RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 NDFIP1Q9BT67 221 aa4.39□□□□□ -1.71
CASC3-202ENST00000394114 TRAPPC1Q9Y5R8 145 aa4.39□□□□□ -1.71
CASC3-202ENST00000394114 MUC21A0A0G2JKD1 596 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 MUC21A0A140T8X8 626 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 SNURFLB1AK76 121 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 K7EMT4 169 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 KIAA1644Q3SXP7 199 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 MUC21Q5SSG8 566 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 Q6ZQT7 251 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 PGLYRP4Q96LB8 373 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 A0A087WZ39 114 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 C2orf70A6NJV1 201 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 LINC01619G3V211 115 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 SOCS3O14543 225 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 SH2D1AO60880 128 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 ZNF688P0C7X2 276 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 ACTL10Q5JWF8 245 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 TMEM78Q5T7P6 136 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 TSKUQ8WUA8 353 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 C4orf3Q8WVX3 66 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 HIST1H2BLQ99880 126 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 MS4A6AQ9H2W1 248 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 ZNF492Q9P255 531 aa4.38□□□□□ -1.71
CASC3-202ENST00000394114 GRIFINA4D1Z8 144 aa4.37□□□□□ -1.71
CASC3-202ENST00000394114 IGKV3-20P01619 116 aa4.37□□□□□ -1.71
CASC3-202ENST00000394114 RIGQ13278 110 aa4.37□□□□□ -1.71
CASC3-202ENST00000394114 ADAMTSL5Q6ZMM2 481 aa4.37□□□□□ -1.71
CASC3-202ENST00000394114 NAT8BQ9UHF3 227 aa4.37□□□□□ -1.71
CASC3-202ENST00000394114 TRBV6-1A0A0K0K1D8 114 aa4.37□□□□□ -1.71
CASC3-202ENST00000394114 IZUMO1RA6ND01 250 aa4.37□□□□□ -1.71
CASC3-202ENST00000394114 A8MWL6 223 aa4.37□□□□□ -1.71
CASC3-202ENST00000394114 ORM1P02763 201 aa4.37□□□□□ -1.71
CASC3-202ENST00000394114 ZNF138P52744 262 aa4.37□□□□□ -1.71
CASC3-202ENST00000394114 PSMG4Q5JS54 123 aa4.37□□□□□ -1.71
CASC3-202ENST00000394114 FAM162BQ5T6X4 162 aa4.37□□□□□ -1.71
CASC3-202ENST00000394114 GDF5OSQ5U4N7 250 aa4.37□□□□□ -1.71
CASC3-202ENST00000394114 FER1L6-AS1Q8NA97 138 aa4.37□□□□□ -1.71
CASC3-202ENST00000394114 DCANP1Q8TF63 244 aa4.37□□□□□ -1.71
CASC3-202ENST00000394114 RNF114Q9Y508 228 aa4.37□□□□□ -1.71
CASC3-202ENST00000394114 PKD1L1Q8TDX9 2849 aa4.37□□□□□ -1.71
CASC3-202ENST00000394114 A0A087WX48 190 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 TMEM189A5PLL7 270 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 PRR9Q5T870 116 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 LINC01561Q8N1V8 128 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 LAMTOR2Q9Y2Q5 125 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 TRAV9-1A0A075B6T8 112 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 TINCRA0A1B0GVN0 87 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 LGALS9O00182 355 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 CDK2AP2O75956 126 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 ARMS2P0C7Q2 107 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 NTF3P20783 257 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 RPL24P83731 157 aaKnown RBP4.36□□□□□ -1.71
CASC3-202ENST00000394114 NSUN5P1Q3KNT7 163 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 TMEM136Q6ZRR5 245 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 OR10J6PQ8NGY7 276 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 MIEN1Q9BRT3 115 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 ERG28Q9UKR5 140 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 PKIGQ9Y2B9 76 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 RBAKDNA6NC62 111 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 C9orf47Q6ZRZ4 202 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 Q6ZVQ6 151 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 GTF2H5Q6ZYL4 71 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 OR8A1Q8NGG7 326 aa4.36□□□□□ -1.71
CASC3-202ENST00000394114 F2Z2F3 143 aa4.35□□□□□ -1.71
CASC3-202ENST00000394114 OR10J3Q5JRS4 329 aa4.35□□□□□ -1.71
CASC3-202ENST00000394114 TMEM61Q8N0U2 210 aa4.35□□□□□ -1.71
CASC3-202ENST00000394114 OR4B1Q8NGF8 309 aa4.35□□□□□ -1.71
CASC3-202ENST00000394114 DYNLRB2Q8TF09 96 aa4.35□□□□□ -1.71
CASC3-202ENST00000394114 LINC00477Q96M19 166 aa4.35□□□□□ -1.71
CASC3-202ENST00000394114 C16orf95Q9H693 158 aa4.35□□□□□ -1.71
CASC3-202ENST00000394114 FABP5P3A8MUU1 101 aa4.35□□□□□ -1.71
CASC3-202ENST00000394114 K7EQG2 157 aa4.35□□□□□ -1.71
CASC3-202ENST00000394114 OVOL1O14753 267 aa4.35□□□□□ -1.71
CASC3-202ENST00000394114 RPL35AP18077 110 aaKnown RBP4.35□□□□□ -1.71
CASC3-202ENST00000394114 RNASE4P34096 147 aaKnown RBP4.35□□□□□ -1.71
CASC3-202ENST00000394114 IQCJQ1A5X6 159 aa4.35□□□□□ -1.71
CASC3-202ENST00000394114 LYZL1Q6UWQ5 148 aa4.35□□□□□ -1.71
CASC3-202ENST00000394114 GNB1LQ9BYB4 327 aa4.35□□□□□ -1.71
CASC3-202ENST00000394114 MAP1LC3AQ9H492 121 aa4.35□□□□□ -1.71
CASC3-202ENST00000394114 MRPL16Q9NX20 251 aaKnown RBP4.35□□□□□ -1.71
CASC3-202ENST00000394114 TIMM8BQ9Y5J9 83 aaPredicted RBP4.35□□□□□ -1.71
CASC3-202ENST00000394114 NOTCH1P46531 2555 aa4.34□□□□□ -1.71
CASC3-202ENST00000394114 APCSP02743 223 aa4.34□□□□□ -1.71
CASC3-202ENST00000394114 GPX1P07203 203 aa4.34□□□□□ -1.71
CASC3-202ENST00000394114 SRIP30626 198 aa4.34□□□□□ -1.71
CASC3-202ENST00000394114 FOXA3P55318 350 aaPredicted RBP4.34□□□□□ -1.71
CASC3-202ENST00000394114 PROK1P58294 105 aa4.34□□□□□ -1.71
CASC3-202ENST00000394114 KRTAP10-3P60369 221 aa4.34□□□□□ -1.71
CASC3-202ENST00000394114 SNRPD3P62318 126 aaKnown RBP4.34□□□□□ -1.71
CASC3-202ENST00000394114 HBBP68871 147 aa4.34□□□□□ -1.71
CASC3-202ENST00000394114 ODF3L2Q3SX64 289 aa4.34□□□□□ -1.71
CASC3-202ENST00000394114 APRG1Q8IVJ8 170 aa4.34□□□□□ -1.71
CASC3-202ENST00000394114 TMEM256Q8N2U0 113 aa4.34□□□□□ -1.71
CASC3-202ENST00000394114 ANAPC13Q9BS18 74 aa4.34□□□□□ -1.71
CASC3-202ENST00000394114 C1QTNF4Q9BXJ3 329 aa4.34□□□□□ -1.71
CASC3-202ENST00000394114 IGKV3D-20A0A0C4DH25 116 aa4.34□□□□□ -1.72
CASC3-202ENST00000394114 A0A1B0GUT8 65 aa4.34□□□□□ -1.72
CASC3-202ENST00000394114 A0A1B0GXF2 115 aa4.34□□□□□ -1.72
CASC3-202ENST00000394114 HLA-DQA1P01909 254 aa4.34□□□□□ -1.72
CASC3-202ENST00000394114 CRISP2P16562 243 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms