RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 CIDEAO60543 219 aa11.07□□□□□ -0.64
VAMP1-202ENST00000396308 PPP1R17O96001 155 aa11.07□□□□□ -0.64
VAMP1-202ENST00000396308 KIAA1644Q3SXP7 199 aa11.07□□□□□ -0.64
VAMP1-202ENST00000396308 MRPL51Q4U2R6 128 aaKnown RBP11.07□□□□□ -0.64
VAMP1-202ENST00000396308 Q6ZTI0 123 aa11.07□□□□□ -0.64
VAMP1-202ENST00000396308 OR4C5Q8NGB2 326 aa11.07□□□□□ -0.64
VAMP1-202ENST00000396308 MEGF8Q7Z7M0 2845 aa11.06□□□□□ -0.64
VAMP1-202ENST00000396308 TRAV4A0A0B4J268 109 aa11.06□□□□□ -0.64
VAMP1-202ENST00000396308 GAGE12BA1L429 117 aa11.06□□□□□ -0.64
VAMP1-202ENST00000396308 GAGE7O76087 117 aa11.06□□□□□ -0.64
VAMP1-202ENST00000396308 GAGE12FP0CL80 117 aa11.06□□□□□ -0.64
VAMP1-202ENST00000396308 GAGE12GP0CL81 117 aa11.06□□□□□ -0.64
VAMP1-202ENST00000396308 GAGE12IP0CL82 117 aa11.06□□□□□ -0.64
VAMP1-202ENST00000396308 RAB4AP20338 218 aa11.06□□□□□ -0.64
VAMP1-202ENST00000396308 SRIP30626 198 aa11.06□□□□□ -0.64
VAMP1-202ENST00000396308 Q8NAQ8 132 aa11.06□□□□□ -0.64
VAMP1-202ENST00000396308 RETNQ9HD89 108 aa11.06□□□□□ -0.64
VAMP1-202ENST00000396308 LAMTOR2Q9Y2Q5 125 aa11.06□□□□□ -0.64
VAMP1-202ENST00000396308 TRRAPQ9Y4A5 3859 aa11.06□□□□□ -0.64
VAMP1-202ENST00000396308 D6R8Y8 96 aa11.05□□□□□ -0.64
VAMP1-202ENST00000396308 RS1O15537 224 aa11.05□□□□□ -0.64
VAMP1-202ENST00000396308 S100A6P06703 90 aa11.05□□□□□ -0.64
VAMP1-202ENST00000396308 SPART-AS1P0CW21 52 aa11.05□□□□□ -0.64
VAMP1-202ENST00000396308 ZFP2Q6ZN57 461 aa11.05□□□□□ -0.64
VAMP1-202ENST00000396308 SBSPONQ8IVN8 264 aa11.05□□□□□ -0.64
VAMP1-202ENST00000396308 PRELID3AQ96N28 172 aa11.05□□□□□ -0.64
VAMP1-202ENST00000396308 JPT2Q9H910 190 aa11.05□□□□□ -0.64
VAMP1-202ENST00000396308 FAM222AQ5U5X8 452 aa11.04□□□□□ -0.64
VAMP1-202ENST00000396308 CFAP126Q5VTH2 177 aa11.04□□□□□ -0.64
VAMP1-202ENST00000396308 RNF185Q96GF1 192 aa11.04□□□□□ -0.64
VAMP1-202ENST00000396308 C11orf68Q9H3H3 251 aaKnown RBP11.04□□□□□ -0.64
VAMP1-202ENST00000396308 HIST1H2BKO60814 126 aa11.03□□□□□ -0.64
VAMP1-202ENST00000396308 HIST1H2BJP06899 126 aa11.03□□□□□ -0.64
VAMP1-202ENST00000396308 CRYGDP07320 174 aa11.03□□□□□ -0.64
VAMP1-202ENST00000396308 DEFB130BP0DP73 79 aa11.03□□□□□ -0.64
VAMP1-202ENST00000396308 DEFB130AP0DP74 79 aa11.03□□□□□ -0.64
VAMP1-202ENST00000396308 HIST1H2BOP23527 126 aa11.03□□□□□ -0.64
VAMP1-202ENST00000396308 HIST1H2BBP33778 126 aa11.03□□□□□ -0.64
VAMP1-202ENST00000396308 HIST1H2BDP58876 126 aa11.03□□□□□ -0.64
VAMP1-202ENST00000396308 DAD1P61803 113 aa11.03□□□□□ -0.64
VAMP1-202ENST00000396308 HIST1H2BCP62807 126 aa11.03□□□□□ -0.64
VAMP1-202ENST00000396308 HIST2H2BEQ16778 126 aa11.03□□□□□ -0.64
VAMP1-202ENST00000396308 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.03□□□□□ -0.64
VAMP1-202ENST00000396308 HIST1H2BHQ93079 126 aa11.03□□□□□ -0.64
VAMP1-202ENST00000396308 HIST1H2BNQ99877 126 aa11.03□□□□□ -0.64
VAMP1-202ENST00000396308 HIST1H2BMQ99879 126 aa11.03□□□□□ -0.64
VAMP1-202ENST00000396308 TM2D3Q9BRN9 247 aa11.03□□□□□ -0.64
VAMP1-202ENST00000396308 ALKBH7Q9BT30 221 aaPredicted RBP11.03□□□□□ -0.64
VAMP1-202ENST00000396308 KIF25-AS1Q9Y6Z4 181 aa11.03□□□□□ -0.64
VAMP1-202ENST00000396308 PHOX2AO14813 284 aa11.02□□□□□ -0.65
VAMP1-202ENST00000396308 DEFB4AO15263 64 aa11.02□□□□□ -0.65
VAMP1-202ENST00000396308 NCR2O95944 276 aa11.02□□□□□ -0.65
VAMP1-202ENST00000396308 OR10J3Q5JRS4 329 aa11.02□□□□□ -0.65
VAMP1-202ENST00000396308 SAMD10Q9BYL1 202 aa11.02□□□□□ -0.65
VAMP1-202ENST00000396308 MAP1LC3AQ9H492 121 aa11.02□□□□□ -0.65
VAMP1-202ENST00000396308 DKK2Q9UBU2 259 aa11.02□□□□□ -0.65
VAMP1-202ENST00000396308 U3KQK5 164 aa11.02□□□□□ -0.65
VAMP1-202ENST00000396308 IGHV3-73A0A0B4J1V6 119 aa11.01□□□□□ -0.65
VAMP1-202ENST00000396308 TRGV4A0A0C4DH28 118 aa11.01□□□□□ -0.65
VAMP1-202ENST00000396308 SUMO4Q6EEV6 95 aa11.01□□□□□ -0.65
VAMP1-202ENST00000396308 BAGE3Q86Y29 109 aa11.01□□□□□ -0.65
VAMP1-202ENST00000396308 LINC00612Q8N6U2 182 aa11.01□□□□□ -0.65
VAMP1-202ENST00000396308 POM121L12Q8N7R1 296 aa11.01□□□□□ -0.65
VAMP1-202ENST00000396308 B9D2Q9BPU9 175 aa11.01□□□□□ -0.65
VAMP1-202ENST00000396308 NACAE9PAV3 2078 aa11□□□□□ -0.65
VAMP1-202ENST00000396308 TRAV26-2A0A0B4J265 109 aa11□□□□□ -0.65
VAMP1-202ENST00000396308 SMKR1H3BMG3 65 aa11□□□□□ -0.65
VAMP1-202ENST00000396308 IGHV3-53P01767 116 aa11□□□□□ -0.65
VAMP1-202ENST00000396308 C18orf15Q96N68 181 aa11□□□□□ -0.65
VAMP1-202ENST00000396308 TNFRSF6BO95407 300 aa10.99□□□□□ -0.65
VAMP1-202ENST00000396308 PMCHP20382 165 aa10.99□□□□□ -0.65
VAMP1-202ENST00000396308 NDUFA6P56556 154 aa10.99□□□□□ -0.65
VAMP1-202ENST00000396308 C18orf32Q8TCD1 76 aa10.99□□□□□ -0.65
VAMP1-202ENST00000396308 NPYP01303 97 aa10.98□□□□□ -0.65
VAMP1-202ENST00000396308 LINC00315P59091 139 aa10.98□□□□□ -0.65
VAMP1-202ENST00000396308 Q0VG73 95 aa10.98□□□□□ -0.65
VAMP1-202ENST00000396308 UFSP1Q6NVU6 142 aa10.98□□□□□ -0.65
VAMP1-202ENST00000396308 PRSS3P2Q8NHM4 247 aa10.98□□□□□ -0.65
VAMP1-202ENST00000396308 ZNF479Q96JC4 524 aa10.98□□□□□ -0.65
VAMP1-202ENST00000396308 EDA2RQ9HAV5 297 aa10.98□□□□□ -0.65
VAMP1-202ENST00000396308 ST20Q9HBF5 79 aa10.98□□□□□ -0.65
VAMP1-202ENST00000396308 MGAM2Q2M2H8 2515 aa10.98□□□□□ -0.65
VAMP1-202ENST00000396308 K7EQD1 137 aa10.97□□□□□ -0.65
VAMP1-202ENST00000396308 ATP5G1P05496 136 aa10.97□□□□□ -0.65
VAMP1-202ENST00000396308 DEFA6Q01524 100 aa10.97□□□□□ -0.65
VAMP1-202ENST00000396308 FA2HQ7L5A8 372 aa10.97□□□□□ -0.65
VAMP1-202ENST00000396308 C20orf78Q9BR46 151 aa10.97□□□□□ -0.65
VAMP1-202ENST00000396308 NXT2Q9NPJ8 142 aaKnown RBP10.97□□□□□ -0.65
VAMP1-202ENST00000396308 TNFRSF18Q9Y5U5 241 aa10.97□□□□□ -0.65
VAMP1-202ENST00000396308 NOTCH1P46531 2555 aa10.96□□□□□ -0.65
VAMP1-202ENST00000396308 A0A0J9YWU9 116 aa10.96□□□□□ -0.65
VAMP1-202ENST00000396308 TRBV10-1A0A0K0K1A3 114 aa10.96□□□□□ -0.65
VAMP1-202ENST00000396308 M0QY20 66 aa10.96□□□□□ -0.65
VAMP1-202ENST00000396308 NHLRC4P0CG21 123 aaPredicted RBP10.96□□□□□ -0.65
VAMP1-202ENST00000396308 SUMO2P61956 95 aaKnown RBP10.96□□□□□ -0.65
VAMP1-202ENST00000396308 RHOHQ15669 191 aa10.96□□□□□ -0.65
VAMP1-202ENST00000396308 RNASEKQ6P5S7 137 aaKnown RBP10.96□□□□□ -0.65
VAMP1-202ENST00000396308 DNAJC30Q96LL9 226 aa10.96□□□□□ -0.65
VAMP1-202ENST00000396308 PRADC1Q9BSG0 188 aa10.96□□□□□ -0.65
VAMP1-202ENST00000396308 NIT2Q9NQR4 276 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms