RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 MUC21Q5SSG8 566 aa14.29□□□□□ -0.12
PDLIM2-204ENST00000397760 FAM19A4Q96LR4 140 aa14.29□□□□□ -0.12
PDLIM2-204ENST00000397760 MSRB1Q9NZV6 116 aa14.29□□□□□ -0.12
PDLIM2-204ENST00000397760 OR11H12B2RN74 326 aa14.28□□□□□ -0.12
PDLIM2-204ENST00000397760 SMKR1H3BMG3 65 aa14.28□□□□□ -0.12
PDLIM2-204ENST00000397760 CCL25O15444 150 aa14.28□□□□□ -0.12
PDLIM2-204ENST00000397760 SNAI2O43623 268 aa14.28□□□□□ -0.12
PDLIM2-204ENST00000397760 IGKV3-20P01619 116 aa14.28□□□□□ -0.12
PDLIM2-204ENST00000397760 FGF6P10767 208 aa14.28□□□□□ -0.12
PDLIM2-204ENST00000397760 CMC4P56277 68 aaPredicted RBP14.28□□□□□ -0.12
PDLIM2-204ENST00000397760 C2orf91Q6ZV80 131 aa14.28□□□□□ -0.12
PDLIM2-204ENST00000397760 BOD1L2Q8IYS8 172 aa14.28□□□□□ -0.12
PDLIM2-204ENST00000397760 TAX1BP3O14907 124 aa14.27□□□□□ -0.12
PDLIM2-204ENST00000397760 Q8N8P6 123 aa14.27□□□□□ -0.12
PDLIM2-204ENST00000397760 TRBV7-9A0A0J9YWB2 115 aa14.27□□□□□ -0.13
PDLIM2-204ENST00000397760 CD7P09564 240 aa14.27□□□□□ -0.13
PDLIM2-204ENST00000397760 HLA-DRB4P13762 266 aa14.27□□□□□ -0.13
PDLIM2-204ENST00000397760 ZFAND2AQ8N6M9 145 aa14.27□□□□□ -0.13
PDLIM2-204ENST00000397760 HLA-DRB4X5D2U9 266 aa14.27□□□□□ -0.13
PDLIM2-204ENST00000397760 H3BMM0 161 aa14.26□□□□□ -0.13
PDLIM2-204ENST00000397760 J3KRW8 73 aa14.26□□□□□ -0.13
PDLIM2-204ENST00000397760 SORL1Q92673 2214 aa14.26□□□□□ -0.13
PDLIM2-204ENST00000397760 VWFP04275 2813 aa14.25□□□□□ -0.13
PDLIM2-204ENST00000397760 ANKRD39Q53RE8 183 aa14.25□□□□□ -0.13
PDLIM2-204ENST00000397760 ODF3Q96PU9 254 aa14.25□□□□□ -0.13
PDLIM2-204ENST00000397760 C11orf21Q9P2W6 132 aa14.25□□□□□ -0.13
PDLIM2-204ENST00000397760 TP73-AS1Q9UF72 201 aa14.25□□□□□ -0.13
PDLIM2-204ENST00000397760 PRR9Q5T870 116 aa14.25□□□□□ -0.13
PDLIM2-204ENST00000397760 MDFIQ99750 246 aa14.25□□□□□ -0.13
PDLIM2-204ENST00000397760 FAM110AQ9BQ89 295 aa14.25□□□□□ -0.13
PDLIM2-204ENST00000397760 ZMAT4Q9H898 229 aa14.25□□□□□ -0.13
PDLIM2-204ENST00000397760 IGLV2-18A0A075B6J9 118 aa14.24□□□□□ -0.13
PDLIM2-204ENST00000397760 ATP5LO75964 103 aa14.24□□□□□ -0.13
PDLIM2-204ENST00000397760 LEPP41159 167 aa14.24□□□□□ -0.13
PDLIM2-204ENST00000397760 TMEM97Q5BJF2 176 aa14.24□□□□□ -0.13
PDLIM2-204ENST00000397760 K7EP13 123 aa14.23□□□□□ -0.13
PDLIM2-204ENST00000397760 MRAP2Q96G30 205 aa14.23□□□□□ -0.13
PDLIM2-204ENST00000397760 C19orf73Q9NVV2 129 aa14.23□□□□□ -0.13
PDLIM2-204ENST00000397760 TRRAPQ9Y4A5 3859 aa14.22□□□□□ -0.13
PDLIM2-204ENST00000397760 A8MTW9 85 aa14.22□□□□□ -0.13
PDLIM2-204ENST00000397760 RNASE4P34096 147 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-204ENST00000397760 KIR3DS1Q14943 382 aa14.22□□□□□ -0.13
PDLIM2-204ENST00000397760 VAMP3Q15836 100 aa14.22□□□□□ -0.13
PDLIM2-204ENST00000397760 AMTNQ6UX39 209 aa14.22□□□□□ -0.13
PDLIM2-204ENST00000397760 COL6A5A8TX70 2615 aa14.22□□□□□ -0.13
PDLIM2-204ENST00000397760 KLLNB2CW77 178 aa14.22□□□□□ -0.13
PDLIM2-204ENST00000397760 MED14OSP0DP75 135 aa14.22□□□□□ -0.13
PDLIM2-204ENST00000397760 WIPF1O43516 503 aa14.21□□□□□ -0.13
PDLIM2-204ENST00000397760 HSD52Q0P140 79 aa14.21□□□□□ -0.13
PDLIM2-204ENST00000397760 Q6ZVH6 145 aa14.21□□□□□ -0.13
PDLIM2-204ENST00000397760 STHQ8IWL8 128 aa14.21□□□□□ -0.13
PDLIM2-204ENST00000397760 CBY1Q9Y3M2 126 aa14.21□□□□□ -0.13
PDLIM2-204ENST00000397760 STAB1Q9NY15 2570 aa14.21□□□□□ -0.14
PDLIM2-204ENST00000397760 RBMY1BA6NDE4 496 aaKnown RBP14.2□□□□□ -0.14
PDLIM2-204ENST00000397760 RBMY1EA6NEQ0 496 aaKnown RBP14.2□□□□□ -0.14
PDLIM2-204ENST00000397760 RBMY1DP0C7P1 496 aaKnown RBP14.2□□□□□ -0.14
PDLIM2-204ENST00000397760 CDKN1BP46527 198 aa14.2□□□□□ -0.14
PDLIM2-204ENST00000397760 SPINK13Q1W4C9 94 aa14.2□□□□□ -0.14
PDLIM2-204ENST00000397760 Q6ZQT7 251 aa14.2□□□□□ -0.14
PDLIM2-204ENST00000397760 GTSCR1Q86UQ5 136 aa14.2□□□□□ -0.14
PDLIM2-204ENST00000397760 NRACQ8N912 160 aa14.2□□□□□ -0.14
PDLIM2-204ENST00000397760 WFDC10AQ9H1F0 79 aa14.2□□□□□ -0.14
PDLIM2-204ENST00000397760 TRAV21A0A0B4J279 112 aa14.2□□□□□ -0.14
PDLIM2-204ENST00000397760 A6NDN8 102 aa14.2□□□□□ -0.14
PDLIM2-204ENST00000397760 EVI2AP22794 236 aa14.2□□□□□ -0.14
PDLIM2-204ENST00000397760 ODF1Q14990 250 aa14.2□□□□□ -0.14
PDLIM2-204ENST00000397760 SPANXN1Q5VSR9 72 aa14.2□□□□□ -0.14
PDLIM2-204ENST00000397760 OR4C5Q8NGB2 326 aa14.2□□□□□ -0.14
PDLIM2-204ENST00000397760 TRAV12-2A0A075B6T6 113 aa14.19□□□□□ -0.14
PDLIM2-204ENST00000397760 K7EMI3 77 aa14.19□□□□□ -0.14
PDLIM2-204ENST00000397760 FXYD7P58549 80 aa14.19□□□□□ -0.14
PDLIM2-204ENST00000397760 CLUHP3Q96NS8 147 aa14.19□□□□□ -0.14
PDLIM2-204ENST00000397760 GAS8-AS1O95177 125 aa14.18□□□□□ -0.14
PDLIM2-204ENST00000397760 LAGE3Q14657 143 aa14.18□□□□□ -0.14
PDLIM2-204ENST00000397760 TRPT1Q86TN4 253 aaKnown RBP14.18□□□□□ -0.14
PDLIM2-204ENST00000397760 OXLD1Q5BKU9 147 aa14.18□□□□□ -0.14
PDLIM2-204ENST00000397760 HIGD1BQ9P298 99 aa14.18□□□□□ -0.14
PDLIM2-204ENST00000397760 DKK2Q9UBU2 259 aa14.18□□□□□ -0.14
PDLIM2-204ENST00000397760 AGRNO00468 2067 aa14.17□□□□□ -0.14
PDLIM2-204ENST00000397760 NOTCH3Q9UM47 2321 aa14.17□□□□□ -0.14
PDLIM2-204ENST00000397760 C7orf71A4D174 169 aa14.17□□□□□ -0.14
PDLIM2-204ENST00000397760 TRAV12-3A0A0B4J271 114 aa14.16□□□□□ -0.14
PDLIM2-204ENST00000397760 H3BRM9 83 aa14.16□□□□□ -0.14
PDLIM2-204ENST00000397760 IGKCP01834 107 aa14.16□□□□□ -0.14
PDLIM2-204ENST00000397760 PRSS1P07477 247 aa14.16□□□□□ -0.14
PDLIM2-204ENST00000397760 SMIM17P0DL12 118 aa14.16□□□□□ -0.14
PDLIM2-204ENST00000397760 HHLA3Q9XRX5 114 aa14.16□□□□□ -0.14
PDLIM2-204ENST00000397760 DPM2O94777 84 aa14.15□□□□□ -0.14
PDLIM2-204ENST00000397760 GATA1P15976 413 aaPredicted RBP14.15□□□□□ -0.14
PDLIM2-204ENST00000397760 C18orf15Q96N68 181 aa14.15□□□□□ -0.14
PDLIM2-204ENST00000397760 C20orf78Q9BR46 151 aa14.15□□□□□ -0.14
PDLIM2-204ENST00000397760 H3BVH4 76 aa14.14□□□□□ -0.15
PDLIM2-204ENST00000397760 ASIPP42127 132 aa14.14□□□□□ -0.15
PDLIM2-204ENST00000397760 CBY3A6NI87 242 aa14.13□□□□□ -0.15
PDLIM2-204ENST00000397760 M0R381 172 aa14.13□□□□□ -0.15
PDLIM2-204ENST00000397760 PPP1R17O96001 155 aa14.13□□□□□ -0.15
PDLIM2-204ENST00000397760 NMUP48645 174 aa14.13□□□□□ -0.15
PDLIM2-204ENST00000397760 ANXA2RQ3ZCQ2 193 aa14.13□□□□□ -0.15
PDLIM2-204ENST00000397760 SMIM2Q9BVW6 85 aa14.13□□□□□ -0.15
PDLIM2-204ENST00000397760 DPH3P1Q9H4G8 78 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms