RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 DLX4Q92988 240 aaPredicted RBP11.36□□□□□ -0.59
COL25A1-201ENST00000399126 GFRA4Q9GZZ7 299 aa11.36□□□□□ -0.59
COL25A1-201ENST00000399126 OR4C46A6NHA9 309 aa11.36□□□□□ -0.59
COL25A1-201ENST00000399126 ARMS2P0C7Q2 107 aa11.36□□□□□ -0.59
COL25A1-201ENST00000399126 C11orf21Q9P2W6 132 aa11.36□□□□□ -0.59
COL25A1-201ENST00000399126 V9GYY9 64 aa11.36□□□□□ -0.59
COL25A1-201ENST00000399126 ZNF688P0C7X2 276 aa11.35□□□□□ -0.59
COL25A1-201ENST00000399126 KIR3DS1Q14943 382 aa11.35□□□□□ -0.59
COL25A1-201ENST00000399126 TMEM97Q5BJF2 176 aa11.35□□□□□ -0.59
COL25A1-201ENST00000399126 C6orf226Q5I0X4 101 aa11.35□□□□□ -0.59
COL25A1-201ENST00000399126 EBLN2Q6P2I7 272 aa11.35□□□□□ -0.59
COL25A1-201ENST00000399126 SCRT2Q9NQ03 307 aa11.35□□□□□ -0.59
COL25A1-201ENST00000399126 A0A1W2PPM0 123 aa11.35□□□□□ -0.59
COL25A1-201ENST00000399126 VWFP04275 2813 aa11.35□□□□□ -0.59
COL25A1-201ENST00000399126 B5MCH6 92 aa11.34□□□□□ -0.59
COL25A1-201ENST00000399126 ORM1P02763 201 aa11.34□□□□□ -0.59
COL25A1-201ENST00000399126 PMCHL2Q9BQD1 86 aa11.34□□□□□ -0.59
COL25A1-201ENST00000399126 HBBP68871 147 aa11.34□□□□□ -0.59
COL25A1-201ENST00000399126 STHQ8IWL8 128 aa11.34□□□□□ -0.59
COL25A1-201ENST00000399126 OR8A1Q8NGG7 326 aa11.34□□□□□ -0.59
COL25A1-201ENST00000399126 HLA-DQA1P01909 254 aa11.33□□□□□ -0.59
COL25A1-201ENST00000399126 APCSP02743 223 aa11.33□□□□□ -0.59
COL25A1-201ENST00000399126 SRIP30626 198 aa11.33□□□□□ -0.59
COL25A1-201ENST00000399126 FOXA3P55318 350 aaPredicted RBP11.33□□□□□ -0.59
COL25A1-201ENST00000399126 OR10J6PQ8NGY7 276 aa11.33□□□□□ -0.59
COL25A1-201ENST00000399126 TEP1Q99973 2627 aaKnown RBP11.33□□□□□ -0.6
COL25A1-201ENST00000399126 FABP5P3A8MUU1 101 aa11.33□□□□□ -0.6
COL25A1-201ENST00000399126 FABP2P12104 132 aa11.33□□□□□ -0.6
COL25A1-201ENST00000399126 PSMG4Q5JS54 123 aa11.33□□□□□ -0.6
COL25A1-201ENST00000399126 ATP5L2Q7Z4Y8 100 aa11.33□□□□□ -0.6
COL25A1-201ENST00000399126 BAHCC1Q9P281 2608 aa11.33□□□□□ -0.6
COL25A1-201ENST00000399126 M0R2Z0 102 aa11.32□□□□□ -0.6
COL25A1-201ENST00000399126 HSBP1O75506 76 aa11.32□□□□□ -0.6
COL25A1-201ENST00000399126 LYZL1Q6UWQ5 148 aa11.32□□□□□ -0.6
COL25A1-201ENST00000399126 ANAPC13Q9BS18 74 aa11.32□□□□□ -0.6
COL25A1-201ENST00000399126 TMEM70Q9BUB7 260 aa11.32□□□□□ -0.6
COL25A1-201ENST00000399126 C16orf95Q9H693 158 aa11.32□□□□□ -0.6
COL25A1-201ENST00000399126 SPANXB1Q9NS25 103 aaPredicted RBP11.32□□□□□ -0.6
COL25A1-201ENST00000399126 CYSLTR1Q9Y271 337 aa11.32□□□□□ -0.6
COL25A1-201ENST00000399126 IGKV3D-20A0A0C4DH25 116 aa11.32□□□□□ -0.6
COL25A1-201ENST00000399126 OVOL1O14753 267 aa11.32□□□□□ -0.6
COL25A1-201ENST00000399126 ZFAND2AQ8N6M9 145 aa11.32□□□□□ -0.6
COL25A1-201ENST00000399126 PEMTQ9UBM1 199 aa11.32□□□□□ -0.6
COL25A1-201ENST00000399126 hDV102S1A0JD36 115 aa11.32□□□□□ -0.6
COL25A1-201ENST00000399126 RASL11AQ6T310 242 aa11.32□□□□□ -0.6
COL25A1-201ENST00000399126 A0A1B0GUT8 65 aa11.31□□□□□ -0.6
COL25A1-201ENST00000399126 K7EQG2 157 aa11.31□□□□□ -0.6
COL25A1-201ENST00000399126 SPINK8P0C7L1 97 aa11.31□□□□□ -0.6
COL25A1-201ENST00000399126 NAA38Q9BRA0 125 aaKnown RBP11.31□□□□□ -0.6
COL25A1-201ENST00000399126 ATRQ13535 2644 aa11.3□□□□□ -0.6
COL25A1-201ENST00000399126 LINC00477Q96M19 166 aa11.3□□□□□ -0.6
COL25A1-201ENST00000399126 IGKV3-20P01619 116 aa11.3□□□□□ -0.6
COL25A1-201ENST00000399126 CSN3P07498 182 aa11.3□□□□□ -0.6
COL25A1-201ENST00000399126 LINC01559Q495D7 138 aa11.3□□□□□ -0.6
COL25A1-201ENST00000399126 TMEM191AQ9H0A3 160 aa11.3□□□□□ -0.6
COL25A1-201ENST00000399126 CRXO43186 299 aaPredicted RBP11.29□□□□□ -0.6
COL25A1-201ENST00000399126 TMEM61Q8N0U2 210 aa11.29□□□□□ -0.6
COL25A1-201ENST00000399126 IGLC6P0CF74 106 aa11.29□□□□□ -0.6
COL25A1-201ENST00000399126 C2orf91Q6ZV80 131 aa11.29□□□□□ -0.6
COL25A1-201ENST00000399126 FAM19A4Q96LR4 140 aa11.29□□□□□ -0.6
COL25A1-201ENST00000399126 CCL24O00175 119 aa11.28□□□□□ -0.6
COL25A1-201ENST00000399126 FHL3Q13643 280 aa11.28□□□□□ -0.6
COL25A1-201ENST00000399126 MSRB1Q9NZV6 116 aa11.28□□□□□ -0.6
COL25A1-201ENST00000399126 RNASE4P34096 147 aaKnown RBP11.28□□□□□ -0.6
COL25A1-201ENST00000399126 PROK1P58294 105 aa11.28□□□□□ -0.6
COL25A1-201ENST00000399126 A0A087WX48 190 aa11.27□□□□□ -0.6
COL25A1-201ENST00000399126 F8W1H4 67 aa11.27□□□□□ -0.61
COL25A1-201ENST00000399126 SPRY2O43597 315 aa11.27□□□□□ -0.61
COL25A1-201ENST00000399126 COX8AP10176 69 aa11.27□□□□□ -0.61
COL25A1-201ENST00000399126 KRTAP10-3P60369 221 aa11.27□□□□□ -0.61
COL25A1-201ENST00000399126 SNRPD3P62318 126 aaKnown RBP11.27□□□□□ -0.61
COL25A1-201ENST00000399126 LENEPQ9Y5L5 61 aa11.27□□□□□ -0.61
COL25A1-201ENST00000399126 RIGQ13278 110 aa11.26□□□□□ -0.61
COL25A1-201ENST00000399126 Q6AWC8 147 aa11.26□□□□□ -0.61
COL25A1-201ENST00000399126 C1QTNF4Q9BXJ3 329 aa11.26□□□□□ -0.61
COL25A1-201ENST00000399126 NOTCH3Q9UM47 2321 aa11.26□□□□□ -0.61
COL25A1-201ENST00000399126 A0A0J9YX75 114 aa11.25□□□□□ -0.61
COL25A1-201ENST00000399126 ADARB2-AS1A8MUL3 147 aa11.25□□□□□ -0.61
COL25A1-201ENST00000399126 NDUFA7O95182 113 aa11.25□□□□□ -0.61
COL25A1-201ENST00000399126 NSUN5P1Q3KNT7 163 aa11.25□□□□□ -0.61
COL25A1-201ENST00000399126 RAB37Q96AX2 223 aa11.25□□□□□ -0.61
COL25A1-201ENST00000399126 TRRAPQ9Y4A5 3859 aa11.25□□□□□ -0.61
COL25A1-201ENST00000399126 SAMD5Q5TGI4 173 aa11.25□□□□□ -0.61
COL25A1-201ENST00000399126 DYNLRB2Q8TF09 96 aa11.25□□□□□ -0.61
COL25A1-201ENST00000399126 TRAV12-2A0A075B6T6 113 aa11.24□□□□□ -0.61
COL25A1-201ENST00000399126 SYS1-DBNDD2H3BUS1 97 aa11.24□□□□□ -0.61
COL25A1-201ENST00000399126 TWIST1Q15672 202 aa11.24□□□□□ -0.61
COL25A1-201ENST00000399126 DEFB114Q30KQ6 69 aa11.24□□□□□ -0.61
COL25A1-201ENST00000399126 KNCNA6PVL3 124 aa11.24□□□□□ -0.61
COL25A1-201ENST00000399126 FAM159AQ6UWV7 190 aa11.24□□□□□ -0.61
COL25A1-201ENST00000399126 SIGLEC8Q9NYZ4 499 aa11.24□□□□□ -0.61
COL25A1-201ENST00000399126 AMN1Q8IY45 258 aa11.23□□□□□ -0.61
COL25A1-201ENST00000399126 TIMM8BQ9Y5J9 83 aaPredicted RBP11.23□□□□□ -0.61
COL25A1-201ENST00000399126 KLLNB2CW77 178 aa11.23□□□□□ -0.61
COL25A1-201ENST00000399126 H3BVH4 76 aa11.23□□□□□ -0.61
COL25A1-201ENST00000399126 DEFB131AP59861 70 aa11.23□□□□□ -0.61
COL25A1-201ENST00000399126 ANXA2RQ3ZCQ2 193 aa11.23□□□□□ -0.61
COL25A1-201ENST00000399126 APRG1Q8IVJ8 170 aa11.23□□□□□ -0.61
COL25A1-201ENST00000399126 TRAV21A0A0B4J279 112 aa11.22□□□□□ -0.61
COL25A1-201ENST00000399126 TINCRA0A1B0GVN0 87 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms