RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 TMEM86BQ8N661 226 aa6.56□□□□□ -1.36
RETREG1-202ENST00000399793 MBD3L2Q8NHZ7 208 aaPredicted RBP6.56□□□□□ -1.36
RETREG1-202ENST00000399793 TMEM141Q96I45 108 aa6.56□□□□□ -1.36
RETREG1-202ENST00000399793 ZNF580Q9UK33 172 aa6.56□□□□□ -1.36
RETREG1-202ENST00000399793 SDHAF1A6NFY7 115 aa6.55□□□□□ -1.36
RETREG1-202ENST00000399793 RNF182Q8N6D2 247 aa6.55□□□□□ -1.36
RETREG1-202ENST00000399793 LITAFQ99732 161 aa6.55□□□□□ -1.36
RETREG1-202ENST00000399793 DSPP15924 2871 aaKnown RBP6.55□□□□□ -1.36
RETREG1-202ENST00000399793 MED13Q9UHV7 2174 aa6.55□□□□□ -1.36
RETREG1-202ENST00000399793 MGAQ8IWI9 3026 aa6.55□□□□□ -1.36
RETREG1-202ENST00000399793 TRAV12-3A0A0B4J271 114 aa6.55□□□□□ -1.36
RETREG1-202ENST00000399793 IGHV1-18A0A0C4DH31 117 aa6.55□□□□□ -1.36
RETREG1-202ENST00000399793 A0A0J9YX75 114 aa6.55□□□□□ -1.36
RETREG1-202ENST00000399793 NPC2P61916 151 aa6.55□□□□□ -1.36
RETREG1-202ENST00000399793 DAZ2Q13117 558 aaKnown RBP6.55□□□□□ -1.36
RETREG1-202ENST00000399793 TMEM200BQ69YZ2 307 aa6.55□□□□□ -1.36
RETREG1-202ENST00000399793 DAZ4Q86SG3 579 aaKnown RBP6.55□□□□□ -1.36
RETREG1-202ENST00000399793 DEFB127Q9H1M4 99 aa6.55□□□□□ -1.36
RETREG1-202ENST00000399793 DAZ1Q9NQZ3 744 aaKnown RBP6.55□□□□□ -1.36
RETREG1-202ENST00000399793 DAZ3Q9NR90 486 aaKnown RBP6.55□□□□□ -1.36
RETREG1-202ENST00000399793 LY6G6EA0A0G2JKS1 128 aa6.54□□□□□ -1.36
RETREG1-202ENST00000399793 NTN3O00634 580 aaPredicted RBP6.54□□□□□ -1.36
RETREG1-202ENST00000399793 ADAMTSL4-AS1Q5T5F5 129 aa6.54□□□□□ -1.36
RETREG1-202ENST00000399793 LINC00311Q8N616 119 aa6.54□□□□□ -1.36
RETREG1-202ENST00000399793 U3KQA8 63 aa6.54□□□□□ -1.36
RETREG1-202ENST00000399793 DCHS1Q96JQ0 3298 aa6.54□□□□□ -1.36
RETREG1-202ENST00000399793 SYNJ2BPP57105 145 aa6.54□□□□□ -1.36
RETREG1-202ENST00000399793 TIRAPP58753 221 aa6.54□□□□□ -1.36
RETREG1-202ENST00000399793 GPHB5Q86YW7 130 aa6.54□□□□□ -1.36
RETREG1-202ENST00000399793 TIMM17AQ99595 171 aa6.54□□□□□ -1.36
RETREG1-202ENST00000399793 ZNF415Q09FC8 603 aa6.54□□□□□ -1.36
RETREG1-202ENST00000399793 FHL2Q14192 279 aa6.54□□□□□ -1.36
RETREG1-202ENST00000399793 DYNLRB1Q9NP97 96 aa6.54□□□□□ -1.36
RETREG1-202ENST00000399793 C9orf85Q96MD7 179 aa6.53□□□□□ -1.36
RETREG1-202ENST00000399793 DKK4Q9UBT3 224 aa6.53□□□□□ -1.36
RETREG1-202ENST00000399793 IGHV3OR16-8A0A075B7F1 116 aa6.53□□□□□ -1.36
RETREG1-202ENST00000399793 ZNF784Q8NCA9 323 aaPredicted RBP6.53□□□□□ -1.36
RETREG1-202ENST00000399793 OPRPNQ99935 248 aaPredicted RBP6.53□□□□□ -1.36
RETREG1-202ENST00000399793 A0A087WVE0 104 aa6.52□□□□□ -1.37
RETREG1-202ENST00000399793 IGKV3D-7A0A0C4DH55 119 aa6.52□□□□□ -1.37
RETREG1-202ENST00000399793 IGLV1-44P01699 117 aa6.52□□□□□ -1.37
RETREG1-202ENST00000399793 TMEM61Q8N0U2 210 aa6.52□□□□□ -1.37
RETREG1-202ENST00000399793 DAND5Q8N907 189 aa6.52□□□□□ -1.37
RETREG1-202ENST00000399793 CNEP1R1Q8N9A8 125 aa6.52□□□□□ -1.37
RETREG1-202ENST00000399793 SPRR3Q9UBC9 169 aa6.52□□□□□ -1.37
RETREG1-202ENST00000399793 KALRNO60229 2985 aa6.52□□□□□ -1.37
RETREG1-202ENST00000399793 IGHV3OR16-10A0A075B7F0 116 aa6.52□□□□□ -1.37
RETREG1-202ENST00000399793 M0R1W7 72 aa6.52□□□□□ -1.37
RETREG1-202ENST00000399793 V9GYY9 64 aa6.52□□□□□ -1.37
RETREG1-202ENST00000399793 FAM236DA0A1B0GTK5 79 aa6.52□□□□□ -1.37
RETREG1-202ENST00000399793 FAM236CP0DP71 79 aa6.52□□□□□ -1.37
RETREG1-202ENST00000399793 FAM27E3Q08E93 113 aa6.52□□□□□ -1.37
RETREG1-202ENST00000399793 PRRC2CQ9Y520 2896 aaKnown RBP6.51□□□□□ -1.37
RETREG1-202ENST00000399793 USP17L23D6RBM5 183 aa6.51□□□□□ -1.37
RETREG1-202ENST00000399793 PPP1R17O96001 155 aa6.51□□□□□ -1.37
RETREG1-202ENST00000399793 IGHV3-23P01764 117 aa6.51□□□□□ -1.37
RETREG1-202ENST00000399793 BAALC-AS2P0C853 105 aa6.51□□□□□ -1.37
RETREG1-202ENST00000399793 PRORYQ9H606 182 aa6.51□□□□□ -1.37
RETREG1-202ENST00000399793 ZZEF1O43149 2961 aa6.51□□□□□ -1.37
RETREG1-202ENST00000399793 A0A0J9YXV3 536 aa6.5□□□□□ -1.37
RETREG1-202ENST00000399793 F8W735 103 aaPredicted RBP6.5□□□□□ -1.37
RETREG1-202ENST00000399793 IGHV3-30-3P0DP02 117 aa6.5□□□□□ -1.37
RETREG1-202ENST00000399793 MIAQ16674 131 aa6.5□□□□□ -1.37
RETREG1-202ENST00000399793 C9orf139Q6ZV77 190 aa6.5□□□□□ -1.37
RETREG1-202ENST00000399793 FAM223AQ8IWN6 122 aa6.5□□□□□ -1.37
RETREG1-202ENST00000399793 LINC01561Q8N1V8 128 aa6.5□□□□□ -1.37
RETREG1-202ENST00000399793 ZFAND3Q9H8U3 227 aa6.5□□□□□ -1.37
RETREG1-202ENST00000399793 C22orf24Q9Y442 160 aa6.5□□□□□ -1.37
RETREG1-202ENST00000399793 EYSQ5T1H1 3165 aa6.5□□□□□ -1.37
RETREG1-202ENST00000399793 POLR2KP53803 58 aaKnown RBP6.5□□□□□ -1.37
RETREG1-202ENST00000399793 PHLDA3Q9Y5J5 127 aa6.5□□□□□ -1.37
RETREG1-202ENST00000399793 S100A4P26447 101 aaKnown RBP6.5□□□□□ -1.37
RETREG1-202ENST00000399793 PRB3Q04118 309 aaPredicted RBP6.5□□□□□ -1.37
RETREG1-202ENST00000399793 PRR9Q5T870 116 aa6.5□□□□□ -1.37
RETREG1-202ENST00000399793 WFDC11Q8NEX6 87 aa6.5□□□□□ -1.37
RETREG1-202ENST00000399793 CACNA1EQ15878 2313 aa6.49□□□□□ -1.37
RETREG1-202ENST00000399793 IGHV3-35A0A0C4DH35 117 aa6.49□□□□□ -1.37
RETREG1-202ENST00000399793 FAM223BA6NKX1 122 aa6.49□□□□□ -1.37
RETREG1-202ENST00000399793 LOXP28300 417 aaPredicted RBP6.49□□□□□ -1.37
RETREG1-202ENST00000399793 NDUFC2-KCTD14E9PQ53 114 aa6.49□□□□□ -1.37
RETREG1-202ENST00000399793 COX7A2LO14548 114 aa6.49□□□□□ -1.37
RETREG1-202ENST00000399793 VCYO14598 125 aa6.49□□□□□ -1.37
RETREG1-202ENST00000399793 IGHV1-46P01743 117 aa6.49□□□□□ -1.37
RETREG1-202ENST00000399793 INAFM2P0DMQ5 153 aa6.49□□□□□ -1.37
RETREG1-202ENST00000399793 EPM2AB3EWF7 344 aa6.48□□□□□ -1.37
RETREG1-202ENST00000399793 BUB3O43684 328 aa6.48□□□□□ -1.37
RETREG1-202ENST00000399793 NXPH4O95158 308 aa6.48□□□□□ -1.37
RETREG1-202ENST00000399793 NDUFC2O95298 119 aa6.48□□□□□ -1.37
RETREG1-202ENST00000399793 AVPP01185 164 aa6.48□□□□□ -1.37
RETREG1-202ENST00000399793 PSMB8P28062 276 aa6.48□□□□□ -1.37
RETREG1-202ENST00000399793 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.48□□□□□ -1.37
RETREG1-202ENST00000399793 PRIMA1Q86XR5 153 aa6.48□□□□□ -1.37
RETREG1-202ENST00000399793 PRSS33Q8NF86 280 aa6.48□□□□□ -1.37
RETREG1-202ENST00000399793 TMEM243Q9BU79 118 aa6.48□□□□□ -1.37
RETREG1-202ENST00000399793 TRAV12-2A0A075B6T6 113 aa6.48□□□□□ -1.37
RETREG1-202ENST00000399793 IGHV1-3A0A0C4DH29 117 aa6.48□□□□□ -1.37
RETREG1-202ENST00000399793 IGF1P05019 195 aa6.48□□□□□ -1.37
RETREG1-202ENST00000399793 BEAN1Q3B7T3 259 aa6.48□□□□□ -1.37
RETREG1-202ENST00000399793 C1orf195Q5TG92 126 aa6.48□□□□□ -1.37
RETREG1-202ENST00000399793 A0A0U1RQV1 116 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms