RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 NAV2Q8IVL1 2488 aa5.35□□□□□ -1.55
SMAD1-202ENST00000394092 UTP20O75691 2785 aaKnown RBP5.35□□□□□ -1.55
SMAD1-202ENST00000394092 ZFYVE26Q68DK2 2539 aa5.35□□□□□ -1.55
SMAD1-202ENST00000394092 PTPN13Q12923 2485 aa5.34□□□□□ -1.55
SMAD1-202ENST00000394092 TRBV6-5A0A0K0K1A5 114 aa5.34□□□□□ -1.55
SMAD1-202ENST00000394092 A8MTW9 85 aa5.34□□□□□ -1.55
SMAD1-202ENST00000394092 IGKV3-20P01619 116 aa5.34□□□□□ -1.55
SMAD1-202ENST00000394092 SLURP1P55000 103 aa5.34□□□□□ -1.55
SMAD1-202ENST00000394092 LINC00315P59091 139 aa5.34□□□□□ -1.55
SMAD1-202ENST00000394092 ZNF56Q15929 161 aa5.34□□□□□ -1.55
SMAD1-202ENST00000394092 SPINK13Q1W4C9 94 aa5.34□□□□□ -1.55
SMAD1-202ENST00000394092 ADAMTSL5Q6ZMM2 481 aa5.34□□□□□ -1.55
SMAD1-202ENST00000394092 PCP2Q8IVA1 136 aa5.34□□□□□ -1.55
SMAD1-202ENST00000394092 Q8N1Y9 231 aa5.34□□□□□ -1.55
SMAD1-202ENST00000394092 OR11H1Q8NG94 326 aa5.34□□□□□ -1.55
SMAD1-202ENST00000394092 KRTAP4-12Q9BQ66 201 aa5.34□□□□□ -1.55
SMAD1-202ENST00000394092 AGRNO00468 2067 aa5.34□□□□□ -1.56
SMAD1-202ENST00000394092 TRAV12-2A0A075B6T6 113 aa5.34□□□□□ -1.56
SMAD1-202ENST00000394092 H3BRM9 83 aa5.34□□□□□ -1.56
SMAD1-202ENST00000394092 POLR2KP53803 58 aaKnown RBP5.34□□□□□ -1.56
SMAD1-202ENST00000394092 SCGB2A2Q13296 93 aa5.34□□□□□ -1.56
SMAD1-202ENST00000394092 AMTNQ6UX39 209 aa5.34□□□□□ -1.56
SMAD1-202ENST00000394092 TRPT1Q86TN4 253 aaKnown RBP5.34□□□□□ -1.56
SMAD1-202ENST00000394092 GTSCR1Q86UQ5 136 aa5.34□□□□□ -1.56
SMAD1-202ENST00000394092 NEXN-AS1Q8NBZ9 246 aa5.34□□□□□ -1.56
SMAD1-202ENST00000394092 KLHL30-AS1Q8NEE0 82 aa5.34□□□□□ -1.56
SMAD1-202ENST00000394092 OR4C5Q8NGB2 326 aa5.34□□□□□ -1.56
SMAD1-202ENST00000394092 TMEM141Q96I45 108 aa5.34□□□□□ -1.56
SMAD1-202ENST00000394092 JMJD8Q96S16 334 aa5.34□□□□□ -1.56
SMAD1-202ENST00000394092 FBN2P35556 2912 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 A0A087WWL8 130 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 TRBV27A0A0K0K1C4 114 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 SDHAF1A6NFY7 115 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 CBY3A6NI87 242 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 OR11H12B2RN74 326 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 SPRY2O43597 315 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 RIPPLY3P57055 190 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 TCTAP57738 103 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 DEFB131AP59861 70 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 RHOHQ15669 191 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 TAL2Q16559 108 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 DEFB136Q30KP8 78 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 PIK3CD-AS1Q5SR53 167 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 FAM74A4Q5TZK3 123 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 ZFP2Q6ZN57 461 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 OR11H2Q8NH07 326 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 BAALCQ8WXS3 180 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 RAX2Q96IS3 184 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 TIMM17AQ99595 171 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 SPAG8Q99932 426 aaPredicted RBP5.33□□□□□ -1.56
SMAD1-202ENST00000394092 CHAC1Q9BUX1 264 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 ZNF256Q9Y2P7 627 aaPredicted RBP5.33□□□□□ -1.56
SMAD1-202ENST00000394092 POLQO75417 2590 aa5.33□□□□□ -1.56
SMAD1-202ENST00000394092 IGKV2D-26A0A0A0MRZ7 120 aa5.32□□□□□ -1.56
SMAD1-202ENST00000394092 TRAV25A0A0B4J276 109 aa5.32□□□□□ -1.56
SMAD1-202ENST00000394092 DNAJC9-AS1A6NH13 148 aa5.32□□□□□ -1.56
SMAD1-202ENST00000394092 HERVK_113P61574 105 aa5.32□□□□□ -1.56
SMAD1-202ENST00000394092 ZNF415Q09FC8 603 aa5.32□□□□□ -1.56
SMAD1-202ENST00000394092 NSUN5P1Q3KNT7 163 aa5.32□□□□□ -1.56
SMAD1-202ENST00000394092 ZNF876PQ49A33 203 aa5.32□□□□□ -1.56
SMAD1-202ENST00000394092 EDA2RQ9HAV5 297 aa5.32□□□□□ -1.56
SMAD1-202ENST00000394092 MDFICQ9P1T7 246 aa5.32□□□□□ -1.56
SMAD1-202ENST00000394092 TP53TG1Q9Y2A0 90 aa5.32□□□□□ -1.56
SMAD1-202ENST00000394092 MAP1AP78559 2803 aaPredicted RBP5.31□□□□□ -1.56
SMAD1-202ENST00000394092 TRBV25-1A0A075B6N4 114 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 C9orf118A6NHY6 69 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 H3BMM0 161 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 CCL25O15444 150 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 Q6ZSV7 163 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 C18orf65Q6ZTR6 163 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 Q6ZVH6 145 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 GTF2H5Q6ZYL4 71 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 TMEM61Q8N0U2 210 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 LINC00467Q9BRT7 94 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 KRTAP9-9Q9BYP9 154 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 KRTAP9-4Q9BYQ2 154 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 JPT2Q9H910 190 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 TRAV8-6A0A0B4J262 113 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 PRSS29PA6NIE9 313 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 KNCNA6PVL3 124 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 A8MWV9 139 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 E9PLD3 99 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 M0QY20 66 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 INSP01308 110 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 CRYGDP07320 174 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 GCSHP23434 173 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 PMVKQ15126 192 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 WFDC11Q8NEX6 87 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 DLX4Q92988 240 aaPredicted RBP5.31□□□□□ -1.56
SMAD1-202ENST00000394092 PTH2Q96A98 100 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 CLUHP3Q96NS8 147 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 DUX3Q96PT4 197 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 MAP6D1Q9H9H5 199 aa5.31□□□□□ -1.56
SMAD1-202ENST00000394092 ABCA12Q86UK0 2595 aa5.3□□□□□ -1.56
SMAD1-202ENST00000394092 MYMXA0A1B0GTQ4 84 aa5.3□□□□□ -1.56
SMAD1-202ENST00000394092 IGIPA6NJ69 53 aa5.3□□□□□ -1.56
SMAD1-202ENST00000394092 I3L3M4 83 aa5.3□□□□□ -1.56
SMAD1-202ENST00000394092 M0R2P5 195 aa5.3□□□□□ -1.56
SMAD1-202ENST00000394092 RHODO00212 210 aa5.3□□□□□ -1.56
SMAD1-202ENST00000394092 SMIM13P0DJ93 91 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms