RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 LINC00477Q96M19 166 aa8.58□□□□□ -1.04
SKA3-203ENST00000400018 hDV102S1A0JD36 115 aa8.58□□□□□ -1.04
SKA3-203ENST00000400018 ARMS2P0C7Q2 107 aa8.58□□□□□ -1.04
SKA3-203ENST00000400018 OR10J3Q5JRS4 329 aa8.58□□□□□ -1.04
SKA3-203ENST00000400018 STHQ8IWL8 128 aa8.58□□□□□ -1.04
SKA3-203ENST00000400018 RPP21Q9H633 154 aaKnown RBP8.58□□□□□ -1.04
SKA3-203ENST00000400018 IL36BQ9NZH7 164 aa8.58□□□□□ -1.04
SKA3-203ENST00000400018 COL7A1Q02388 2944 aa8.58□□□□□ -1.04
SKA3-203ENST00000400018 H3BVH4 76 aa8.57□□□□□ -1.04
SKA3-203ENST00000400018 NDFIP1Q9BT67 221 aa8.57□□□□□ -1.04
SKA3-203ENST00000400018 TMEM189A5PLL7 270 aa8.57□□□□□ -1.04
SKA3-203ENST00000400018 DEFB4AO15263 64 aa8.57□□□□□ -1.04
SKA3-203ENST00000400018 HLA-DRB4P13762 266 aa8.57□□□□□ -1.04
SKA3-203ENST00000400018 RPL24P83731 157 aaKnown RBP8.57□□□□□ -1.04
SKA3-203ENST00000400018 GTF2H5Q6ZYL4 71 aa8.57□□□□□ -1.04
SKA3-203ENST00000400018 JPT2Q9H910 190 aa8.57□□□□□ -1.04
SKA3-203ENST00000400018 MDFICQ9P1T7 246 aa8.57□□□□□ -1.04
SKA3-203ENST00000400018 HLA-DRB4X5D2U9 266 aa8.57□□□□□ -1.04
SKA3-203ENST00000400018 LYZL1Q6UWQ5 148 aa8.56□□□□□ -1.04
SKA3-203ENST00000400018 FOXI2Q6ZQN5 318 aa8.56□□□□□ -1.04
SKA3-203ENST00000400018 GIG44P09565 113 aaPredicted RBP8.56□□□□□ -1.04
SKA3-203ENST00000400018 BEAN1Q3B7T3 259 aa8.56□□□□□ -1.04
SKA3-203ENST00000400018 SLC25A34Q6PIV7 304 aa8.56□□□□□ -1.04
SKA3-203ENST00000400018 OR10AG1Q8NH19 301 aa8.56□□□□□ -1.04
SKA3-203ENST00000400018 OSTCQ9NRP0 149 aa8.56□□□□□ -1.04
SKA3-203ENST00000400018 DNAH3Q8TD57 4116 aa8.56□□□□□ -1.04
SKA3-203ENST00000400018 FABP5P3A8MUU1 101 aa8.55□□□□□ -1.04
SKA3-203ENST00000400018 GAS8-AS1O95177 125 aa8.55□□□□□ -1.04
SKA3-203ENST00000400018 C9orf66Q5T8R8 295 aa8.55□□□□□ -1.04
SKA3-203ENST00000400018 FAM19A4Q96LR4 140 aa8.55□□□□□ -1.04
SKA3-203ENST00000400018 GNB1LQ9BYB4 327 aa8.55□□□□□ -1.04
SKA3-203ENST00000400018 TEX48A0A1B0GUV7 120 aa8.55□□□□□ -1.04
SKA3-203ENST00000400018 RBAKDNA6NC62 111 aa8.55□□□□□ -1.04
SKA3-203ENST00000400018 H3BUT2 72 aa8.55□□□□□ -1.04
SKA3-203ENST00000400018 HSD52Q0P140 79 aa8.55□□□□□ -1.04
SKA3-203ENST00000400018 SNAI2O43623 268 aa8.54□□□□□ -1.04
SKA3-203ENST00000400018 EMP1P54849 157 aa8.54□□□□□ -1.04
SKA3-203ENST00000400018 Q8N1Y9 231 aa8.54□□□□□ -1.04
SKA3-203ENST00000400018 MRPL53Q96EL3 112 aaKnown RBP8.54□□□□□ -1.04
SKA3-203ENST00000400018 AP1S3Q96PC3 154 aa8.54□□□□□ -1.04
SKA3-203ENST00000400018 SIGLEC8Q9NYZ4 499 aa8.54□□□□□ -1.04
SKA3-203ENST00000400018 M0R381 172 aa8.54□□□□□ -1.04
SKA3-203ENST00000400018 HSBP1O75506 76 aa8.54□□□□□ -1.04
SKA3-203ENST00000400018 TMEM136Q6ZRR5 245 aa8.54□□□□□ -1.04
SKA3-203ENST00000400018 LY96Q9Y6Y9 160 aa8.54□□□□□ -1.04
SKA3-203ENST00000400018 KLLNB2CW77 178 aa8.53□□□□□ -1.04
SKA3-203ENST00000400018 WFDC9Q8NEX5 89 aa8.53□□□□□ -1.04
SKA3-203ENST00000400018 GEMIN7Q9H840 131 aaKnown RBP8.53□□□□□ -1.04
SKA3-203ENST00000400018 ST20Q9HBF5 79 aa8.53□□□□□ -1.04
SKA3-203ENST00000400018 RETNQ9HD89 108 aa8.53□□□□□ -1.04
SKA3-203ENST00000400018 SMIM27A0A1W2PRY6 76 aa8.52□□□□□ -1.04
SKA3-203ENST00000400018 GAGE12HA6NDE8 117 aa8.52□□□□□ -1.04
SKA3-203ENST00000400018 K7EP34 96 aa8.52□□□□□ -1.04
SKA3-203ENST00000400018 OR2K2Q8NGT1 345 aa8.52□□□□□ -1.04
SKA3-203ENST00000400018 C18orf32Q8TCD1 76 aa8.52□□□□□ -1.04
SKA3-203ENST00000400018 ZNF479Q96JC4 524 aa8.52□□□□□ -1.04
SKA3-203ENST00000400018 MCRIP2Q9BUT9 160 aaKnown RBP8.52□□□□□ -1.04
SKA3-203ENST00000400018 TRAV9-1A0A075B6T8 112 aa8.52□□□□□ -1.05
SKA3-203ENST00000400018 IGHV3-73A0A0B4J1V6 119 aa8.52□□□□□ -1.05
SKA3-203ENST00000400018 FBLL1A6NHQ2 334 aaKnown RBP8.52□□□□□ -1.05
SKA3-203ENST00000400018 SMKR1H3BMG3 65 aa8.52□□□□□ -1.05
SKA3-203ENST00000400018 TRPT1Q86TN4 253 aaKnown RBP8.52□□□□□ -1.05
SKA3-203ENST00000400018 GTSCR1Q86UQ5 136 aa8.52□□□□□ -1.05
SKA3-203ENST00000400018 C1orf158Q8N1D5 194 aa8.52□□□□□ -1.05
SKA3-203ENST00000400018 LINC01587Q99440 93 aa8.52□□□□□ -1.05
SKA3-203ENST00000400018 DEFB135Q30KP9 77 aa8.52□□□□□ -1.05
SKA3-203ENST00000400018 RNASEKQ6P5S7 137 aaKnown RBP8.52□□□□□ -1.05
SKA3-203ENST00000400018 FAM231DQ6ZW35 169 aa8.52□□□□□ -1.05
SKA3-203ENST00000400018 MRAPQ8TCY5 172 aa8.52□□□□□ -1.05
SKA3-203ENST00000400018 FAM110AQ9BQ89 295 aa8.52□□□□□ -1.05
SKA3-203ENST00000400018 SS18L2Q9UHA2 77 aa8.52□□□□□ -1.05
SKA3-203ENST00000400018 MEGF8Q7Z7M0 2845 aa8.51□□□□□ -1.05
SKA3-203ENST00000400018 TRAV26-2A0A0B4J265 109 aa8.51□□□□□ -1.05
SKA3-203ENST00000400018 TRAV25A0A0B4J276 109 aa8.51□□□□□ -1.05
SKA3-203ENST00000400018 S100A4P26447 101 aaKnown RBP8.51□□□□□ -1.05
SKA3-203ENST00000400018 RAB37Q96AX2 223 aa8.51□□□□□ -1.05
SKA3-203ENST00000400018 TRBV6-1A0A0K0K1D8 114 aa8.51□□□□□ -1.05
SKA3-203ENST00000400018 C9orf118A6NHY6 69 aa8.51□□□□□ -1.05
SKA3-203ENST00000400018 MT-ND6P03923 174 aa8.51□□□□□ -1.05
SKA3-203ENST00000400018 SMIM17P0DL12 118 aa8.51□□□□□ -1.05
SKA3-203ENST00000400018 IGHV4-30-4P0DP06 118 aa8.51□□□□□ -1.05
SKA3-203ENST00000400018 RNASE3P12724 160 aaKnown RBP8.51□□□□□ -1.05
SKA3-203ENST00000400018 GATA1P15976 413 aaPredicted RBP8.51□□□□□ -1.05
SKA3-203ENST00000400018 TWIST1Q15672 202 aa8.51□□□□□ -1.05
SKA3-203ENST00000400018 FAM159AQ6UWV7 190 aa8.51□□□□□ -1.05
SKA3-203ENST00000400018 TMEM70Q9BUB7 260 aa8.51□□□□□ -1.05
SKA3-203ENST00000400018 TRAV21A0A0B4J279 112 aa8.5□□□□□ -1.05
SKA3-203ENST00000400018 A8MWL6 223 aa8.5□□□□□ -1.05
SKA3-203ENST00000400018 EVI2AP22794 236 aa8.5□□□□□ -1.05
SKA3-203ENST00000400018 LINC00173Q6ZV60 143 aa8.5□□□□□ -1.05
SKA3-203ENST00000400018 PGPEP1Q9NXJ5 209 aa8.5□□□□□ -1.05
SKA3-203ENST00000400018 A0A087WWL8 130 aa8.5□□□□□ -1.05
SKA3-203ENST00000400018 NCR2O95944 276 aa8.5□□□□□ -1.05
SKA3-203ENST00000400018 SCRT2Q9NQ03 307 aa8.5□□□□□ -1.05
SKA3-203ENST00000400018 APCSP02743 223 aa8.49□□□□□ -1.05
SKA3-203ENST00000400018 PET117Q6UWS5 81 aa8.49□□□□□ -1.05
SKA3-203ENST00000400018 SPCS1Q9Y6A9 102 aa8.49□□□□□ -1.05
SKA3-203ENST00000400018 PRKDCP78527 4128 aaKnown RBP8.49□□□□□ -1.05
SKA3-203ENST00000400018 H0Y8G0 127 aa8.49□□□□□ -1.05
SKA3-203ENST00000400018 DUSP14O95147 198 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms