RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 LOC107984156A0A0G2JMH3 177 aa14.5□□□□□ -0.09
CCDC50-202ENST00000392456 LOC389332A0A1B0GUA5 103 aa14.5□□□□□ -0.09
CCDC50-202ENST00000392456 ARL17AQ8IVW1 177 aa14.5□□□□□ -0.09
CCDC50-202ENST00000392456 FAM110DQ8TAY7 271 aaPredicted RBP14.5□□□□□ -0.09
CCDC50-202ENST00000392456 TRGV9Q99603 122 aa14.5□□□□□ -0.09
CCDC50-202ENST00000392456 EDA2RQ9HAV5 297 aa14.5□□□□□ -0.09
CCDC50-202ENST00000392456 C9orf139Q6ZV77 190 aa14.5□□□□□ -0.09
CCDC50-202ENST00000392456 ORM2P19652 201 aa14.49□□□□□ -0.09
CCDC50-202ENST00000392456 C19orf54Q5BKX5 351 aa14.49□□□□□ -0.09
CCDC50-202ENST00000392456 TCL1BO95988 128 aa14.49□□□□□ -0.09
CCDC50-202ENST00000392456 IGKCP01834 107 aa14.49□□□□□ -0.09
CCDC50-202ENST00000392456 IGLC6P0CF74 106 aa14.49□□□□□ -0.09
CCDC50-202ENST00000392456 HERVK_113P63121 156 aa14.49□□□□□ -0.09
CCDC50-202ENST00000392456 LYRM7Q5U5X0 104 aa14.49□□□□□ -0.09
CCDC50-202ENST00000392456 Q6YL49 198 aa14.49□□□□□ -0.09
CCDC50-202ENST00000392456 EPDR1Q9UM22 224 aa14.49□□□□□ -0.09
CCDC50-202ENST00000392456 LINC01549A6NIU2 74 aa14.48□□□□□ -0.09
CCDC50-202ENST00000392456 IGHG2P01859 326 aa14.48□□□□□ -0.09
CCDC50-202ENST00000392456 EMP1P54849 157 aa14.48□□□□□ -0.09
CCDC50-202ENST00000392456 TRAV41A0A0B4J266 112 aa14.48□□□□□ -0.09
CCDC50-202ENST00000392456 H3BVH4 76 aa14.48□□□□□ -0.09
CCDC50-202ENST00000392456 PYYP10082 97 aa14.48□□□□□ -0.09
CCDC50-202ENST00000392456 ZC2HC1BQ5TFG8 222 aa14.48□□□□□ -0.09
CCDC50-202ENST00000392456 TRAV8-1A0A0A6YYK1 113 aa14.47□□□□□ -0.09
CCDC50-202ENST00000392456 SCGB1C2P0DMR2 95 aa14.47□□□□□ -0.09
CCDC50-202ENST00000392456 GNG5P63218 68 aa14.47□□□□□ -0.09
CCDC50-202ENST00000392456 C15orf32Q32M92 178 aa14.47□□□□□ -0.09
CCDC50-202ENST00000392456 WFDC3Q8IUB2 231 aa14.47□□□□□ -0.09
CCDC50-202ENST00000392456 M0R2P5 195 aa14.47□□□□□ -0.09
CCDC50-202ENST00000392456 ZNF493Q6ZR52 646 aa14.47□□□□□ -0.09
CCDC50-202ENST00000392456 SMR3AQ99954 134 aa14.47□□□□□ -0.09
CCDC50-202ENST00000392456 A0A1B0GUT8 65 aa14.46□□□□□ -0.09
CCDC50-202ENST00000392456 C9orf153Q5TBE3 101 aa14.46□□□□□ -0.09
CCDC50-202ENST00000392456 SFTA2Q6UW10 78 aa14.46□□□□□ -0.09
CCDC50-202ENST00000392456 SETD2Q9BYW2 2564 aaPredicted RBP14.46□□□□□ -0.1
CCDC50-202ENST00000392456 COX7A2P2O60397 106 aa14.46□□□□□ -0.1
CCDC50-202ENST00000392456 NPYP01303 97 aa14.46□□□□□ -0.1
CCDC50-202ENST00000392456 IGF1P05019 195 aa14.46□□□□□ -0.1
CCDC50-202ENST00000392456 PAXXQ9BUH6 204 aa14.46□□□□□ -0.1
CCDC50-202ENST00000392456 C10orf113Q5VZT2 155 aa14.45□□□□□ -0.1
CCDC50-202ENST00000392456 IGHV3-35A0A0C4DH35 117 aa14.44□□□□□ -0.1
CCDC50-202ENST00000392456 ARMS2P0C7Q2 107 aa14.44□□□□□ -0.1
CCDC50-202ENST00000392456 RIGQ13278 110 aa14.44□□□□□ -0.1
CCDC50-202ENST00000392456 LINC00305Q7Z4B0 112 aa14.44□□□□□ -0.1
CCDC50-202ENST00000392456 CTSGP08311 255 aa14.44□□□□□ -0.1
CCDC50-202ENST00000392456 MYCNOSP40205 109 aa14.44□□□□□ -0.1
CCDC50-202ENST00000392456 CRIP2P52943 208 aaPredicted RBP14.44□□□□□ -0.1
CCDC50-202ENST00000392456 ZNRF2Q8NHG8 242 aa14.44□□□□□ -0.1
CCDC50-202ENST00000392456 U3KQK5 164 aa14.44□□□□□ -0.1
CCDC50-202ENST00000392456 TNFRSF6BO95407 300 aa14.43□□□□□ -0.1
CCDC50-202ENST00000392456 LYZP61626 148 aa14.43□□□□□ -0.1
CCDC50-202ENST00000392456 KLK9Q2XQG4 91 aa14.43□□□□□ -0.1
CCDC50-202ENST00000392456 KLK15Q9H2R5 256 aa14.43□□□□□ -0.1
CCDC50-202ENST00000392456 KLK9Q9UKQ9 250 aa14.43□□□□□ -0.1
CCDC50-202ENST00000392456 HIVEP1P15822 2718 aa14.43□□□□□ -0.1
CCDC50-202ENST00000392456 UBE2D1P51668 147 aa14.43□□□□□ -0.1
CCDC50-202ENST00000392456 C3orf22Q8N5N4 141 aa14.43□□□□□ -0.1
CCDC50-202ENST00000392456 FXYD5Q96DB9 178 aa14.43□□□□□ -0.1
CCDC50-202ENST00000392456 HIVEP2P31629 2446 aa14.43□□□□□ -0.1
CCDC50-202ENST00000392456 D6R8Y8 96 aa14.42□□□□□ -0.1
CCDC50-202ENST00000392456 DPM2O94777 84 aa14.42□□□□□ -0.1
CCDC50-202ENST00000392456 CCDC140Q96MF4 163 aa14.42□□□□□ -0.1
CCDC50-202ENST00000392456 KLK5Q9Y337 293 aaPredicted RBP14.42□□□□□ -0.1
CCDC50-202ENST00000392456 IGHV3OR16-8A0A075B7F1 116 aa14.42□□□□□ -0.1
CCDC50-202ENST00000392456 C10orf99Q6UWK7 81 aa14.42□□□□□ -0.1
CCDC50-202ENST00000392456 C10orf126Q8N4M7 172 aa14.41□□□□□ -0.1
CCDC50-202ENST00000392456 ZNF491Q8N8L2 437 aa14.41□□□□□ -0.1
CCDC50-202ENST00000392456 SLC25A20O43772 301 aa14.41□□□□□ -0.1
CCDC50-202ENST00000392456 TRAV8-4A0A0B4J246 113 aa14.4□□□□□ -0.1
CCDC50-202ENST00000392456 CD7P09564 240 aa14.4□□□□□ -0.1
CCDC50-202ENST00000392456 CLEC19AQ6UXS0 136 aa14.4□□□□□ -0.1
CCDC50-202ENST00000392456 Q8N1Y9 231 aa14.4□□□□□ -0.1
CCDC50-202ENST00000392456 TRAV2A0A0B4J234 112 aa14.4□□□□□ -0.1
CCDC50-202ENST00000392456 TRGV3P03979 118 aa14.39□□□□□ -0.11
CCDC50-202ENST00000392456 TWIST1Q15672 202 aa14.39□□□□□ -0.11
CCDC50-202ENST00000392456 TRBV7-7A0A0K0K1E9 115 aa14.38□□□□□ -0.11
CCDC50-202ENST00000392456 RNF125Q96EQ8 232 aa14.38□□□□□ -0.11
CCDC50-202ENST00000392456 SETXQ7Z333 2677 aaKnown RBP14.38□□□□□ -0.11
CCDC50-202ENST00000392456 CFHR3Q02985 330 aa14.38□□□□□ -0.11
CCDC50-202ENST00000392456 TRPT1Q86TN4 253 aaKnown RBP14.38□□□□□ -0.11
CCDC50-202ENST00000392456 LINC00526Q96FQ7 95 aa14.38□□□□□ -0.11
CCDC50-202ENST00000392456 DUX3Q96PT4 197 aa14.38□□□□□ -0.11
CCDC50-202ENST00000392456 SPANXCQ9NY87 97 aa14.38□□□□□ -0.11
CCDC50-202ENST00000392456 UQCRQO14949 82 aa14.37□□□□□ -0.11
CCDC50-202ENST00000392456 TRBV12-3P01733 135 aa14.37□□□□□ -0.11
CCDC50-202ENST00000392456 PRSS1P07477 247 aa14.37□□□□□ -0.11
CCDC50-202ENST00000392456 FMC1Q96HJ9 113 aa14.37□□□□□ -0.11
CCDC50-202ENST00000392456 SLC25A39Q9BZJ4 359 aaPredicted RBP14.37□□□□□ -0.11
CCDC50-202ENST00000392456 H3BTX0 84 aa14.37□□□□□ -0.11
CCDC50-202ENST00000392456 IGHV3-11P01762 117 aa14.37□□□□□ -0.11
CCDC50-202ENST00000392456 ORMDL3Q8N138 153 aa14.37□□□□□ -0.11
CCDC50-202ENST00000392456 ZNF702PQ9H963 129 aa14.37□□□□□ -0.11
CCDC50-202ENST00000392456 RBAKDNA6NC62 111 aa14.36□□□□□ -0.11
CCDC50-202ENST00000392456 PGPA6NDG6 321 aa14.36□□□□□ -0.11
CCDC50-202ENST00000392456 IGLV1-40P01703 118 aa14.36□□□□□ -0.11
CCDC50-202ENST00000392456 NTN5Q8WTR8 489 aaPredicted RBP14.36□□□□□ -0.11
CCDC50-202ENST00000392456 AAMDCQ9H7C9 122 aa14.36□□□□□ -0.11
CCDC50-202ENST00000392456 ESM1Q9NQ30 184 aa14.36□□□□□ -0.11
CCDC50-202ENST00000392456 ATP5LO75964 103 aa14.35□□□□□ -0.11
CCDC50-202ENST00000392456 EEF1AKMT3Q96AZ1 226 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 230.6 ms