RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 KIAA1549LQ6ZVL6 1849 aa11.64□□□□□ -0.55
CCDC50-201ENST00000392455 IGKV1-16P04430 117 aa11.64□□□□□ -0.55
CCDC50-201ENST00000392455 Q96MF0 132 aa11.64□□□□□ -0.55
CCDC50-201ENST00000392455 PCNX3Q9H6A9 2034 aa11.63□□□□□ -0.55
CCDC50-201ENST00000392455 ZNF581Q9P0T4 197 aa11.63□□□□□ -0.55
CCDC50-201ENST00000392455 FAM110AQ9BQ89 295 aa11.63□□□□□ -0.55
CCDC50-201ENST00000392455 ZNRD1Q9P1U0 126 aa11.63□□□□□ -0.55
CCDC50-201ENST00000392455 A6NED7 52 aa11.62□□□□□ -0.55
CCDC50-201ENST00000392455 CLPSL2Q6UWE3 100 aa11.62□□□□□ -0.55
CCDC50-201ENST00000392455 NUP210LQ5VU65 1888 aa11.62□□□□□ -0.55
CCDC50-201ENST00000392455 TEX36Q5VZQ5 186 aa11.62□□□□□ -0.55
CCDC50-201ENST00000392455 Q9HAA7 133 aa11.62□□□□□ -0.55
CCDC50-201ENST00000392455 MLANAQ16655 118 aa11.62□□□□□ -0.55
CCDC50-201ENST00000392455 COX7BP24311 80 aa11.62□□□□□ -0.55
CCDC50-201ENST00000392455 ZC2HC1AQ96GY0 325 aa11.62□□□□□ -0.55
CCDC50-201ENST00000392455 IGHV3-38A0A0C4DH36 116 aa11.62□□□□□ -0.55
CCDC50-201ENST00000392455 GYPEP15421 78 aa11.62□□□□□ -0.55
CCDC50-201ENST00000392455 RNF144BQ7Z419 303 aa11.62□□□□□ -0.55
CCDC50-201ENST00000392455 COL4A6Q14031 1691 aa11.61□□□□□ -0.55
CCDC50-201ENST00000392455 PRR30Q53SZ7 412 aaPredicted RBP11.61□□□□□ -0.55
CCDC50-201ENST00000392455 PIFOQ8TCI5 191 aa11.61□□□□□ -0.55
CCDC50-201ENST00000392455 B3GALT5-AS1P59052 145 aa11.61□□□□□ -0.55
CCDC50-201ENST00000392455 RNF183Q96D59 192 aa11.6□□□□□ -0.55
CCDC50-201ENST00000392455 FOXI1Q12951 378 aa11.6□□□□□ -0.55
CCDC50-201ENST00000392455 TRAV26-2A0A0B4J265 109 aa11.6□□□□□ -0.55
CCDC50-201ENST00000392455 C10orf91Q5T1B1 145 aa11.6□□□□□ -0.55
CCDC50-201ENST00000392455 ALPK3Q96L96 1907 aa11.6□□□□□ -0.55
CCDC50-201ENST00000392455 ZNF747Q9BV97 191 aa11.6□□□□□ -0.55
CCDC50-201ENST00000392455 CCL24O00175 119 aa11.6□□□□□ -0.55
CCDC50-201ENST00000392455 MED14OSP0DP75 135 aa11.6□□□□□ -0.55
CCDC50-201ENST00000392455 AMTNQ6UX39 209 aa11.6□□□□□ -0.55
CCDC50-201ENST00000392455 LINC00479Q96M42 142 aa11.6□□□□□ -0.55
CCDC50-201ENST00000392455 VPREB3Q9UKI3 123 aa11.59□□□□□ -0.55
CCDC50-201ENST00000392455 ZNF106Q9H2Y7 1883 aaKnown RBP11.59□□□□□ -0.55
CCDC50-201ENST00000392455 IGLC1P0CG04 106 aa11.59□□□□□ -0.55
CCDC50-201ENST00000392455 MRPS36P82909 103 aaKnown RBP11.59□□□□□ -0.55
CCDC50-201ENST00000392455 IMUPQ9GZP8 106 aa11.59□□□□□ -0.55
CCDC50-201ENST00000392455 Q6ZS92 163 aa11.58□□□□□ -0.55
CCDC50-201ENST00000392455 NOTCH4Q99466 2003 aa11.58□□□□□ -0.56
CCDC50-201ENST00000392455 IGHV4-4A0A075B6R2 117 aa11.58□□□□□ -0.56
CCDC50-201ENST00000392455 CACNA1AO00555 2505 aa11.58□□□□□ -0.56
CCDC50-201ENST00000392455 C11orf86A6NJI1 115 aa11.58□□□□□ -0.56
CCDC50-201ENST00000392455 FXYD5Q96DB9 178 aa11.58□□□□□ -0.56
CCDC50-201ENST00000392455 ZNF706Q9Y5V0 76 aaPredicted RBP11.58□□□□□ -0.56
CCDC50-201ENST00000392455 C17orf82Q86X59 251 aaPredicted RBP11.57□□□□□ -0.56
CCDC50-201ENST00000392455 QRFPP83859 136 aa11.57□□□□□ -0.56
CCDC50-201ENST00000392455 RETNQ9HD89 108 aa11.57□□□□□ -0.56
CCDC50-201ENST00000392455 H7C423 109 aa11.57□□□□□ -0.56
CCDC50-201ENST00000392455 CRIPAKQ8N1N5 446 aa11.57□□□□□ -0.56
CCDC50-201ENST00000392455 A0A0G2JRQ6 117 aa11.56□□□□□ -0.56
CCDC50-201ENST00000392455 PRR20EP86478 221 aa11.56□□□□□ -0.56
CCDC50-201ENST00000392455 PRR20CP86479 221 aa11.56□□□□□ -0.56
CCDC50-201ENST00000392455 PRR20DP86480 221 aa11.56□□□□□ -0.56
CCDC50-201ENST00000392455 PRR20BP86481 221 aa11.56□□□□□ -0.56
CCDC50-201ENST00000392455 PRR20AP86496 221 aa11.56□□□□□ -0.56
CCDC50-201ENST00000392455 C5orf38Q86SI9 138 aa11.56□□□□□ -0.56
CCDC50-201ENST00000392455 IGHV2-5P01817 119 aa11.56□□□□□ -0.56
CCDC50-201ENST00000392455 NDUFV3P56181 108 aaKnown RBP11.56□□□□□ -0.56
CCDC50-201ENST00000392455 UFSP1Q6NVU6 142 aa11.56□□□□□ -0.56
CCDC50-201ENST00000392455 HHLA3Q9XRX5 114 aa11.56□□□□□ -0.56
CCDC50-201ENST00000392455 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.55□□□□□ -0.56
CCDC50-201ENST00000392455 IGKV2-29A2NJV5 120 aaPredicted RBP11.55□□□□□ -0.56
CCDC50-201ENST00000392455 E9PLD3 99 aa11.55□□□□□ -0.56
CCDC50-201ENST00000392455 LECT2O14960 151 aa11.55□□□□□ -0.56
CCDC50-201ENST00000392455 ACACBO00763 2458 aa11.54□□□□□ -0.56
CCDC50-201ENST00000392455 GATA1P15976 413 aaPredicted RBP11.54□□□□□ -0.56
CCDC50-201ENST00000392455 G3V318 75 aa11.54□□□□□ -0.56
CCDC50-201ENST00000392455 K7ENP7 123 aa11.54□□□□□ -0.56
CCDC50-201ENST00000392455 THSD7BQ9C0I4 1608 aa11.54□□□□□ -0.56
CCDC50-201ENST00000392455 VPREB1P12018 145 aa11.54□□□□□ -0.56
CCDC50-201ENST00000392455 SPAG11BQ08648 103 aa11.54□□□□□ -0.56
CCDC50-201ENST00000392455 Q6ZQT7 251 aa11.54□□□□□ -0.56
CCDC50-201ENST00000392455 PRB2P02812 416 aaPredicted RBP11.54□□□□□ -0.56
CCDC50-201ENST00000392455 INSL3P51460 131 aa11.54□□□□□ -0.56
CCDC50-201ENST00000392455 C16orf54Q6UWD8 224 aa11.54□□□□□ -0.56
CCDC50-201ENST00000392455 ZNF524Q96C55 264 aa11.54□□□□□ -0.56
CCDC50-201ENST00000392455 ANKHD1Q8IWZ3 2542 aaKnown RBP11.54□□□□□ -0.56
CCDC50-201ENST00000392455 TRBV10-1A0A0K0K1A3 114 aa11.53□□□□□ -0.56
CCDC50-201ENST00000392455 WI2-2373I1.2A0A1W2PRP0 233 aa11.53□□□□□ -0.56
CCDC50-201ENST00000392455 G3V4G9 280 aa11.53□□□□□ -0.56
CCDC50-201ENST00000392455 MPLKIPQ8TAP9 179 aa11.53□□□□□ -0.56
CCDC50-201ENST00000392455 KAAG1Q9UBP8 84 aa11.53□□□□□ -0.56
CCDC50-201ENST00000392455 GPR179Q6PRD1 2367 aa11.53□□□□□ -0.56
CCDC50-201ENST00000392455 Q8N9L7 120 aa11.53□□□□□ -0.56
CCDC50-201ENST00000392455 TOMM6Q96B49 74 aa11.53□□□□□ -0.56
CCDC50-201ENST00000392455 CYYR1Q96J86 154 aa11.53□□□□□ -0.56
CCDC50-201ENST00000392455 TTC28Q96AY4 2481 aa11.53□□□□□ -0.56
CCDC50-201ENST00000392455 A0A096LPF7 62 aa11.52□□□□□ -0.56
CCDC50-201ENST00000392455 Q6ZRM9 215 aa11.52□□□□□ -0.56
CCDC50-201ENST00000392455 GPHB5Q86YW7 130 aa11.52□□□□□ -0.56
CCDC50-201ENST00000392455 PTPRBP23467 1997 aa11.52□□□□□ -0.57
CCDC50-201ENST00000392455 HIST2H2BDQ6DRA6 164 aa11.52□□□□□ -0.57
CCDC50-201ENST00000392455 FOXL2NBQ6ZUU3 175 aa11.51□□□□□ -0.57
CCDC50-201ENST00000392455 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.5□□□□□ -0.57
CCDC50-201ENST00000392455 FAM19A3Q7Z5A8 133 aa11.5□□□□□ -0.57
CCDC50-201ENST00000392455 TRAV23DV6A0A075B6W5 121 aa11.5□□□□□ -0.57
CCDC50-201ENST00000392455 IGHV4OR15-8A0A075B7B6 117 aa11.5□□□□□ -0.57
CCDC50-201ENST00000392455 A0A087WW49 117 aa11.5□□□□□ -0.57
CCDC50-201ENST00000392455 RNASE13Q5GAN3 156 aaKnown RBP11.5□□□□□ -0.57
CCDC50-201ENST00000392455 C7orf33Q8WU49 177 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms