RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 ZNF492Q9P255 531 aa7□□□□□ -1.29
CDH11-202ENST00000394156 C9JAW5 83 aa6.99□□□□□ -1.29
CDH11-202ENST00000394156 LMO4P61968 165 aa6.99□□□□□ -1.29
CDH11-202ENST00000394156 CCDC140Q96MF4 163 aa6.99□□□□□ -1.29
CDH11-202ENST00000394156 GFRA4Q9GZZ7 299 aa6.99□□□□□ -1.29
CDH11-202ENST00000394156 KLF12Q9Y4X4 402 aa6.99□□□□□ -1.29
CDH11-202ENST00000394156 COPS9Q8WXC6 57 aa6.99□□□□□ -1.29
CDH11-202ENST00000394156 ZNF503Q96F45 646 aa6.99□□□□□ -1.29
CDH11-202ENST00000394156 FANCD2OSQ96PS1 177 aa6.99□□□□□ -1.29
CDH11-202ENST00000394156 FAM231BA6NCW3 169 aa6.99□□□□□ -1.29
CDH11-202ENST00000394156 ZNF561-AS1K7EIQ3 104 aa6.99□□□□□ -1.29
CDH11-202ENST00000394156 HSD52Q0P140 79 aa6.99□□□□□ -1.29
CDH11-202ENST00000394156 TMEM243Q9BU79 118 aa6.99□□□□□ -1.29
CDH11-202ENST00000394156 FRYLO94915 3013 aa6.99□□□□□ -1.29
CDH11-202ENST00000394156 ZNF80P51504 273 aaPredicted RBP6.99□□□□□ -1.29
CDH11-202ENST00000394156 LY96Q9Y6Y9 160 aa6.99□□□□□ -1.29
CDH11-202ENST00000394156 PCSK5Q92824 1860 aa6.99□□□□□ -1.29
CDH11-202ENST00000394156 TRAV8-4A0A0B4J246 113 aa6.99□□□□□ -1.29
CDH11-202ENST00000394156 NPSP0C0P6 89 aa6.99□□□□□ -1.29
CDH11-202ENST00000394156 PROK1P58294 105 aa6.99□□□□□ -1.29
CDH11-202ENST00000394156 IGKV1D-37A0A075B6S9 117 aa6.98□□□□□ -1.29
CDH11-202ENST00000394156 APOC4P55056 127 aa6.98□□□□□ -1.29
CDH11-202ENST00000394156 MRPS16Q9Y3D3 137 aaKnown RBP6.98□□□□□ -1.29
CDH11-202ENST00000394156 SONP18583 2426 aaKnown RBP6.98□□□□□ -1.29
CDH11-202ENST00000394156 CGB7P0DN87 165 aa6.98□□□□□ -1.29
CDH11-202ENST00000394156 CHD9Q3L8U1 2897 aa6.98□□□□□ -1.29
CDH11-202ENST00000394156 C16orf54Q6UWD8 224 aa6.98□□□□□ -1.29
CDH11-202ENST00000394156 ZNF295-AS1Q8N0V1 137 aa6.98□□□□□ -1.29
CDH11-202ENST00000394156 AMTNQ6UX39 209 aa6.98□□□□□ -1.29
CDH11-202ENST00000394156 TMEM86BQ8N661 226 aa6.98□□□□□ -1.29
CDH11-202ENST00000394156 RASL10AQ92737 203 aa6.98□□□□□ -1.29
CDH11-202ENST00000394156 GTSF1LQ9H1H1 148 aa6.98□□□□□ -1.29
CDH11-202ENST00000394156 SPAG8Q99932 426 aaPredicted RBP6.97□□□□□ -1.29
CDH11-202ENST00000394156 H3BMM0 161 aa6.97□□□□□ -1.29
CDH11-202ENST00000394156 LEPROTO15243 131 aa6.97□□□□□ -1.29
CDH11-202ENST00000394156 ELANEP08246 267 aa6.97□□□□□ -1.29
CDH11-202ENST00000394156 GAGE2EQ4V326 116 aa6.97□□□□□ -1.29
CDH11-202ENST00000394156 UBE2WQ96B02 151 aa6.97□□□□□ -1.29
CDH11-202ENST00000394156 GAGE2DQ9UEU5 116 aa6.97□□□□□ -1.29
CDH11-202ENST00000394156 OCIAD2Q56VL3 154 aa6.97□□□□□ -1.29
CDH11-202ENST00000394156 LY6G5BQ8NDX9 201 aa6.97□□□□□ -1.29
CDH11-202ENST00000394156 TRAV12-1A0A0B4J245 112 aa6.97□□□□□ -1.29
CDH11-202ENST00000394156 RPL18AQ02543 176 aaKnown RBP6.97□□□□□ -1.29
CDH11-202ENST00000394156 MYMXA0A1B0GTQ4 84 aa6.97□□□□□ -1.29
CDH11-202ENST00000394156 LINC01549A6NIU2 74 aa6.97□□□□□ -1.29
CDH11-202ENST00000394156 TMEM238C9JI98 176 aa6.97□□□□□ -1.29
CDH11-202ENST00000394156 POU2AF1Q16633 256 aa6.97□□□□□ -1.29
CDH11-202ENST00000394156 FOXI2Q6ZQN5 318 aa6.97□□□□□ -1.29
CDH11-202ENST00000394156 Q6ZSR3 168 aa6.97□□□□□ -1.29
CDH11-202ENST00000394156 ZNF48Q96MX3 618 aaPredicted RBP6.97□□□□□ -1.29
CDH11-202ENST00000394156 WI2-2373I1.2A0A1W2PRP0 233 aa6.97□□□□□ -1.29
CDH11-202ENST00000394156 LOXL1Q08397 574 aaPredicted RBP6.97□□□□□ -1.29
CDH11-202ENST00000394156 MORN3Q6PF18 240 aaPredicted RBP6.97□□□□□ -1.29
CDH11-202ENST00000394156 TRAV25A0A0B4J276 109 aa6.96□□□□□ -1.29
CDH11-202ENST00000394156 C2orf82Q6UX34 121 aa6.96□□□□□ -1.29
CDH11-202ENST00000394156 FAM231DQ6ZW35 169 aa6.96□□□□□ -1.29
CDH11-202ENST00000394156 TMEM61Q8N0U2 210 aa6.96□□□□□ -1.29
CDH11-202ENST00000394156 NCOR1P1Q9H4R4 102 aa6.96□□□□□ -1.3
CDH11-202ENST00000394156 NOTCH2Q04721 2471 aa6.96□□□□□ -1.3
CDH11-202ENST00000394156 NCOR2Q9Y618 2525 aa6.96□□□□□ -1.3
CDH11-202ENST00000394156 Q0VG73 95 aa6.96□□□□□ -1.3
CDH11-202ENST00000394156 GAGE2AQ6NT46 116 aa6.96□□□□□ -1.3
CDH11-202ENST00000394156 F8W735 103 aaPredicted RBP6.96□□□□□ -1.3
CDH11-202ENST00000394156 A8MWV9 139 aa6.95□□□□□ -1.3
CDH11-202ENST00000394156 LY6G6DO95868 133 aa6.95□□□□□ -1.3
CDH11-202ENST00000394156 SMIM2Q9BVW6 85 aa6.95□□□□□ -1.3
CDH11-202ENST00000394156 ZMAT4Q9H898 229 aa6.95□□□□□ -1.3
CDH11-202ENST00000394156 TINCRA0A1B0GVN0 87 aa6.95□□□□□ -1.3
CDH11-202ENST00000394156 ANKHD1Q8IWZ3 2542 aaKnown RBP6.95□□□□□ -1.3
CDH11-202ENST00000394156 RBAKDNA6NC62 111 aa6.95□□□□□ -1.3
CDH11-202ENST00000394156 DMDP11532 3685 aa6.95□□□□□ -1.3
CDH11-202ENST00000394156 TMEM141Q96I45 108 aa6.95□□□□□ -1.3
CDH11-202ENST00000394156 TMEM190Q8WZ59 177 aa6.94□□□□□ -1.3
CDH11-202ENST00000394156 A6NDX4 124 aa6.94□□□□□ -1.3
CDH11-202ENST00000394156 AVPP01185 164 aa6.94□□□□□ -1.3
CDH11-202ENST00000394156 PLEKHB2Q96CS7 222 aa6.94□□□□□ -1.3
CDH11-202ENST00000394156 HIVEP2P31629 2446 aa6.94□□□□□ -1.3
CDH11-202ENST00000394156 IGLL5B9A064 214 aa6.94□□□□□ -1.3
CDH11-202ENST00000394156 CMC4P56277 68 aaPredicted RBP6.94□□□□□ -1.3
CDH11-202ENST00000394156 DAZAP2Q15038 168 aaPredicted RBP6.94□□□□□ -1.3
CDH11-202ENST00000394156 H3BMG7 143 aa6.94□□□□□ -1.3
CDH11-202ENST00000394156 NCR3O14931 201 aa6.93□□□□□ -1.3
CDH11-202ENST00000394156 NDUFA12Q9UI09 145 aa6.93□□□□□ -1.3
CDH11-202ENST00000394156 SMAD5-AS1Q9Y6J3 95 aa6.93□□□□□ -1.3
CDH11-202ENST00000394156 ABCA2Q9BZC7 2435 aa6.93□□□□□ -1.3
CDH11-202ENST00000394156 FGF6P10767 208 aa6.93□□□□□ -1.3
CDH11-202ENST00000394156 C9orf66Q5T8R8 295 aa6.93□□□□□ -1.3
CDH11-202ENST00000394156 COL27A1Q8IZC6 1860 aaPredicted RBP6.93□□□□□ -1.3
CDH11-202ENST00000394156 A0A1W2PPR1 153 aa6.92□□□□□ -1.3
CDH11-202ENST00000394156 IGLC2P0DOY2 106 aa6.92□□□□□ -1.3
CDH11-202ENST00000394156 IGLC3P0DOY3 106 aa6.92□□□□□ -1.3
CDH11-202ENST00000394156 C11orf71Q6IPW1 123 aa6.92□□□□□ -1.3
CDH11-202ENST00000394156 C8orf31Q8N9H6 132 aa6.92□□□□□ -1.3
CDH11-202ENST00000394156 C4orf3Q8WVX3 66 aa6.92□□□□□ -1.3
CDH11-202ENST00000394156 HHLA3Q9XRX5 114 aa6.92□□□□□ -1.3
CDH11-202ENST00000394156 Q9H8V8 135 aa6.92□□□□□ -1.3
CDH11-202ENST00000394156 SPTBN4Q9H254 2564 aa6.92□□□□□ -1.3
CDH11-202ENST00000394156 AGRNO00468 2067 aa6.92□□□□□ -1.3
CDH11-202ENST00000394156 CEND1Q8N111 149 aa6.92□□□□□ -1.3
CDH11-202ENST00000394156 SCRT2Q9NQ03 307 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms