RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 PRYO14603 147 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 SERF1AO75920 110 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 SNRPCP09234 159 aaKnown RBP2.13□□□□□ -2.07
CHD9-202ENST00000398510 SPINK13Q1W4C9 94 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 CASC2Q6XLA1 102 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 POLQO75417 2590 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 ABCA12Q86UK0 2595 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 A0A1B0GX51 115 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 CLPSP04118 112 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 FNDC4Q9H6D8 234 aaPredicted RBP2.13□□□□□ -2.07
CHD9-202ENST00000398510 LINC00574Q9H8X3 128 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 FAM215AQ9Y5M1 114 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 ODF3BA8MYP8 253 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 QRFPP83859 136 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 TCF15Q12870 199 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 MUC21Q5SSG8 566 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 REG3GQ6UW15 175 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 LINC00527Q9UJ94 153 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 UNC80Q8N2C7 3258 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 C11orf86A6NJI1 115 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 TNFRSF13BO14836 293 aaPredicted RBP2.13□□□□□ -2.07
CHD9-202ENST00000398510 BTCP35070 178 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 RNASE7Q9H1E1 156 aaKnown RBP2.13□□□□□ -2.07
CHD9-202ENST00000398510 IGHV3OR16-13A0A075B7E8 117 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 IGHV3-74A0A0B4J1X5 117 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 KIR3DS1Q14943 382 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 MORN5Q5VZ52 161 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 PRO1854Q9UHT4 67 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 DNAH14Q0VDD8 3507 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 C4orf51C9J302 202 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 J3QQQ9 107 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 CRYGDP07320 174 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 FOXA3P55318 350 aaPredicted RBP2.13□□□□□ -2.07
CHD9-202ENST00000398510 PYY3Q5JQD4 70 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 NOP10Q9NPE3 64 aaKnown RBP2.13□□□□□ -2.07
CHD9-202ENST00000398510 IGHV3-66A0A0C4DH42 116 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 NDPQ00604 133 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 EXOC3-AS1Q8N2X6 119 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 FGF23Q9GZV9 251 aaPredicted RBP2.13□□□□□ -2.07
CHD9-202ENST00000398510 SCRT2Q9NQ03 307 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 RPL37AP8A6NKH3 93 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 ZNRF2Q8NHG8 242 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 DMDP11532 3685 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 XIRP2A4UGR9 3374 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 HIST1H2BKO60814 126 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 FRYLO94915 3013 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 IGHV3-23P01764 117 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 HIST1H2BJP06899 126 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 IGF2RP11717 2491 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 DSPP15924 2871 aaKnown RBP2.12□□□□□ -2.07
CHD9-202ENST00000398510 HIST1H2BOP23527 126 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 LOXP28300 417 aaPredicted RBP2.12□□□□□ -2.07
CHD9-202ENST00000398510 HIST1H2BBP33778 126 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 HIST1H2BDP58876 126 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 HIST1H2BCP62807 126 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 HIST2H2BEQ16778 126 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.12□□□□□ -2.07
CHD9-202ENST00000398510 HIST1H2BHQ93079 126 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 HIST1H2BNQ99877 126 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 HIST1H2BMQ99879 126 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 POLR3KQ9Y2Y1 108 aaPredicted RBP2.12□□□□□ -2.07
CHD9-202ENST00000398510 UFSP1Q6NVU6 142 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 MDFICQ9P1T7 246 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 TINCRA0A1B0GVN0 87 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 NPC2P61916 151 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 DMRTC1Q5HYR2 192 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 Q6ZRM9 215 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 USP17L23D6RBM5 183 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 SPINK2P20155 84 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 RPL28P46779 137 aaKnown RBP2.12□□□□□ -2.07
CHD9-202ENST00000398510 Q6P435 159 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 IGHV3-49A0A0A0MS15 119 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 TRBV6-1A0A0K0K1D8 114 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 E7EUB6 86 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 TAX1BP3O14907 124 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 EDN2P20800 178 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 ANXA2RQ3ZCQ2 193 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 Q6JHZ5 121 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 GUSBP1Q15486 140 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 OXLD1Q5BKU9 147 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 UBE2D4Q9Y2X8 147 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 MKI67P46013 3256 aaKnown RBP2.12□□□□□ -2.07
CHD9-202ENST00000398510 TRBV10-2A0A0K0K1G8 114 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 TRBV6-4A0A1B0GX49 114 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 C2orf70A6NJV1 201 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 IGF1P05019 195 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 UBE2D3P61077 147 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 GNG5P63218 68 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 NREPQ16612 68 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 C1orf229Q6ZS94 237 aaPredicted RBP2.12□□□□□ -2.07
CHD9-202ENST00000398510 V9GYV3 84 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 FN1P02751 2386 aaKnown RBP2.12□□□□□ -2.07
CHD9-202ENST00000398510 IGHV3-73A0A0B4J1V6 119 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 IBA57-AS1B1ANH7 110 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 ZFHX4Q86UP3 3567 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 IGLV11-55A0A075B6I3 123 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 IGKV1-9A0A0C4DH69 117 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 K7EN84 100 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 PIEZO2Q9H5I5 2752 aa2.12□□□□□ -2.07
CHD9-202ENST00000398510 CENPVL1A0A0U1RR11 272 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms