RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TOMM6Q96B49 74 aa10.06□□□□□ -0.8
GTF2F1-201ENST00000394456 ACANP16112 2415 aa10.06□□□□□ -0.8
GTF2F1-201ENST00000394456 NF1P21359 2839 aa10.06□□□□□ -0.8
GTF2F1-201ENST00000394456 BRI3O95415 125 aa10.06□□□□□ -0.8
GTF2F1-201ENST00000394456 DCANP1Q8TF63 244 aa10.06□□□□□ -0.8
GTF2F1-201ENST00000394456 HIGD1BQ9P298 99 aa10.06□□□□□ -0.8
GTF2F1-201ENST00000394456 KIF25-AS1Q9Y6Z4 181 aa10.06□□□□□ -0.8
GTF2F1-201ENST00000394456 PRSS29PA6NIE9 313 aa10.06□□□□□ -0.8
GTF2F1-201ENST00000394456 F8VRH5 84 aa10.06□□□□□ -0.8
GTF2F1-201ENST00000394456 HOXA3O43365 443 aaPredicted RBP10.06□□□□□ -0.8
GTF2F1-201ENST00000394456 GTF2H5Q6ZYL4 71 aa10.06□□□□□ -0.8
GTF2F1-201ENST00000394456 H7C1H1 209 aa10.05□□□□□ -0.8
GTF2F1-201ENST00000394456 TSHBP01222 138 aa10.05□□□□□ -0.8
GTF2F1-201ENST00000394456 PSMB8P28062 276 aa10.05□□□□□ -0.8
GTF2F1-201ENST00000394456 PSMG4Q5JS54 123 aa10.05□□□□□ -0.8
GTF2F1-201ENST00000394456 FAM74A4Q5TZK3 123 aa10.05□□□□□ -0.8
GTF2F1-201ENST00000394456 KLHL30-AS1Q8NEE0 82 aa10.05□□□□□ -0.8
GTF2F1-201ENST00000394456 MDFICQ9P1T7 246 aa10.05□□□□□ -0.8
GTF2F1-201ENST00000394456 VPREB3Q9UKI3 123 aa10.05□□□□□ -0.8
GTF2F1-201ENST00000394456 KMT2BQ9UMN6 2715 aaPredicted RBP10.05□□□□□ -0.8
GTF2F1-201ENST00000394456 FSHBP01225 129 aa10.05□□□□□ -0.8
GTF2F1-201ENST00000394456 CD7P09564 240 aa10.05□□□□□ -0.8
GTF2F1-201ENST00000394456 KRTAP1-3Q8IUG1 177 aa10.05□□□□□ -0.8
GTF2F1-201ENST00000394456 PRM2P04554 102 aa10.04□□□□□ -0.8
GTF2F1-201ENST00000394456 CRYGDP07320 174 aa10.04□□□□□ -0.8
GTF2F1-201ENST00000394456 SUMO4Q6EEV6 95 aa10.04□□□□□ -0.8
GTF2F1-201ENST00000394456 PLEKHB2Q96CS7 222 aa10.04□□□□□ -0.8
GTF2F1-201ENST00000394456 KLLNB2CW77 178 aa10.04□□□□□ -0.8
GTF2F1-201ENST00000394456 FABP2P12104 132 aa10.04□□□□□ -0.8
GTF2F1-201ENST00000394456 AMTNQ6UX39 209 aa10.04□□□□□ -0.8
GTF2F1-201ENST00000394456 APRG1Q8IVJ8 170 aa10.04□□□□□ -0.8
GTF2F1-201ENST00000394456 HIST1H4GQ99525 98 aa10.04□□□□□ -0.8
GTF2F1-201ENST00000394456 CYSLTR1Q9Y271 337 aa10.04□□□□□ -0.8
GTF2F1-201ENST00000394456 F5H697 171 aa10.03□□□□□ -0.8
GTF2F1-201ENST00000394456 HLA-DRB4P13762 266 aa10.03□□□□□ -0.8
GTF2F1-201ENST00000394456 ORMDL2Q53FV1 153 aa10.03□□□□□ -0.8
GTF2F1-201ENST00000394456 Q6YL49 198 aa10.03□□□□□ -0.8
GTF2F1-201ENST00000394456 TM2D2Q9BX73 214 aa10.03□□□□□ -0.8
GTF2F1-201ENST00000394456 HLA-DRB4X5D2U9 266 aa10.03□□□□□ -0.8
GTF2F1-201ENST00000394456 GCN1Q92616 2671 aaKnown RBP10.03□□□□□ -0.8
GTF2F1-201ENST00000394456 PLNP26678 52 aa10.03□□□□□ -0.8
GTF2F1-201ENST00000394456 CD300EQ496F6 205 aaPredicted RBP10.03□□□□□ -0.8
GTF2F1-201ENST00000394456 LRRC75A-AS1Q8N1F1 130 aa10.03□□□□□ -0.8
GTF2F1-201ENST00000394456 OPRPNQ99935 248 aaPredicted RBP10.03□□□□□ -0.8
GTF2F1-201ENST00000394456 C20orf78Q9BR46 151 aa10.03□□□□□ -0.8
GTF2F1-201ENST00000394456 FAM159AQ6UWV7 190 aa10.02□□□□□ -0.81
GTF2F1-201ENST00000394456 PRADC1Q9BSG0 188 aa10.02□□□□□ -0.81
GTF2F1-201ENST00000394456 SETD2Q9BYW2 2564 aaPredicted RBP10.02□□□□□ -0.81
GTF2F1-201ENST00000394456 TP53TG1Q9Y2A0 90 aa10.02□□□□□ -0.81
GTF2F1-201ENST00000394456 LGALS1P09382 135 aaKnown RBP10.02□□□□□ -0.81
GTF2F1-201ENST00000394456 SYNJ2BPP57105 145 aa10.02□□□□□ -0.81
GTF2F1-201ENST00000394456 SPINK13Q1W4C9 94 aa10.02□□□□□ -0.81
GTF2F1-201ENST00000394456 C12orf74Q32Q52 190 aa10.02□□□□□ -0.81
GTF2F1-201ENST00000394456 SFTA2Q6UW10 78 aa10.02□□□□□ -0.81
GTF2F1-201ENST00000394456 WFDC11Q8NEX6 87 aa10.02□□□□□ -0.81
GTF2F1-201ENST00000394456 TRBV7-3A0A075B6L6 115 aa10.01□□□□□ -0.81
GTF2F1-201ENST00000394456 TRAV12-1A0A0B4J245 112 aa10.01□□□□□ -0.81
GTF2F1-201ENST00000394456 IGLL5B9A064 214 aa10.01□□□□□ -0.81
GTF2F1-201ENST00000394456 C18orf65Q6ZTR6 163 aa10.01□□□□□ -0.81
GTF2F1-201ENST00000394456 PDZD2O15018 2839 aa10.01□□□□□ -0.81
GTF2F1-201ENST00000394456 C11orf86A6NJI1 115 aa10.01□□□□□ -0.81
GTF2F1-201ENST00000394456 OR11H12B2RN74 326 aa10.01□□□□□ -0.81
GTF2F1-201ENST00000394456 OR11H1Q8NG94 326 aa10.01□□□□□ -0.81
GTF2F1-201ENST00000394456 OR11H2Q8NH07 326 aa10.01□□□□□ -0.81
GTF2F1-201ENST00000394456 ZNF702PQ9H963 129 aa10.01□□□□□ -0.81
GTF2F1-201ENST00000394456 ZNF256Q9Y2P7 627 aaPredicted RBP10.01□□□□□ -0.81
GTF2F1-201ENST00000394456 MYMXA0A1B0GTQ4 84 aa10□□□□□ -0.81
GTF2F1-201ENST00000394456 HECTD1Q9ULT8 2610 aa10□□□□□ -0.81
GTF2F1-201ENST00000394456 MTORP42345 2549 aa10□□□□□ -0.81
GTF2F1-201ENST00000394456 MORN3Q6PF18 240 aaPredicted RBP10□□□□□ -0.81
GTF2F1-201ENST00000394456 ZFP2Q6ZN57 461 aa10□□□□□ -0.81
GTF2F1-201ENST00000394456 ZNF580Q9UK33 172 aa10□□□□□ -0.81
GTF2F1-201ENST00000394456 NOTCH2Q04721 2471 aa10□□□□□ -0.81
GTF2F1-201ENST00000394456 IGLV4-69A0A075B6H9 119 aa9.99□□□□□ -0.81
GTF2F1-201ENST00000394456 K7ERU9 68 aa9.99□□□□□ -0.81
GTF2F1-201ENST00000394456 NXPH4O95158 308 aa9.99□□□□□ -0.81
GTF2F1-201ENST00000394456 DEFB136Q30KP8 78 aa9.99□□□□□ -0.81
GTF2F1-201ENST00000394456 Q8N1Y9 231 aa9.99□□□□□ -0.81
GTF2F1-201ENST00000394456 H3BMG7 143 aa9.99□□□□□ -0.81
GTF2F1-201ENST00000394456 HTN1P15515 57 aa9.99□□□□□ -0.81
GTF2F1-201ENST00000394456 RPL24P83731 157 aaKnown RBP9.99□□□□□ -0.81
GTF2F1-201ENST00000394456 WFDC2Q14508 124 aa9.99□□□□□ -0.81
GTF2F1-201ENST00000394456 TEX48A0A1B0GUV7 120 aa9.98□□□□□ -0.81
GTF2F1-201ENST00000394456 POLR2KP53803 58 aaKnown RBP9.98□□□□□ -0.81
GTF2F1-201ENST00000394456 TSPEAR-AS2P59090 65 aa9.98□□□□□ -0.81
GTF2F1-201ENST00000394456 FASNP49327 2511 aaKnown RBP9.98□□□□□ -0.81
GTF2F1-201ENST00000394456 IGHV4OR15-8A0A075B7B6 117 aa9.98□□□□□ -0.81
GTF2F1-201ENST00000394456 A0A087WW49 117 aa9.98□□□□□ -0.81
GTF2F1-201ENST00000394456 IGHV3-16A0A0C4DH30 117 aa9.98□□□□□ -0.81
GTF2F1-201ENST00000394456 SDHAF1A6NFY7 115 aa9.98□□□□□ -0.81
GTF2F1-201ENST00000394456 ZNF815PA8K554 130 aa9.98□□□□□ -0.81
GTF2F1-201ENST00000394456 E9PLD3 99 aa9.98□□□□□ -0.81
GTF2F1-201ENST00000394456 DUX3Q96PT4 197 aa9.98□□□□□ -0.81
GTF2F1-201ENST00000394456 UNC79Q9P2D8 2635 aa9.98□□□□□ -0.81
GTF2F1-201ENST00000394456 IGHV3-73A0A0B4J1V6 119 aa9.98□□□□□ -0.81
GTF2F1-201ENST00000394456 IGIPA6NJ69 53 aa9.98□□□□□ -0.81
GTF2F1-201ENST00000394456 G3V4G9 280 aa9.98□□□□□ -0.81
GTF2F1-201ENST00000394456 MED14OSP0DP75 135 aa9.98□□□□□ -0.81
GTF2F1-201ENST00000394456 ZNF479Q96JC4 524 aa9.98□□□□□ -0.81
GTF2F1-201ENST00000394456 A0A0J9YX75 114 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms