RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 IGHV3-23P01764 117 aa9.46□□□□□ -0.9
SLC28A1-203ENST00000394573 IGHV1-2P23083 117 aa9.46□□□□□ -0.9
SLC28A1-203ENST00000394573 FHL2Q14192 279 aa9.46□□□□□ -0.9
SLC28A1-203ENST00000394573 MSMPQ1L6U9 139 aa9.46□□□□□ -0.9
SLC28A1-203ENST00000394573 CACNA1BQ00975 2339 aa9.46□□□□□ -0.9
SLC28A1-203ENST00000394573 SYNJ2BPP57105 145 aa9.46□□□□□ -0.9
SLC28A1-203ENST00000394573 RPL18AQ02543 176 aaKnown RBP9.46□□□□□ -0.9
SLC28A1-203ENST00000394573 POLEQ07864 2286 aa9.45□□□□□ -0.9
SLC28A1-203ENST00000394573 IGHV5-10-1A0A0J9YXX1 117 aa9.45□□□□□ -0.9
SLC28A1-203ENST00000394573 ACYP1P07311 99 aa9.45□□□□□ -0.9
SLC28A1-203ENST00000394573 MNX1P50219 401 aaPredicted RBP9.45□□□□□ -0.9
SLC28A1-203ENST00000394573 TIMM21Q9BVV7 248 aa9.45□□□□□ -0.9
SLC28A1-203ENST00000394573 I3L2K1 104 aa9.45□□□□□ -0.9
SLC28A1-203ENST00000394573 AVPP01185 164 aa9.45□□□□□ -0.9
SLC28A1-203ENST00000394573 NDPQ00604 133 aa9.45□□□□□ -0.9
SLC28A1-203ENST00000394573 DAZ2Q13117 558 aaKnown RBP9.45□□□□□ -0.9
SLC28A1-203ENST00000394573 DAZ4Q86SG3 579 aaKnown RBP9.45□□□□□ -0.9
SLC28A1-203ENST00000394573 DAZ1Q9NQZ3 744 aaKnown RBP9.45□□□□□ -0.9
SLC28A1-203ENST00000394573 DAZ3Q9NR90 486 aaKnown RBP9.45□□□□□ -0.9
SLC28A1-203ENST00000394573 SERP2Q8N6R1 65 aa9.44□□□□□ -0.9
SLC28A1-203ENST00000394573 DCANP1Q8TF63 244 aa9.44□□□□□ -0.9
SLC28A1-203ENST00000394573 C10orf142B7Z368 130 aa9.44□□□□□ -0.9
SLC28A1-203ENST00000394573 M0R1W7 72 aa9.44□□□□□ -0.9
SLC28A1-203ENST00000394573 CCL5P13501 91 aa9.44□□□□□ -0.9
SLC28A1-203ENST00000394573 HIST1H4AP62805 103 aaKnown RBP9.44□□□□□ -0.9
SLC28A1-203ENST00000394573 ADAMTSL4-AS1Q5T5F5 129 aa9.44□□□□□ -0.9
SLC28A1-203ENST00000394573 DAND5Q8N907 189 aa9.44□□□□□ -0.9
SLC28A1-203ENST00000394573 BOD1L1Q8NFC6 3051 aa9.43□□□□□ -0.9
SLC28A1-203ENST00000394573 RNF223E7ERA6 249 aa9.43□□□□□ -0.9
SLC28A1-203ENST00000394573 LINC01561Q8N1V8 128 aa9.43□□□□□ -0.9
SLC28A1-203ENST00000394573 PTPRQQ9UMZ3 2332 aa9.43□□□□□ -0.9
SLC28A1-203ENST00000394573 IGHV1OR15-9A0A0B4J2B8 117 aa9.43□□□□□ -0.9
SLC28A1-203ENST00000394573 IGHV3-66A0A0C4DH42 116 aa9.43□□□□□ -0.9
SLC28A1-203ENST00000394573 A0A0J9YXY3 114 aa9.43□□□□□ -0.9
SLC28A1-203ENST00000394573 K7ENP7 123 aa9.43□□□□□ -0.9
SLC28A1-203ENST00000394573 IGHV3OR16-13A0A075B7E8 117 aa9.42□□□□□ -0.9
SLC28A1-203ENST00000394573 IGHV3-74A0A0B4J1X5 117 aa9.42□□□□□ -0.9
SLC28A1-203ENST00000394573 IGFBP4P22692 258 aa9.42□□□□□ -0.9
SLC28A1-203ENST00000394573 TIRAPP58753 221 aa9.42□□□□□ -0.9
SLC28A1-203ENST00000394573 CCL8P80075 99 aa9.42□□□□□ -0.9
SLC28A1-203ENST00000394573 CDSNQ15517 529 aa9.42□□□□□ -0.9
SLC28A1-203ENST00000394573 SPANXCQ9NY87 97 aa9.42□□□□□ -0.9
SLC28A1-203ENST00000394573 NXPH4O95158 308 aa9.42□□□□□ -0.9
SLC28A1-203ENST00000394573 CXCL5P42830 114 aa9.42□□□□□ -0.9
SLC28A1-203ENST00000394573 COX8CQ7Z4L0 72 aa9.42□□□□□ -0.9
SLC28A1-203ENST00000394573 BRK1Q8WUW1 75 aa9.42□□□□□ -0.9
SLC28A1-203ENST00000394573 C9orf85Q96MD7 179 aa9.42□□□□□ -0.9
SLC28A1-203ENST00000394573 GAFA1Q96PS6 74 aa9.42□□□□□ -0.9
SLC28A1-203ENST00000394573 RNF7Q9UBF6 113 aa9.42□□□□□ -0.9
SLC28A1-203ENST00000394573 RAI1Q7Z5J4 1906 aaPredicted RBP9.42□□□□□ -0.9
SLC28A1-203ENST00000394573 LY6LH3BQJ8 138 aa9.41□□□□□ -0.9
SLC28A1-203ENST00000394573 K7EIM0 57 aa9.41□□□□□ -0.9
SLC28A1-203ENST00000394573 CCL4P13236 92 aa9.41□□□□□ -0.9
SLC28A1-203ENST00000394573 PDE6HQ13956 83 aa9.41□□□□□ -0.9
SLC28A1-203ENST00000394573 DEFB127Q9H1M4 99 aa9.41□□□□□ -0.9
SLC28A1-203ENST00000394573 TEX22C9J3V5 150 aa9.41□□□□□ -0.9
SLC28A1-203ENST00000394573 PAPPA-AS1Q5QFB9 102 aa9.41□□□□□ -0.9
SLC28A1-203ENST00000394573 SMAD5-AS1Q9Y6J3 95 aa9.41□□□□□ -0.9
SLC28A1-203ENST00000394573 SVEP1Q4LDE5 3571 aa9.41□□□□□ -0.9
SLC28A1-203ENST00000394573 PKDREJQ9NTG1 2253 aa9.41□□□□□ -0.9
SLC28A1-203ENST00000394573 IGIPA6NJ69 53 aa9.41□□□□□ -0.9
SLC28A1-203ENST00000394573 A8MZ25 164 aa9.41□□□□□ -0.9
SLC28A1-203ENST00000394573 C1orf195Q5TG92 126 aa9.41□□□□□ -0.9
SLC28A1-203ENST00000394573 C9orf139Q6ZV77 190 aa9.41□□□□□ -0.9
SLC28A1-203ENST00000394573 IL17DQ8TAD2 202 aa9.41□□□□□ -0.9
SLC28A1-203ENST00000394573 C16orf92Q96LL3 132 aa9.41□□□□□ -0.9
SLC28A1-203ENST00000394573 SLC50A1Q9BRV3 221 aa9.41□□□□□ -0.9
SLC28A1-203ENST00000394573 FAM223BA6NKX1 122 aa9.4□□□□□ -0.9
SLC28A1-203ENST00000394573 CNEP1R1Q8N9A8 125 aa9.4□□□□□ -0.9
SLC28A1-203ENST00000394573 TTTY12Q9BZ98 90 aa9.4□□□□□ -0.9
SLC28A1-203ENST00000394573 USP17L23D6RBM5 183 aa9.4□□□□□ -0.91
SLC28A1-203ENST00000394573 IGLV3-19P01714 112 aa9.4□□□□□ -0.91
SLC28A1-203ENST00000394573 LEPROTO15243 131 aa9.39□□□□□ -0.91
SLC28A1-203ENST00000394573 FOLR3P41439 243 aa9.39□□□□□ -0.91
SLC28A1-203ENST00000394573 PVRIGQ6DKI7 326 aa9.39□□□□□ -0.91
SLC28A1-203ENST00000394573 MDS2Q8NDY4 140 aa9.39□□□□□ -0.91
SLC28A1-203ENST00000394573 PRORYQ9H606 182 aa9.39□□□□□ -0.91
SLC28A1-203ENST00000394573 GFRALQ6UXV0 394 aa9.38□□□□□ -0.91
SLC28A1-203ENST00000394573 TMEM243Q9BU79 118 aa9.38□□□□□ -0.91
SLC28A1-203ENST00000394573 ABCA4P78363 2273 aa9.38□□□□□ -0.91
SLC28A1-203ENST00000394573 A0A0J9YXV3 536 aa9.38□□□□□ -0.91
SLC28A1-203ENST00000394573 IGF1P05019 195 aa9.38□□□□□ -0.91
SLC28A1-203ENST00000394573 ZNF876PQ49A33 203 aa9.38□□□□□ -0.91
SLC28A1-203ENST00000394573 PCNX1Q96RV3 2341 aa9.38□□□□□ -0.91
SLC28A1-203ENST00000394573 LITAFQ99732 161 aa9.37□□□□□ -0.91
SLC28A1-203ENST00000394573 SPANXDQ9BXN6 97 aa9.37□□□□□ -0.91
SLC28A1-203ENST00000394573 IGHV3-49A0A0A0MS15 119 aa9.37□□□□□ -0.91
SLC28A1-203ENST00000394573 BAALC-AS2P0C853 105 aa9.37□□□□□ -0.91
SLC28A1-203ENST00000394573 IGHV3OR16-10A0A075B7F0 116 aa9.36□□□□□ -0.91
SLC28A1-203ENST00000394573 A0A0U1RRA0 63 aa9.36□□□□□ -0.91
SLC28A1-203ENST00000394573 LHBP01229 141 aa9.36□□□□□ -0.91
SLC28A1-203ENST00000394573 S100A4P26447 101 aaKnown RBP9.36□□□□□ -0.91
SLC28A1-203ENST00000394573 HILS1P60008 231 aa9.36□□□□□ -0.91
SLC28A1-203ENST00000394573 C20orf197Q8N268 126 aa9.36□□□□□ -0.91
SLC28A1-203ENST00000394573 WFDC9Q8NEX5 89 aa9.36□□□□□ -0.91
SLC28A1-203ENST00000394573 Q9HAA7 133 aa9.36□□□□□ -0.91
SLC28A1-203ENST00000394573 ATMQ13315 3056 aa9.36□□□□□ -0.91
SLC28A1-203ENST00000394573 PRR9Q5T870 116 aa9.35□□□□□ -0.91
SLC28A1-203ENST00000394573 SAP25Q8TEE9 199 aa9.35□□□□□ -0.91
SLC28A1-203ENST00000394573 LAMA5O15230 3695 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms