RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 TMEM256-PLSCR3K7ERE1 68 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 TAX1BP3O14907 124 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 CALUO43852 315 aaPredicted RBP-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 HPGDSO60760 199 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 HIST1H2BKO60814 126 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 IFNA16P05015 189 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 HIST1H2BJP06899 126 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 SMIM17P0DL12 118 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 SLC25A6P12236 298 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 TPT1P13693 172 aaKnown RBP-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 UCHL3P15374 230 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 ADCYAP1P18509 176 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 CDC34P49427 236 aaPredicted RBP-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 SULT1E1P49888 294 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 TMBIM6P55061 237 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 CCL18P55774 89 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 DAOAP59103 153 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 RPS20P60866 119 aaKnown RBP-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 B2MP61769 119 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 SNRPD2P62316 118 aaKnown RBP-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 MED21Q13503 144 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 PMAIP1Q13794 54 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 DNAL1Q4LDG9 190 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 ZNF818PQ6ZRF7 136 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 AHSA2Q719I0 299 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 TTC9CQ8N5M4 171 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 LGALS14Q8TCE9 139 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 SERPINB11Q96P15 392 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 AHSPQ9NZD4 102 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 NEO1Q92859 1461 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 SHANK2Q9UPX8 1470 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 KIAA0556O60303 1618 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 CDC42BPAQ5VT25 1732 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 FMN2Q9NZ56 1722 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 KIF13BQ9NQT8 1826 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 TRBV7-3A0A075B6L6 115 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 hCG_1818297A0A087WSY0 165 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 IGHV1-24A0A0C4DH33 117 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 PNMA8CA0A1B0GUJ8 204 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 TINCRA0A1B0GVN0 87 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 RAB19A4D1S5 217 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 LINC01546A6NGU7 62 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 EEF1E1-BLOC1S5C9J1V9 151 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 GOLGA8KD6RF30 607 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 PGRMC1O00264 195 aaKnown RBP-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 CXCL11O14625 94 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 CST8O60676 142 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 BAG2O95816 211 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 OTCP00480 354 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 HLA-DRAP01903 254 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 APOC3P02656 99 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 TTRP02766 147 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 MT-ND6P03923 174 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 CRHP06850 196 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 CXCL1P09341 107 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 OCMP0CE72 109 aaPredicted RBP-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 STMN1P16949 149 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 CLIP1P30622 1438 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 CDKN2CP42773 168 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 CRYBA4P53673 196 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 ARPP19P56211 112 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 PSME3P61289 254 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 DOCK1Q14185 1865 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 WRNQ14191 1432 aaPredicted RBP eCLIP-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 RSU1Q15404 277 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 MSMO1Q15800 293 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 Q3ZCU0 254 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 ZCCHC11Q5TAX3 1644 aaKnown RBP-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 C1orf195Q5TG92 126 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 FAM45BPQ6NSW5 357 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 XIRP1Q702N8 1843 aaKnown RBP-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 SBF2Q86WG5 1849 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 IFT20Q8IY31 132 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 NINQ8N4C6 2090 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 MORN4Q8NDC4 146 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 OR51A4Q8NGJ6 313 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 TMEM263Q8WUH6 116 aaKnown RBP-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 KIAA0232Q92628 1395 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 MCEEQ96PE7 176 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 DRC3Q9H069 523 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 RNASE7Q9H1E1 156 aaKnown RBP-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 TPT1P8Q9HAU6 139 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 IMP3Q9NV31 184 aaKnown RBP-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 CHMP5Q9NZZ3 219 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 METTL1Q9UBP6 276 aaKnown RBP-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 ENPP5Q9UJA9 477 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 STOML2Q9UJZ1 356 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 KIAA1107Q9UPP5 1409 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 DLEC1Q9Y238 1755 aa-1.02□□□□□ -2.57
TRAJ28-201ENST00000390509 KIAA1549LQ6ZVL6 1849 aa-1.03□□□□□ -2.57
TRAJ28-201ENST00000390509 KIF13AQ9H1H9 1805 aa-1.03□□□□□ -2.57
TRAJ28-201ENST00000390509 KDM3BQ7LBC6 1761 aa-1.03□□□□□ -2.57
TRAJ28-201ENST00000390509 CEP164Q9UPV0 1460 aa-1.03□□□□□ -2.57
TRAJ28-201ENST00000390509 PTPRGP23470 1445 aa-1.03□□□□□ -2.57
TRAJ28-201ENST00000390509 RIMS2Q9UQ26 1411 aa-1.03□□□□□ -2.57
TRAJ28-201ENST00000390509 RTL9Q8NET4 1388 aa-1.03□□□□□ -2.57
TRAJ28-201ENST00000390509 CCDC171Q6TFL3 1326 aa-1.03□□□□□ -2.57
TRAJ28-201ENST00000390509 CLPSL1A2RUU4 121 aa-1.03□□□□□ -2.57
TRAJ28-201ENST00000390509 K7EPI3 171 aa-1.03□□□□□ -2.57
TRAJ28-201ENST00000390509 K7ERJ3 54 aa-1.03□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms