RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 PRNTQ86SH4 94 aa6.53□□□□□ -1.36
CCR9-203ENST00000395963 VGLL1Q99990 258 aa6.53□□□□□ -1.36
CCR9-203ENST00000395963 TRAV26-1A0A087WT03 109 aa6.52□□□□□ -1.37
CCR9-203ENST00000395963 TRAV21A0A0B4J279 112 aa6.52□□□□□ -1.37
CCR9-203ENST00000395963 A0A1W2PPM0 123 aa6.52□□□□□ -1.37
CCR9-203ENST00000395963 hDV102S1A0JD36 115 aa6.52□□□□□ -1.37
CCR9-203ENST00000395963 F8W1H4 67 aa6.52□□□□□ -1.37
CCR9-203ENST00000395963 IGFL4Q6B9Z1 124 aa6.52□□□□□ -1.37
CCR9-203ENST00000395963 VCX2Q9H322 139 aa6.52□□□□□ -1.37
CCR9-203ENST00000395963 JMJD1CQ15652 2540 aa6.52□□□□□ -1.37
CCR9-203ENST00000395963 GAGE12HA6NDE8 117 aa6.52□□□□□ -1.37
CCR9-203ENST00000395963 FABP5P3A8MUU1 101 aa6.52□□□□□ -1.37
CCR9-203ENST00000395963 CRYBA4P53673 196 aa6.52□□□□□ -1.37
CCR9-203ENST00000395963 APOC4P55056 127 aa6.52□□□□□ -1.37
CCR9-203ENST00000395963 RNASEKQ6P5S7 137 aaKnown RBP6.52□□□□□ -1.37
CCR9-203ENST00000395963 MRPL16Q9NX20 251 aaKnown RBP6.52□□□□□ -1.37
CCR9-203ENST00000395963 SPCS1Q9Y6A9 102 aa6.52□□□□□ -1.37
CCR9-203ENST00000395963 FBN1P35555 2871 aaKnown RBP6.51□□□□□ -1.37
CCR9-203ENST00000395963 C19orf71A6NCJ1 209 aa6.51□□□□□ -1.37
CCR9-203ENST00000395963 Q8N1Y9 231 aa6.51□□□□□ -1.37
CCR9-203ENST00000395963 ZFAND2AQ8N6M9 145 aa6.51□□□□□ -1.37
CCR9-203ENST00000395963 DAZAP1Q96EP5 407 aaKnown RBP6.51□□□□□ -1.37
CCR9-203ENST00000395963 NAA38Q9BRA0 125 aaKnown RBP6.51□□□□□ -1.37
CCR9-203ENST00000395963 INSP01308 110 aa6.51□□□□□ -1.37
CCR9-203ENST00000395963 CD7P09564 240 aa6.51□□□□□ -1.37
CCR9-203ENST00000395963 MED14OSP0DP75 135 aa6.51□□□□□ -1.37
CCR9-203ENST00000395963 TCL1AP56279 114 aa6.51□□□□□ -1.37
CCR9-203ENST00000395963 C2orf91Q6ZV80 131 aa6.51□□□□□ -1.37
CCR9-203ENST00000395963 LINC00479Q96M42 142 aa6.51□□□□□ -1.37
CCR9-203ENST00000395963 GFRA4Q9GZZ7 299 aa6.51□□□□□ -1.37
CCR9-203ENST00000395963 TRAV8-1A0A0A6YYK1 113 aa6.5□□□□□ -1.37
CCR9-203ENST00000395963 TSPAN13O95857 204 aa6.5□□□□□ -1.37
CCR9-203ENST00000395963 SLAQ13239 276 aa6.5□□□□□ -1.37
CCR9-203ENST00000395963 LINC01559Q495D7 138 aa6.5□□□□□ -1.37
CCR9-203ENST00000395963 A0A1B0GXF2 115 aa6.5□□□□□ -1.37
CCR9-203ENST00000395963 ERCC8Q13216 396 aa6.5□□□□□ -1.37
CCR9-203ENST00000395963 ATRQ13535 2644 aa6.5□□□□□ -1.37
CCR9-203ENST00000395963 KNCNA6PVL3 124 aa6.49□□□□□ -1.37
CCR9-203ENST00000395963 F6UB75 175 aa6.49□□□□□ -1.37
CCR9-203ENST00000395963 P01737 135 aa6.49□□□□□ -1.37
CCR9-203ENST00000395963 MGST1P10620 155 aaKnown RBP6.49□□□□□ -1.37
CCR9-203ENST00000395963 GDF5OSQ5U4N7 250 aa6.49□□□□□ -1.37
CCR9-203ENST00000395963 LINC00322Q6ZN03 302 aaPredicted RBP6.49□□□□□ -1.37
CCR9-203ENST00000395963 IGHV1-24A0A0C4DH33 117 aa6.49□□□□□ -1.37
CCR9-203ENST00000395963 HBBP68871 147 aa6.49□□□□□ -1.37
CCR9-203ENST00000395963 KIR3DS1Q14943 382 aa6.49□□□□□ -1.37
CCR9-203ENST00000395963 OXLD1Q5BKU9 147 aa6.49□□□□□ -1.37
CCR9-203ENST00000395963 BOD1L2Q8IYS8 172 aa6.49□□□□□ -1.37
CCR9-203ENST00000395963 ATP6V0E2Q8NHE4 81 aa6.49□□□□□ -1.37
CCR9-203ENST00000395963 Q8TAT8 98 aa6.49□□□□□ -1.37
CCR9-203ENST00000395963 RPP21Q9H633 154 aaKnown RBP6.49□□□□□ -1.37
CCR9-203ENST00000395963 HIGD1BQ9P298 99 aa6.49□□□□□ -1.37
CCR9-203ENST00000395963 TP53TG1Q9Y2A0 90 aa6.49□□□□□ -1.37
CCR9-203ENST00000395963 ANK2Q01484 3957 aa6.49□□□□□ -1.37
CCR9-203ENST00000395963 A8MWL6 223 aa6.48□□□□□ -1.37
CCR9-203ENST00000395963 H3BUT2 72 aa6.48□□□□□ -1.37
CCR9-203ENST00000395963 LINC00173Q6ZV60 143 aa6.48□□□□□ -1.37
CCR9-203ENST00000395963 RNASE7Q9H1E1 156 aaKnown RBP6.48□□□□□ -1.37
CCR9-203ENST00000395963 TRGV11A0A075B6L2 103 aa6.48□□□□□ -1.37
CCR9-203ENST00000395963 TEX48A0A1B0GUV7 120 aa6.48□□□□□ -1.37
CCR9-203ENST00000395963 A0A1B0GW15 77 aa6.48□□□□□ -1.37
CCR9-203ENST00000395963 SMIM9A6NGZ8 99 aa6.48□□□□□ -1.37
CCR9-203ENST00000395963 SH2D1AO60880 128 aa6.48□□□□□ -1.37
CCR9-203ENST00000395963 FOXA3P55318 350 aaPredicted RBP6.48□□□□□ -1.37
CCR9-203ENST00000395963 ANXA2RQ3ZCQ2 193 aa6.48□□□□□ -1.37
CCR9-203ENST00000395963 GEMIN7Q9H840 131 aaKnown RBP6.48□□□□□ -1.37
CCR9-203ENST00000395963 SNAI2O43623 268 aa6.47□□□□□ -1.37
CCR9-203ENST00000395963 PIK3CD-AS1Q5SR53 167 aa6.47□□□□□ -1.37
CCR9-203ENST00000395963 PTH2Q96A98 100 aa6.47□□□□□ -1.37
CCR9-203ENST00000395963 ZNF479Q96JC4 524 aa6.47□□□□□ -1.37
CCR9-203ENST00000395963 C8orf49Q96NF6 230 aa6.47□□□□□ -1.37
CCR9-203ENST00000395963 RBMY1BA6NDE4 496 aaKnown RBP6.47□□□□□ -1.37
CCR9-203ENST00000395963 RBMY1EA6NEQ0 496 aaKnown RBP6.47□□□□□ -1.37
CCR9-203ENST00000395963 RBMY1DP0C7P1 496 aaKnown RBP6.47□□□□□ -1.37
CCR9-203ENST00000395963 SMIM13P0DJ93 91 aa6.47□□□□□ -1.37
CCR9-203ENST00000395963 FGF6P10767 208 aa6.47□□□□□ -1.37
CCR9-203ENST00000395963 KRTAP10-11P60412 298 aa6.47□□□□□ -1.37
CCR9-203ENST00000395963 RPL24P83731 157 aaKnown RBP6.47□□□□□ -1.37
CCR9-203ENST00000395963 LGALS9BQ3B8N2 356 aa6.47□□□□□ -1.37
CCR9-203ENST00000395963 LGALS9CQ6DKI2 356 aa6.47□□□□□ -1.37
CCR9-203ENST00000395963 FAM159AQ6UWV7 190 aa6.47□□□□□ -1.37
CCR9-203ENST00000395963 ZNF493Q6ZR52 646 aa6.47□□□□□ -1.37
CCR9-203ENST00000395963 NUP35Q8NFH5 326 aa6.47□□□□□ -1.37
CCR9-203ENST00000395963 CYSLTR1Q9Y271 337 aa6.47□□□□□ -1.37
CCR9-203ENST00000395963 SPINK13Q1W4C9 94 aa6.46□□□□□ -1.37
CCR9-203ENST00000395963 URB1-AS1Q96HZ7 61 aa6.46□□□□□ -1.37
CCR9-203ENST00000395963 IGHV1OR15-1A0A075B7D0 117 aa6.46□□□□□ -1.38
CCR9-203ENST00000395963 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.46□□□□□ -1.38
CCR9-203ENST00000395963 CA1P00915 261 aaPredicted RBP6.46□□□□□ -1.38
CCR9-203ENST00000395963 IGHV4-30-4P0DP06 118 aa6.46□□□□□ -1.38
CCR9-203ENST00000395963 CRIP1P50238 77 aa6.46□□□□□ -1.38
CCR9-203ENST00000395963 GATD1Q8NB37 220 aa6.46□□□□□ -1.38
CCR9-203ENST00000395963 SGK494Q96LW2 274 aa6.46□□□□□ -1.38
CCR9-203ENST00000395963 SPANXB1Q9NS25 103 aaPredicted RBP6.46□□□□□ -1.38
CCR9-203ENST00000395963 RNASE4P34096 147 aaKnown RBP6.45□□□□□ -1.38
CCR9-203ENST00000395963 ZNF80P51504 273 aaPredicted RBP6.45□□□□□ -1.38
CCR9-203ENST00000395963 PGPEP1Q9NXJ5 209 aa6.45□□□□□ -1.38
CCR9-203ENST00000395963 SETD2Q9BYW2 2564 aaPredicted RBP6.45□□□□□ -1.38
CCR9-203ENST00000395963 TENM1Q9UKZ4 2725 aa6.45□□□□□ -1.38
CCR9-203ENST00000395963 TAL2Q16559 108 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms