM-203ENST00000400060 MBD3L4A6NDZ8 208 aaPredicted RBP7.66□□□□□ -1.18
PTPRM-203ENST00000400060 MBD3L3A6NE82 208 aaPredicted RBP7.66□□□□□ -1.18
PTPRM-203ENST00000400060 MBD3L5A6NJ08 208 aaPredicted RBP7.66□□□□□ -1.18
PTPRM-203ENST00000400060 TMEM256-PLSCR3K7ERE1 68 aa7.66□□□□□ -1.18
PTPRM-203ENST00000400060 SPRNQ5BIV9 151 aa7.66□□□□□ -1.18
PTPRM-203ENST00000400060 TMEM61Q8N0U2 210 aa7.66□□□□□ -1.18
PTPRM-203ENST00000400060 MBD3L2Q8NHZ7 208 aaPredicted RBP7.66□□□□□ -1.18
PTPRM-203ENST00000400060 NXPH4O95158 308 aa7.65□□□□□ -1.18
PTPRM-203ENST00000400060 UPK3BQ9BT76 320 aa7.65□□□□□ -1.18
PTPRM-203ENST00000400060 DAZAP2Q15038 168 aaPredicted RBP7.65□□□□□ -1.18
PTPRM-203ENST00000400060 RNASE6Q93091 150 aaKnown RBP7.65□□□□□ -1.18
PTPRM-203ENST00000400060 BCE1O60756 84 aa7.65□□□□□ -1.19
PTPRM-203ENST00000400060 NDUFA4O00483 81 aa7.64□□□□□ -1.19
PTPRM-203ENST00000400060 CGB3P0DN86 165 aa7.64□□□□□ -1.19
PTPRM-203ENST00000400060 CGB7P0DN87 165 aa7.64□□□□□ -1.19
PTPRM-203ENST00000400060 C20orf203Q8NBC4 194 aa7.64□□□□□ -1.19
PTPRM-203ENST00000400060 NPBQ8NG41 125 aa7.64□□□□□ -1.19
PTPRM-203ENST00000400060 CPAMD8Q8IZJ3 1885 aa7.64□□□□□ -1.19
PTPRM-203ENST00000400060 PROP1O75360 226 aa7.64□□□□□ -1.19
PTPRM-203ENST00000400060 MRPL36Q9P0J6 103 aaKnown RBP7.64□□□□□ -1.19
PTPRM-203ENST00000400060 PCNX3Q9H6A9 2034 aa7.64□□□□□ -1.19
PTPRM-203ENST00000400060 IGLV11-55A0A075B6I3 123 aa7.64□□□□□ -1.19
PTPRM-203ENST00000400060 TEX22C9J3V5 150 aa7.64□□□□□ -1.19
PTPRM-203ENST00000400060 FOXE3Q13461 319 aa7.64□□□□□ -1.19
PTPRM-203ENST00000400060 MSRB2Q9Y3D2 182 aa7.64□□□□□ -1.19
PTPRM-203ENST00000400060 DPH3Q96FX2 82 aa7.64□□□□□ -1.19
PTPRM-203ENST00000400060 KIAA2026Q5HYC2 2103 aa7.64□□□□□ -1.19
PTPRM-203ENST00000400060 A0A0G2JNJ9 132 aa7.63□□□□□ -1.19
PTPRM-203ENST00000400060 DAD1P61803 113 aa7.63□□□□□ -1.19
PTPRM-203ENST00000400060 Q9UFV3 132 aa7.63□□□□□ -1.19
PTPRM-203ENST00000400060 TRAV7A0A075B6U4 112 aa7.63□□□□□ -1.19
PTPRM-203ENST00000400060 ZNF22P17026 224 aaPredicted RBP7.63□□□□□ -1.19
PTPRM-203ENST00000400060 RIF1Q5UIP0 2472 aaKnown RBP7.63□□□□□ -1.19
PTPRM-203ENST00000400060 BLCAPP62952 87 aa7.63□□□□□ -1.19
PTPRM-203ENST00000400060 ROS1P08922 2347 aa7.63□□□□□ -1.19
PTPRM-203ENST00000400060 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.62□□□□□ -1.19
PTPRM-203ENST00000400060 RS1O15537 224 aa7.62□□□□□ -1.19
PTPRM-203ENST00000400060 PRB4P10163 310 aaPredicted RBP7.62□□□□□ -1.19
PTPRM-203ENST00000400060 SPTBN2O15020 2390 aa7.62□□□□□ -1.19
PTPRM-203ENST00000400060 LOXP28300 417 aaPredicted RBP7.62□□□□□ -1.19
PTPRM-203ENST00000400060 PIP4P1Q86T03 277 aa7.62□□□□□ -1.19
PTPRM-203ENST00000400060 RITA1Q96K30 269 aa7.62□□□□□ -1.19
PTPRM-203ENST00000400060 ZNRD1Q9P1U0 126 aa7.62□□□□□ -1.19
PTPRM-203ENST00000400060 NDUFA1O15239 70 aa7.62□□□□□ -1.19
PTPRM-203ENST00000400060 ACACAQ13085 2346 aa7.62□□□□□ -1.19
PTPRM-203ENST00000400060 NCKAP5O14513 1909 aa7.62□□□□□ -1.19
PTPRM-203ENST00000400060 ZNF407Q9C0G0 2248 aa7.62□□□□□ -1.19
PTPRM-203ENST00000400060 BUB3O43684 328 aa7.62□□□□□ -1.19
PTPRM-203ENST00000400060 ZNF80P51504 273 aaPredicted RBP7.62□□□□□ -1.19
PTPRM-203ENST00000400060 TRBV6-5A0A0K0K1A5 114 aa7.61□□□□□ -1.19
PTPRM-203ENST00000400060 C11orf44Q8N8P7 122 aa7.61□□□□□ -1.19
PTPRM-203ENST00000400060 KIR2DL5BQ8NHK3 375 aa7.61□□□□□ -1.19
PTPRM-203ENST00000400060 SND1-IT1Q9HBX3 110 aa7.61□□□□□ -1.19
PTPRM-203ENST00000400060 TIRAPP58753 221 aa7.61□□□□□ -1.19
PTPRM-203ENST00000400060 C6orf226Q5I0X4 101 aa7.61□□□□□ -1.19
PTPRM-203ENST00000400060 DEFB121Q5J5C9 76 aa7.61□□□□□ -1.19
PTPRM-203ENST00000400060 VMO1Q7Z5L0 202 aa7.61□□□□□ -1.19
PTPRM-203ENST00000400060 C14orf132Q9NPU4 83 aa7.61□□□□□ -1.19
PTPRM-203ENST00000400060 A0A0U1RQV1 116 aa7.61□□□□□ -1.19
PTPRM-203ENST00000400060 RPL39P62891 51 aaKnown RBP7.61□□□□□ -1.19
PTPRM-203ENST00000400060 PYGO1Q9Y3Y4 419 aa7.61□□□□□ -1.19
PTPRM-203ENST00000400060 HEATR1Q9H583 2144 aaKnown RBP7.61□□□□□ -1.19
PTPRM-203ENST00000400060 TRAV23DV6A0A075B6W5 121 aa7.61□□□□□ -1.19
PTPRM-203ENST00000400060 IGKV3-20P01619 116 aa7.61□□□□□ -1.19
PTPRM-203ENST00000400060 U3KQE9 123 aa7.61□□□□□ -1.19
PTPRM-203ENST00000400060 NHLRC4P0CG21 123 aaPredicted RBP7.6□□□□□ -1.19
PTPRM-203ENST00000400060 H3BUA1 57 aa7.6□□□□□ -1.19
PTPRM-203ENST00000400060 FUSP35637 526 aaKnown RBP eCLIP7.6□□□□□ -1.19
PTPRM-203ENST00000400060 WISP2O76076 250 aa7.6□□□□□ -1.19
PTPRM-203ENST00000400060 IGKV3OR2-268A0A0C4DH90 116 aa7.59□□□□□ -1.19
PTPRM-203ENST00000400060 J3QLI3 93 aa7.59□□□□□ -1.19
PTPRM-203ENST00000400060 TRBV12-3P01733 135 aa7.59□□□□□ -1.19
PTPRM-203ENST00000400060 WFDC11Q8NEX6 87 aa7.59□□□□□ -1.19
PTPRM-203ENST00000400060 TNRC6BQ9UPQ9 1833 aaKnown RBP7.59□□□□□ -1.19
PTPRM-203ENST00000400060 RHPN1-AS1Q9BWJ2 59 aa7.59□□□□□ -1.19
PTPRM-203ENST00000400060 IGLV2-18A0A075B6J9 118 aa7.59□□□□□ -1.19
PTPRM-203ENST00000400060 IGHV4OR15-8A0A075B7B6 117 aa7.59□□□□□ -1.19
PTPRM-203ENST00000400060 A0A087WW49 117 aa7.59□□□□□ -1.19
PTPRM-203ENST00000400060 DOCK7Q96N67 2140 aa7.58□□□□□ -1.2
PTPRM-203ENST00000400060 NBL1P41271 181 aa7.58□□□□□ -1.2
PTPRM-203ENST00000400060 SS18Q15532 418 aa7.58□□□□□ -1.2
PTPRM-203ENST00000400060 CRIP2P52943 208 aaPredicted RBP7.58□□□□□ -1.2
PTPRM-203ENST00000400060 NDPQ00604 133 aa7.58□□□□□ -1.2
PTPRM-203ENST00000400060 LINC00308Q8TCZ7 52 aa7.58□□□□□ -1.2
PTPRM-203ENST00000400060 MUC22E2RYF6 1773 aaPredicted RBP7.58□□□□□ -1.2
PTPRM-203ENST00000400060 TRBV10-3A0A0K0K1G6 114 aa7.58□□□□□ -1.2
PTPRM-203ENST00000400060 EBI3Q14213 229 aa7.58□□□□□ -1.2
PTPRM-203ENST00000400060 LYPD2Q6UXB3 125 aa7.58□□□□□ -1.2
PTPRM-203ENST00000400060 C5orf38Q86SI9 138 aa7.58□□□□□ -1.2
PTPRM-203ENST00000400060 SPTBN1Q01082 2364 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms