RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 MAPKAPK5-AS1Q8N8E1 139 aa4.4□□□□□ -1.71
RFFL-202ENST00000394597 NAV2Q8IVL1 2488 aa4.4□□□□□ -1.71
RFFL-202ENST00000394597 FASNP49327 2511 aaKnown RBP4.4□□□□□ -1.71
RFFL-202ENST00000394597 TRBV19A0A075B6N1 114 aa4.4□□□□□ -1.71
RFFL-202ENST00000394597 VWC2LB2RUY7 222 aa4.4□□□□□ -1.71
RFFL-202ENST00000394597 TEX22C9J3V5 150 aa4.4□□□□□ -1.71
RFFL-202ENST00000394597 F5H768 121 aa4.4□□□□□ -1.71
RFFL-202ENST00000394597 LY6LH3BQJ8 138 aa4.4□□□□□ -1.71
RFFL-202ENST00000394597 I3L2K1 104 aa4.4□□□□□ -1.71
RFFL-202ENST00000394597 IGHV4-59P01825 116 aa4.4□□□□□ -1.71
RFFL-202ENST00000394597 PF4P02776 101 aa4.4□□□□□ -1.71
RFFL-202ENST00000394597 IGFL4Q6B9Z1 124 aa4.4□□□□□ -1.71
RFFL-202ENST00000394597 DNAJC30Q96LL9 226 aa4.4□□□□□ -1.71
RFFL-202ENST00000394597 CDIP1Q9H305 208 aa4.4□□□□□ -1.71
RFFL-202ENST00000394597 HIVEP2P31629 2446 aa4.4□□□□□ -1.71
RFFL-202ENST00000394597 REV3LO60673 3130 aa4.4□□□□□ -1.71
RFFL-202ENST00000394597 TNRC18O15417 2968 aaPredicted RBP4.39□□□□□ -1.71
RFFL-202ENST00000394597 TEX49A0A1B0GTD5 131 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 A4D1N5 150 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 H3BUA1 57 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 UQCRQO14949 82 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 RNASE1P07998 156 aaKnown RBP4.39□□□□□ -1.71
RFFL-202ENST00000394597 NDPQ00604 133 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 PDE6HQ13956 83 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 ZNF493Q6ZR52 646 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 COPS9Q8WXC6 57 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 PLEKHB2Q96CS7 222 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 MSRB1Q9NZV6 116 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 DNAH14Q0VDD8 3507 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 TRAV13-1A0A0B4J241 112 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 K7EIM0 57 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 OVOL1O14753 267 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 IGKV3-20P01619 116 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 ZNF415Q09FC8 603 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 NDUFA11Q86Y39 141 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 C5orf56Q8N8D9 126 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 ZNF491Q8N8L2 437 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 C11orf44Q8N8P7 122 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 TMEM14CQ9P0S9 112 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 LRRK2Q5S007 2527 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 IGLV11-55A0A075B6I3 123 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 SUMO2P61956 95 aaKnown RBP4.39□□□□□ -1.71
RFFL-202ENST00000394597 FOXE3Q13461 319 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 C14orf178Q8N769 122 aaPredicted RBP4.39□□□□□ -1.71
RFFL-202ENST00000394597 CFHR4Q92496 578 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 SMIM2Q9BVW6 85 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 WDFY3Q8IZQ1 3526 aa4.39□□□□□ -1.71
RFFL-202ENST00000394597 A0A1W2PPR1 153 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 H3BRN7 92 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 J3QQQ9 107 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 NDUFA7O95182 113 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 NFE4Q86UQ8 179 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 PRR25Q96S07 402 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 RHPN1-AS1Q9BWJ2 59 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 NDUFA4O00483 81 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 CRYGBP07316 175 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 SYNJ2BPP57105 145 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 BLCAPP62952 87 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 C9orf139Q6ZV77 190 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 DYNAPQ8N1N2 210 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 C17orf77Q96MU5 243 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 MLST8Q9BVC4 326 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 DAZ1Q9NQZ3 744 aaKnown RBP4.38□□□□□ -1.71
RFFL-202ENST00000394597 MYO15AQ9UKN7 3530 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 SPTBN5Q9NRC6 3674 aaKnown RBP4.38□□□□□ -1.71
RFFL-202ENST00000394597 COL27A1Q8IZC6 1860 aaPredicted RBP4.38□□□□□ -1.71
RFFL-202ENST00000394597 ATOX1O00244 68 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 DUSP14O95147 198 aaKnown RBP4.38□□□□□ -1.71
RFFL-202ENST00000394597 ACYP1P07311 99 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 ELANEP08246 267 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 EGR2P11161 476 aaPredicted RBP4.38□□□□□ -1.71
RFFL-202ENST00000394597 TP53TG1Q9Y2A0 90 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 CSDC2Q9Y534 153 aaKnown RBP4.38□□□□□ -1.71
RFFL-202ENST00000394597 TRBV10-2A0A0K0K1G8 114 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 A0A1B0GX51 115 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 INAFM2P0DMQ5 153 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 EBI3Q14213 229 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 Q6ZQT7 251 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 C3orf22Q8N5N4 141 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 DPH3P1Q9H4G8 78 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 PKIGQ9Y2B9 76 aa4.38□□□□□ -1.71
RFFL-202ENST00000394597 XIRP2A4UGR9 3374 aa4.37□□□□□ -1.71
RFFL-202ENST00000394597 IGKV3D-20A0A0C4DH25 116 aa4.37□□□□□ -1.71
RFFL-202ENST00000394597 IGKV1-17P01599 117 aa4.37□□□□□ -1.71
RFFL-202ENST00000394597 RNASE4P34096 147 aaKnown RBP4.37□□□□□ -1.71
RFFL-202ENST00000394597 PRRC2CQ9Y520 2896 aaKnown RBP4.37□□□□□ -1.71
RFFL-202ENST00000394597 GP9P14770 177 aa4.37□□□□□ -1.71
RFFL-202ENST00000394597 ERCC8Q13216 396 aa4.37□□□□□ -1.71
RFFL-202ENST00000394597 DPH3Q96FX2 82 aa4.37□□□□□ -1.71
RFFL-202ENST00000394597 USP9XQ93008 2570 aaPredicted RBP4.37□□□□□ -1.71
RFFL-202ENST00000394597 A6NDX4 124 aa4.37□□□□□ -1.71
RFFL-202ENST00000394597 FAM19A5Q7Z5A7 132 aaPredicted RBP4.37□□□□□ -1.71
RFFL-202ENST00000394597 LINC00477Q96M19 166 aa4.37□□□□□ -1.71
RFFL-202ENST00000394597 BBC3Q96PG8 261 aaPredicted RBP4.37□□□□□ -1.71
RFFL-202ENST00000394597 EYSQ5T1H1 3165 aa4.36□□□□□ -1.71
RFFL-202ENST00000394597 TRAV21A0A0B4J279 112 aa4.36□□□□□ -1.71
RFFL-202ENST00000394597 LOC107984640A0A0U1RRK4 108 aa4.36□□□□□ -1.71
RFFL-202ENST00000394597 IGHG2P01859 326 aa4.36□□□□□ -1.71
RFFL-202ENST00000394597 CTSGP08311 255 aa4.36□□□□□ -1.71
RFFL-202ENST00000394597 IGLC6P0CF74 106 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms