RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 DNAJC30Q96LL9 226 aa10.28□□□□□ -0.76
CDC42SE2-202ENST00000395246 NACAE9PAV3 2078 aa10.28□□□□□ -0.76
CDC42SE2-202ENST00000395246 OR11H12B2RN74 326 aa10.27□□□□□ -0.76
CDC42SE2-202ENST00000395246 IGLC3P0DOY3 106 aa10.27□□□□□ -0.76
CDC42SE2-202ENST00000395246 CRYBA4P53673 196 aa10.27□□□□□ -0.76
CDC42SE2-202ENST00000395246 C14orf144Q96I85 54 aa10.27□□□□□ -0.76
CDC42SE2-202ENST00000395246 CD7P09564 240 aa10.27□□□□□ -0.77
CDC42SE2-202ENST00000395246 ZNF415Q09FC8 603 aa10.27□□□□□ -0.77
CDC42SE2-202ENST00000395246 WFDC3Q8IUB2 231 aa10.27□□□□□ -0.77
CDC42SE2-202ENST00000395246 SMKR1H3BMG3 65 aa10.27□□□□□ -0.77
CDC42SE2-202ENST00000395246 SCGB1D1O95968 90 aa10.27□□□□□ -0.77
CDC42SE2-202ENST00000395246 RHOHQ15669 191 aa10.27□□□□□ -0.77
CDC42SE2-202ENST00000395246 TPPP3Q9BW30 176 aa10.27□□□□□ -0.77
CDC42SE2-202ENST00000395246 A8MZ25 164 aa10.26□□□□□ -0.77
CDC42SE2-202ENST00000395246 LINC00694P0DN24 101 aa10.26□□□□□ -0.77
CDC42SE2-202ENST00000395246 MRPS16Q9Y3D3 137 aaKnown RBP10.26□□□□□ -0.77
CDC42SE2-202ENST00000395246 NCR2O95944 276 aa10.25□□□□□ -0.77
CDC42SE2-202ENST00000395246 RHODO00212 210 aa10.25□□□□□ -0.77
CDC42SE2-202ENST00000395246 ATP5LO75964 103 aa10.25□□□□□ -0.77
CDC42SE2-202ENST00000395246 GATA1P15976 413 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE2-202ENST00000395246 MUC21Q5SSG8 566 aa10.25□□□□□ -0.77
CDC42SE2-202ENST00000395246 TMEM263Q8WUH6 116 aaKnown RBP10.25□□□□□ -0.77
CDC42SE2-202ENST00000395246 TRAV12-2A0A075B6T6 113 aa10.24□□□□□ -0.77
CDC42SE2-202ENST00000395246 IGIPA6NJ69 53 aa10.24□□□□□ -0.77
CDC42SE2-202ENST00000395246 CD33P20138 364 aa10.24□□□□□ -0.77
CDC42SE2-202ENST00000395246 ODF1Q14990 250 aa10.24□□□□□ -0.77
CDC42SE2-202ENST00000395246 C9orf66Q5T8R8 295 aa10.24□□□□□ -0.77
CDC42SE2-202ENST00000395246 VAMP8Q9BV40 100 aa10.24□□□□□ -0.77
CDC42SE2-202ENST00000395246 SPG11Q96JI7 2443 aa10.24□□□□□ -0.77
CDC42SE2-202ENST00000395246 CREBBPQ92793 2442 aa10.24□□□□□ -0.77
CDC42SE2-202ENST00000395246 S100A4P26447 101 aaKnown RBP10.24□□□□□ -0.77
CDC42SE2-202ENST00000395246 CFAP126Q5VTH2 177 aa10.24□□□□□ -0.77
CDC42SE2-202ENST00000395246 FAM19A3Q7Z5A8 133 aa10.24□□□□□ -0.77
CDC42SE2-202ENST00000395246 C14orf178Q8N769 122 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE2-202ENST00000395246 TIMM17AQ99595 171 aa10.24□□□□□ -0.77
CDC42SE2-202ENST00000395246 HHLA3Q9XRX5 114 aa10.24□□□□□ -0.77
CDC42SE2-202ENST00000395246 KRTDAPP60985 99 aa10.24□□□□□ -0.77
CDC42SE2-202ENST00000395246 NEXN-AS1Q8NBZ9 246 aa10.24□□□□□ -0.77
CDC42SE2-202ENST00000395246 C2orf88Q9BSF0 95 aa10.24□□□□□ -0.77
CDC42SE2-202ENST00000395246 MCRIP2Q9BUT9 160 aaKnown RBP10.24□□□□□ -0.77
CDC42SE2-202ENST00000395246 IGHV3-53P01767 116 aa10.23□□□□□ -0.77
CDC42SE2-202ENST00000395246 TFPI2P48307 235 aa10.23□□□□□ -0.77
CDC42SE2-202ENST00000395246 IFI27L1Q96BM0 104 aa10.23□□□□□ -0.77
CDC42SE2-202ENST00000395246 PYGO1Q9Y3Y4 419 aa10.23□□□□□ -0.77
CDC42SE2-202ENST00000395246 C1QTNF4Q9BXJ3 329 aa10.23□□□□□ -0.77
CDC42SE2-202ENST00000395246 IGKV3-7A0A075B6H7 116 aa10.23□□□□□ -0.77
CDC42SE2-202ENST00000395246 FGF6P10767 208 aa10.23□□□□□ -0.77
CDC42SE2-202ENST00000395246 ZNF124Q15973 351 aa10.23□□□□□ -0.77
CDC42SE2-202ENST00000395246 MUC21A0A0G2JKD1 596 aa10.22□□□□□ -0.77
CDC42SE2-202ENST00000395246 MUC21A0A140T8X8 626 aa10.22□□□□□ -0.77
CDC42SE2-202ENST00000395246 VCYO14598 125 aa10.22□□□□□ -0.77
CDC42SE2-202ENST00000395246 KIR2DL5BQ8NHK3 375 aa10.22□□□□□ -0.77
CDC42SE2-202ENST00000395246 NSD1Q96L73 2696 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE2-202ENST00000395246 SIVA1O15304 175 aa10.22□□□□□ -0.77
CDC42SE2-202ENST00000395246 PMCHL2Q9BQD1 86 aa10.22□□□□□ -0.77
CDC42SE2-202ENST00000395246 IGLL1P15814 213 aa10.21□□□□□ -0.77
CDC42SE2-202ENST00000395246 NUTF2P61970 127 aaKnown RBP10.21□□□□□ -0.77
CDC42SE2-202ENST00000395246 TMEM141Q96I45 108 aa10.21□□□□□ -0.77
CDC42SE2-202ENST00000395246 TRAV26-2A0A0B4J265 109 aa10.21□□□□□ -0.77
CDC42SE2-202ENST00000395246 FAM104AQ969W3 186 aa10.21□□□□□ -0.77
CDC42SE2-202ENST00000395246 C16orf74Q96GX8 76 aa10.21□□□□□ -0.77
CDC42SE2-202ENST00000395246 SMIM9A6NGZ8 99 aa10.21□□□□□ -0.78
CDC42SE2-202ENST00000395246 STHQ8IWL8 128 aa10.21□□□□□ -0.78
CDC42SE2-202ENST00000395246 RPL39LQ96EH5 51 aaKnown RBP10.21□□□□□ -0.78
CDC42SE2-202ENST00000395246 UQCR10Q9UDW1 63 aa10.21□□□□□ -0.78
CDC42SE2-202ENST00000395246 CSPG4Q6UVK1 2322 aa10.21□□□□□ -0.78
CDC42SE2-202ENST00000395246 A0A087WX48 190 aa10.2□□□□□ -0.78
CDC42SE2-202ENST00000395246 TSHBP01222 138 aa10.2□□□□□ -0.78
CDC42SE2-202ENST00000395246 SMIM17P0DL12 118 aa10.2□□□□□ -0.78
CDC42SE2-202ENST00000395246 EGFEM1PQ0D2K5 195 aa10.2□□□□□ -0.78
CDC42SE2-202ENST00000395246 SPATA45Q537H7 98 aa10.2□□□□□ -0.78
CDC42SE2-202ENST00000395246 TMEM158Q8WZ71 300 aa10.2□□□□□ -0.78
CDC42SE2-202ENST00000395246 H7C1H1 209 aa10.2□□□□□ -0.78
CDC42SE2-202ENST00000395246 ERASQ7Z444 233 aa10.2□□□□□ -0.78
CDC42SE2-202ENST00000395246 PRR31Q5SQ13 230 aa10.19□□□□□ -0.78
CDC42SE2-202ENST00000395246 TRAV4A0A0B4J268 109 aa10.19□□□□□ -0.78
CDC42SE2-202ENST00000395246 TRBV10-1A0A0K0K1A3 114 aa10.19□□□□□ -0.78
CDC42SE2-202ENST00000395246 SAP30O75446 220 aa10.19□□□□□ -0.78
CDC42SE2-202ENST00000395246 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE2-202ENST00000395246 ZNF876PQ49A33 203 aa10.19□□□□□ -0.78
CDC42SE2-202ENST00000395246 CBY3A6NI87 242 aa10.18□□□□□ -0.78
CDC42SE2-202ENST00000395246 TIMM21Q9BVV7 248 aa10.18□□□□□ -0.78
CDC42SE2-202ENST00000395246 JPT2Q9H910 190 aa10.18□□□□□ -0.78
CDC42SE2-202ENST00000395246 COX8AP10176 69 aa10.18□□□□□ -0.78
CDC42SE2-202ENST00000395246 MAP1AP78559 2803 aaPredicted RBP10.17□□□□□ -0.78
CDC42SE2-202ENST00000395246 LOC389332A0A1B0GUA5 103 aa10.17□□□□□ -0.78
CDC42SE2-202ENST00000395246 P0DMU3 169 aa10.17□□□□□ -0.78
CDC42SE2-202ENST00000395246 FAM231AP0DMU4 169 aa10.17□□□□□ -0.78
CDC42SE2-202ENST00000395246 FAM231CP0DMU5 169 aa10.17□□□□□ -0.78
CDC42SE2-202ENST00000395246 LURAP1LQ8IV03 231 aa10.17□□□□□ -0.78
CDC42SE2-202ENST00000395246 BOD1L2Q8IYS8 172 aa10.17□□□□□ -0.78
CDC42SE2-202ENST00000395246 KHDC1LQ5JSQ8 128 aa10.17□□□□□ -0.78
CDC42SE2-202ENST00000395246 A0A1W2PRX2 142 aa10.16□□□□□ -0.78
CDC42SE2-202ENST00000395246 I3L3M4 83 aa10.16□□□□□ -0.78
CDC42SE2-202ENST00000395246 CSTL1Q9H114 145 aa10.16□□□□□ -0.78
CDC42SE2-202ENST00000395246 GTSF1LQ9H1H1 148 aa10.16□□□□□ -0.78
CDC42SE2-202ENST00000395246 PLNP26678 52 aa10.16□□□□□ -0.78
CDC42SE2-202ENST00000395246 NFE4Q86UQ8 179 aa10.16□□□□□ -0.78
CDC42SE2-202ENST00000395246 AMELXQ99217 191 aa10.16□□□□□ -0.78
CDC42SE2-202ENST00000395246 CSDC2Q9Y534 153 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms