RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 WFDC5Q8TCV5 224 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 OPRPNQ99935 248 aaPredicted RBP2.68□□□□□ -1.98
XRCC4-203ENST00000396027 LIMD2Q9BT23 127 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 PHLDA3Q9Y5J5 127 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 SMAD5-AS1Q9Y6J3 95 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 EML6Q6ZMW3 1958 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 F6UB75 175 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 VCYO14598 125 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 MIFP14174 115 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 CRIP2P52943 208 aaPredicted RBP2.68□□□□□ -1.98
XRCC4-203ENST00000396027 SUMO2P61956 95 aaKnown RBP2.68□□□□□ -1.98
XRCC4-203ENST00000396027 MIAQ16674 131 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 SPANXN1Q5VSR9 72 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 TMEM61Q8N0U2 210 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 OBSCN-AS1Q96MR7 158 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 RBM12B-AS1Q9P1G2 102 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 LENEPQ9Y5L5 61 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 COL5A1P20908 1838 aaPredicted RBP2.68□□□□□ -1.98
XRCC4-203ENST00000396027 EP400Q96L91 3159 aa2.67□□□□□ -1.98
XRCC4-203ENST00000396027 LRRK1Q38SD2 2015 aa2.67□□□□□ -1.98
XRCC4-203ENST00000396027 CACNA1IQ9P0X4 2223 aa2.67□□□□□ -1.98
XRCC4-203ENST00000396027 IGKV1-27A0A075B6S5 117 aa2.67□□□□□ -1.98
XRCC4-203ENST00000396027 TRAV8-3A0A0A6YYJ7 113 aa2.67□□□□□ -1.98
XRCC4-203ENST00000396027 LOC101059948A0A1B0GTJ6 334 aa2.67□□□□□ -1.98
XRCC4-203ENST00000396027 M0R378 163 aa2.67□□□□□ -1.98
XRCC4-203ENST00000396027 IGHV3-13P01766 116 aa2.67□□□□□ -1.98
XRCC4-203ENST00000396027 PRSS2P07478 247 aa2.67□□□□□ -1.98
XRCC4-203ENST00000396027 GYPEP15421 78 aa2.67□□□□□ -1.98
XRCC4-203ENST00000396027 KIAA0087Q14695 138 aa2.67□□□□□ -1.98
XRCC4-203ENST00000396027 LY6G5CQ5SRR4 150 aa2.67□□□□□ -1.98
XRCC4-203ENST00000396027 HIST2H2BCQ6DN03 193 aa2.67□□□□□ -1.98
XRCC4-203ENST00000396027 HIST2H2BDQ6DRA6 164 aa2.67□□□□□ -1.98
XRCC4-203ENST00000396027 CXCL17Q6UXB2 119 aa2.67□□□□□ -1.98
XRCC4-203ENST00000396027 PRNTQ86SH4 94 aa2.67□□□□□ -1.98
XRCC4-203ENST00000396027 DIRC1Q969H9 104 aa2.67□□□□□ -1.98
XRCC4-203ENST00000396027 CCL13Q99616 98 aa2.67□□□□□ -1.98
XRCC4-203ENST00000396027 CXXC4Q9H2H0 198 aa2.67□□□□□ -1.98
XRCC4-203ENST00000396027 MRPL36Q9P0J6 103 aaKnown RBP2.67□□□□□ -1.98
XRCC4-203ENST00000396027 SPRR3Q9UBC9 169 aa2.67□□□□□ -1.98
XRCC4-203ENST00000396027 MYO7BQ6PIF6 2116 aa2.66□□□□□ -1.98
XRCC4-203ENST00000396027 MYOFQ9NZM1 2061 aa2.66□□□□□ -1.98
XRCC4-203ENST00000396027 IGHV4OR15-8A0A075B7B6 117 aa2.66□□□□□ -1.98
XRCC4-203ENST00000396027 IGHV3OR16-10A0A075B7F0 116 aa2.66□□□□□ -1.98
XRCC4-203ENST00000396027 A0A087WW49 117 aa2.66□□□□□ -1.98
XRCC4-203ENST00000396027 IGIPA6NJ69 53 aa2.66□□□□□ -1.98
XRCC4-203ENST00000396027 I3L3M4 83 aa2.66□□□□□ -1.98
XRCC4-203ENST00000396027 TMEM256-PLSCR3K7ERE1 68 aa2.66□□□□□ -1.98
XRCC4-203ENST00000396027 NTN3O00634 580 aaPredicted RBP2.66□□□□□ -1.98
XRCC4-203ENST00000396027 IGLV2-11P01706 119 aa2.66□□□□□ -1.98
XRCC4-203ENST00000396027 IGKV3-11P04433 115 aa2.66□□□□□ -1.98
XRCC4-203ENST00000396027 IGHV4-34P06331 123 aa2.66□□□□□ -1.98
XRCC4-203ENST00000396027 DEFA4P12838 97 aa2.66□□□□□ -1.98
XRCC4-203ENST00000396027 C2orf66Q6UXQ4 117 aa2.66□□□□□ -1.98
XRCC4-203ENST00000396027 GFRALQ6UXV0 394 aa2.66□□□□□ -1.98
XRCC4-203ENST00000396027 C7orf65Q6ZTY9 151 aa2.66□□□□□ -1.98
XRCC4-203ENST00000396027 NOTCH2NLQ7Z3S9 236 aa2.66□□□□□ -1.98
XRCC4-203ENST00000396027 MUSTN1Q8IVN3 82 aa2.66□□□□□ -1.98
XRCC4-203ENST00000396027 SMCR5Q8TEV8 140 aa2.66□□□□□ -1.98
XRCC4-203ENST00000396027 KRTAP4-3Q9BYR4 195 aa2.66□□□□□ -1.98
XRCC4-203ENST00000396027 CTSZQ9UBR2 303 aa2.66□□□□□ -1.98
XRCC4-203ENST00000396027 RAI1Q7Z5J4 1906 aaPredicted RBP2.65□□□□□ -1.98
XRCC4-203ENST00000396027 DYSFO75923 2080 aa2.65□□□□□ -1.99
XRCC4-203ENST00000396027 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.99
XRCC4-203ENST00000396027 C4orf51C9J302 202 aa2.65□□□□□ -1.99
XRCC4-203ENST00000396027 F8WEM9 126 aa2.65□□□□□ -1.99
XRCC4-203ENST00000396027 H0YGG7 62 aa2.65□□□□□ -1.99
XRCC4-203ENST00000396027 K7EMT4 169 aa2.65□□□□□ -1.99
XRCC4-203ENST00000396027 ZNF73O43830 326 aaPredicted RBP2.65□□□□□ -1.99
XRCC4-203ENST00000396027 FSTL3O95633 263 aa2.65□□□□□ -1.99
XRCC4-203ENST00000396027 IGHV3-9P01782 118 aa2.65□□□□□ -1.99
XRCC4-203ENST00000396027 CCL4P13236 92 aa2.65□□□□□ -1.99
XRCC4-203ENST00000396027 CD59P13987 128 aa2.65□□□□□ -1.99
XRCC4-203ENST00000396027 RPL28P46779 137 aaKnown RBP2.65□□□□□ -1.99
XRCC4-203ENST00000396027 CLEC19AQ6UXS0 136 aa2.65□□□□□ -1.99
XRCC4-203ENST00000396027 LINC00322Q6ZN03 302 aaPredicted RBP2.65□□□□□ -1.99
XRCC4-203ENST00000396027 C16orf47Q6ZP98 133 aaPredicted RBP2.65□□□□□ -1.99
XRCC4-203ENST00000396027 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
XRCC4-203ENST00000396027 ZNF491Q8N8L2 437 aa2.65□□□□□ -1.99
XRCC4-203ENST00000396027 LINC01560Q8TB33 94 aa2.65□□□□□ -1.99
XRCC4-203ENST00000396027 ZNF524Q96C55 264 aa2.65□□□□□ -1.99
XRCC4-203ENST00000396027 RNF185Q96GF1 192 aa2.65□□□□□ -1.99
XRCC4-203ENST00000396027 C17orf77Q96MU5 243 aa2.65□□□□□ -1.99
XRCC4-203ENST00000396027 TTTY13Q9BZ97 58 aa2.65□□□□□ -1.99
XRCC4-203ENST00000396027 A0A087WZ39 114 aa2.64□□□□□ -1.99
XRCC4-203ENST00000396027 IGKV1D-43A0A0B4J1Z2 117 aa2.64□□□□□ -1.99
XRCC4-203ENST00000396027 IGHV5-51A0A0C4DH38 117 aa2.64□□□□□ -1.99
XRCC4-203ENST00000396027 ZFP36P26651 326 aaKnown RBP2.64□□□□□ -1.99
XRCC4-203ENST00000396027 FUSP35637 526 aaKnown RBP eCLIP2.64□□□□□ -1.99
XRCC4-203ENST00000396027 ELOF1P60002 83 aaKnown RBP2.64□□□□□ -1.99
XRCC4-203ENST00000396027 C19orf54Q5BKX5 351 aa2.64□□□□□ -1.99
XRCC4-203ENST00000396027 FAM74A4Q5TZK3 123 aa2.64□□□□□ -1.99
XRCC4-203ENST00000396027 FAM223AQ8IWN6 122 aa2.64□□□□□ -1.99
XRCC4-203ENST00000396027 RNASE6Q93091 150 aaKnown RBP2.64□□□□□ -1.99
XRCC4-203ENST00000396027 Q9H8V8 135 aa2.64□□□□□ -1.99
XRCC4-203ENST00000396027 NDUFA4L2Q9NRX3 87 aa2.64□□□□□ -1.99
XRCC4-203ENST00000396027 LINC00588Q9Y4M8 146 aa2.64□□□□□ -1.99
XRCC4-203ENST00000396027 NACAE9PAV3 2078 aa2.64□□□□□ -1.99
XRCC4-203ENST00000396027 USF3Q68DE3 2245 aa2.64□□□□□ -1.99
XRCC4-203ENST00000396027 POLEQ07864 2286 aa2.64□□□□□ -1.99
XRCC4-203ENST00000396027 ALPK2Q86TB3 2170 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms